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OP186293.1__UVD36482.1__RCXUPER_64__00035
Bact-VirOP186293.1__UVD36482.1__RCXUPER_64__00035
Identity
- Accession:
- OP186293 ↗
- Kingdom:
- phage
Quality
73.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-102
D2
medium
residues 104-180_274-301
Domain cluster:
rep: ON529853.1__UTC29511.1__BAMBUS_04320__00428__D1-82_559-593
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF09343.16 best | DUF2460 | 65.3 | 7.60e-18 | 73.3% | 36.8% |
D3
medium
residues 186-271
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF09343.16 best | DUF2460 | 55.0 | 1.10e-14 | 100.0% | 37.2% |
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2zuvA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.65 | 57.0 | 5.33e-01 | 100.0% | 79.2% |
| 6ea2A01 | 2.60.40.1730 | Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain | 0.62 | 57.0 | 4.36e-01 | 100.0% | 54.0% |
| 4igbB02 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.62 | 56.0 | 4.71e-01 | 100.0% | 60.1% |
| 2vbkA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.61 | 47.0 | 2.92e-01 | 100.0% | 13.9% |
| 3pf2A01 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.61 | 54.0 | 4.31e-01 | 100.0% | 64.0% |
| 1r17A02 | 2.60.40.1290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.60 | 52.0 | 4.34e-01 | 100.0% | 62.0% |
| 2k1mA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 47.0 | 4.61e-01 | 98.8% | 78.9% |
| 4ba0A04 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.60 | 52.0 | 4.33e-01 | 96.5% | 57.7% |
| 4fx5A01 | 2.60.40.3670 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 47.0 | 4.07e-01 | 100.0% | 53.5% |
| 2dm7A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 47.0 | 4.72e-01 | 98.8% | 85.2% |
| 4jx0A02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.59 | 53.0 | 4.49e-01 | 100.0% | 64.3% |
| 4ei0A01 | 2.60.40.3550 | Mainly Beta › Sandwich › Immunoglobulin-like › Domain of unknown function DUF4466 | 0.59 | 50.0 | 4.26e-01 | 100.0% | 58.2% |
| 1zvnA01 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.58 | 45.0 | 4.41e-01 | 95.3% | 77.7% |
| 2dltA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 46.0 | 4.31e-01 | 98.8% | 72.6% |
| 5ze3A02 | 3.10.250.10 | Alpha Beta › Roll › Mac-2 Binding Protein › SRCR-like domain | 0.57 | 40.0 | 3.78e-01 | 75.6% | 100.0% |
| 2eo1A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 46.0 | 4.40e-01 | 98.8% | 76.5% |
| 3wnkA04 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.56 | 48.0 | 4.23e-01 | 93.0% | 71.2% |
| 4d6gA03 | 2.60.220.10 | Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal | 0.56 | 45.0 | 3.95e-01 | 100.0% | 57.7% |
| 5axgA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.56 | 49.0 | 4.34e-01 | 97.7% | 76.2% |
| 3l4yA05 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.55 | 49.0 | 4.19e-01 | 98.8% | 78.3% |
| 2r15A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 44.0 | 4.06e-01 | 98.8% | 67.6% |
| 2rikA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 45.0 | 4.37e-01 | 98.8% | 82.1% |
| 7cymA04 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.55 | 46.0 | 4.50e-01 | 95.3% | 84.5% |
| 5jdjA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 44.0 | 4.36e-01 | 98.8% | 84.6% |
| 5joeA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 44.0 | 4.37e-01 | 98.8% | 84.8% |
| 6xw5A01 | 2.40.510.10 | Mainly Beta › Beta Barrel › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Positive stranded ssRNA viruses | 0.53 | 45.0 | 3.72e-01 | 98.8% | 96.0% |
| 5nn3A05 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.53 | 46.0 | 4.00e-01 | 95.3% | 77.3% |
| 2v5tA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 42.0 | 4.09e-01 | 98.8% | 79.8% |
| 7y9aA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 42.0 | 4.19e-01 | 98.8% | 88.5% |
| 2q1fA01 | 2.60.120.430 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin | 0.52 | 45.0 | 3.71e-01 | 98.8% | 88.0% |
| 3gmgA00 | 3.30.70.1880 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Protein of unknown function DUF881 | 0.52 | 43.0 | 3.73e-01 | 100.0% | 55.9% |
| 2x2uA01 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.52 | 45.0 | 4.14e-01 | 100.0% | 85.3% |
| 2cqvA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 42.0 | 3.93e-01 | 100.0% | 69.3% |
| 3r4dA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 40.0 | 4.01e-01 | 98.8% | 81.5% |
| 1o59A02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 44.0 | 3.86e-01 | 100.0% | 63.3% |
| 4u7mA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 40.0 | 3.91e-01 | 100.0% | 79.8% |
ECOD (51)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4957583 | 3386.2.1.0 ↗ | beta sandwiches › gp9 C-terminal domain-like › gp10 domain 2 and domain 3 › gp10 domain 2 and domain 3 | 0.86 | 66.0 | 7.33e-01 | 98.8% | 98.6% |
| 3978227 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.77 | 60.0 | 6.43e-01 | 100.0% | 94.7% |
| 4163669 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.66 | 49.0 | 4.32e-01 | 98.8% | 53.1% |
| 1837850 | 2002.1.1.160 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Lact_bio_phlase | 0.65 | 57.0 | 3.62e-01 | 100.0% | 18.9% |
| 5076974 | 12.1.1.34 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Glyco_hydro38C2 | 0.64 | 48.0 | 4.80e-01 | 100.0% | 76.7% |
