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OP186293.1__UVD36490.1__RCXUPER_72__00043
Bact-VirOP186293.1__UVD36490.1__RCXUPER_72__00043
Identity
- Accession:
- OP186293 ↗
- Kingdom:
- phage
Quality
87.6
mean pLDDT
Cluster
View cluster (5 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 43-93
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4o6yB00 | 1.20.120.1770 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.63 | 43.0 | 2.87e-01 | 70.6% | 54.5% |
| 1f81A00 | 1.20.1020.10 | Mainly Alpha › Up-down Bundle › CREB-binding Protein; Chain A › TAZ domain | 0.62 | 46.0 | 3.94e-01 | 82.4% | 57.5% |
| 2aplA02 | 1.10.8.340 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › PG0816-like | 0.58 | 40.0 | 3.48e-01 | 72.5% | 53.1% |
| 3jsjC00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.57 | 46.0 | 3.32e-01 | 100.0% | 83.1% |
| 2qhoD00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.56 | 36.0 | 3.66e-01 | 82.4% | 67.3% |
| 1lp1A00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.55 | 40.0 | 3.90e-01 | 72.5% | 67.3% |
| 1sg6A02 | 1.20.1090.10 | Mainly Alpha › Up-down Bundle › Dehydroquinate synthase-like, alpha domain › Dehydroquinate synthase-like - alpha domain | 0.55 | 46.0 | 3.18e-01 | 100.0% | 39.6% |
| 4qclA05 | 1.10.132.60 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › B family DNA polymerase, thumb domain | 0.54 | 46.0 | 3.23e-01 | 94.1% | 86.9% |
| 5k7fA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.54 | 45.0 | 3.42e-01 | 100.0% | 47.1% |
| 4fvmA07 | 1.20.1280.310 | Mainly Alpha › Up-down Bundle › Monooxygenase › B family DNA polymerase, thumb domain, four helix bundle | 0.54 | 45.0 | 4.15e-01 | 94.1% | 92.3% |
| 3l6aA01 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.53 | 42.0 | 3.05e-01 | 100.0% | 45.8% |
| 3fvvA02 | 1.20.1440.100 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › SG protein - dephosphorylation function | 0.52 | 38.0 | 3.36e-01 | 78.4% | 70.7% |
| 5zr4A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 37.0 | 3.14e-01 | 84.3% | 45.1% |
| 6ruiB04 | 3.90.1110.10 | Alpha Beta › Alpha-Beta Complex › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; domain 3 › RNA polymerase Rpb2, domain 2 | 0.50 | 41.0 | 2.95e-01 | 100.0% | 67.6% |
| 1vi0A02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.50 | 40.0 | 3.07e-01 | 100.0% | 47.6% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3626761 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.66 | 53.0 | 3.31e-01 | 90.2% | 28.4% |
| 4013992 | 601.4.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains | 0.65 | 52.0 | 3.73e-01 | 90.2% | 58.7% |
| 3280735 | 191.1.1.0 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain | 0.62 | 53.0 | 4.03e-01 | 100.0% | 58.5% |
| 3651068 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.62 | 46.0 | 3.23e-01 | 76.5% | 28.2% |
| 5061858 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.59 | 48.0 | 3.53e-01 | 92.2% | 32.9% |
| 3691510 | 1128.1.1.0 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein | 0.58 | 40.0 | 3.20e-01 | 70.6% | 36.2% |
| 3345965 | 4982.1.1.3 ↗ | alpha arrays › KaiA/RbsU domain-like › KaiA/RbsU domain › KaiA/RbsU domain › Tic110 | 0.58 | 46.0 | 3.16e-01 | 96.1% | 23.5% |
| 3219669 | 548.1.1.1 ↗ | alpha duplicates or obligate multimers › GRIP domain › GRIP domain › GRIP domain › GRIP | 0.58 | 39.0 | 4.02e-01 | 72.5% | 78.0% |
| 3743404 | 220.1.1.256 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Red1 | 0.56 | 44.0 | 2.69e-01 | 92.2% | 12.6% |
| 4122775 | 632.3.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Phosphoprotein XD domain › Phosphoprotein XD domain | 0.56 | 39.0 | 4.15e-01 | 76.5% | 84.4% |
| 3606992 | 189.1.1.0 ↗ | alpha bundles › GTPase activation domain, GAP › GTPase activation domain, GAP › GTPase activation domain, GAP | 0.54 | 42.0 | 2.89e-01 | 92.2% | 34.9% |
| 3254545 | 103.11.1.0 ↗ | alpha arrays › RuvA-C › RMI1 N-terminal helical domain-related › RMI1 