| 4985742 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.63 | 43.0 | 4.20e-01 | 100.0% | 64.2% |
| 3278907 | 4081.1.1.12 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › DUF2207 | 0.63 | 48.0 | 3.94e-01 | 100.0% | 43.6% |
| 3276491 | 12.2.1.8 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Hyaluronate lyase-like, C-terminal domain › Hyaluronate lyase-like, C-terminal domain › UPF0556 | 0.61 | 49.0 | 4.32e-01 | 100.0% | 59.4% |
| 2581320 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 51.0 | 4.60e-01 | 100.0% | 95.2% |
| 3744032 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.58 | 51.0 | 4.34e-01 | 100.0% | 90.3% |
| 3264187 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 45.0 | 4.41e-01 | 97.7% | 77.9% |
| 3176910 | 11.1.1.151 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Candida_ALS_N | 0.57 | 50.0 | 4.14e-01 | 100.0% | 56.0% |
| 3510755 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.57 | 42.0 | 4.35e-01 | 91.9% | 86.3% |
| 3927750 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 50.0 | 4.58e-01 | 100.0% | 75.7% |
| 2387827 | 358.1.1.0 ↗ | a+b complex topology › SRCR-like › SRCR-like › SRCR-like | 0.56 | 42.0 | 3.80e-01 | 79.1% | 95.8% |
| 5078307 | 11.21.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein | 0.56 | 43.0 | 4.59e-01 | 94.2% | 97.3% |
| 3255497 | 12.3.1.46 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › ComC_SSD | 0.56 | 50.0 | 3.70e-01 | 100.0% | 52.4% |
| 1884534 | 11.1.1.56 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CBM_X2 | 0.56 | 48.0 | 4.71e-01 | 98.8% | 86.5% |
| 3400003 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.56 | 44.0 | 4.07e-01 | 98.8% | 67.3% |
| 3994330 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.55 | 41.0 | 4.11e-01 | 100.0% | 77.8% |
| 3290895 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.55 | 48.0 | 4.24e-01 | 100.0% | 66.9% |
| 3793482 | 7036.1.1.1 ↗ | beta barrels › N-terminal domain of TAP-binding protein-related › N-terminal domain of TAP-binding protein-related › N-terminal domain of TAP-binding protein-related › I-set | 0.55 | 42.0 | 3.82e-01 | 100.0% | 59.2% |
| 3997888 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.55 | 43.0 | 4.15e-01 | 98.8% | 75.0% |
| 3223216 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.54 | 42.0 | 3.97e-01 | 98.8% | 68.2% |
| 3235158 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.54 | 42.0 | 4.23e-01 | 100.0% | 83.3% |
| 3844167 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.54 | 42.0 | 3.41e-01 | 100.0% | 42.3% |
| 3903773 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.54 | 42.0 | 3.89e-01 | 98.8% | 65.2% |
| 3535997 | 12.5.1.2 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › GPS | 0.53 | 46.0 | 3.75e-01 | 96.5% | 50.3% |
| 3508267 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.53 | 42.0 | 4.04e-01 | 98.8% | 75.0% |
| 3481360 | 12.5.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related | 0.53 | 45.0 | 3.80e-01 | 97.7% | 63.9% |
| 3903768 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.53 | 43.0 | 4.30e-01 | 97.7% | 86.7% |
| 3600269 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.53 | 46.0 | 4.10e-01 | 98.8% | 90.4% |
| 3388571 | 11.1.1.3 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ig | 0.53 | 41.0 | 4.14e-01 | 100.0% | 83.3% |
| 3582793 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.53 | 40.0 | 4.04e-01 | 100.0% | 81.1% |
| 4003497 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.53 | 45.0 | 3.67e-01 | 100.0% | 49.4% |
| 1487334 | 5092.1.1.7 ↗ | beta sandwiches › Domain in virus attachment proteins › Domain in virus attachment proteins › Domain in virus attachment proteins › Fibre_HD | 0.53 | 44.0 | 4.05e-01 | 98.8% | 70.7% |
| 3541659 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.52 | 41.0 | 4.10e-01 | 100.0% | 84.4% |
| 3874738 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.52 | 41.0 | 3.70e-01 | 98.8% | 60.0% |
| 4000906 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.52 | 41.0 | 4.13e-01 | 98.8% | 84.4% |
| 3902617 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.52 | 41.0 | 4.05e-01 | 98.8% | 80.0% |
| 3875938 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.52 | 40.0 | 3.99e-01 | 100.0% | 82.2% |
| 3403812 | 10.21.1.1 ↗ | beta sandwiches › jelly-roll › Jelly-roll domain in ADAMTS13 › Jelly-roll domain in ADAMTS13 › ADAMTS_spacer1 | 0.52 | 44.0 | 3.95e-01 | 100.0% | 70.8% |
| 3515862 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.51 | 41.0 | 4.05e-01 | 98.8% | 84.4% |
| 3904625 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.51 | 44.0 | 4.13e-01 | 98.8% | 84.5% |
| 3274850 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 44.0 | 4.27e-01 | 98.8% | 89.5% |
| 4169889 | 239.1.1.15 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › CPxCG_zf | 0.51 | 33.0 | 3.57e-01 | 100.0% | 82.9% |
| 3531641 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.51 | 40.0 | 3.64e-01 | 100.0% | 63.3% |
| 3581640 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 44.0 | 4.15e-01 | 100.0% | 83.8% |
| 3544906 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.51 | 40.0 | 3.97e-01 | 100.0% | 82.1% |
| 3909590 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 42.0 | 4.07e-01 | 100.0% | 82.0% |
| 5065684 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.50 | 42.0 | 4.15e-01 | 94.2% | 100.0% |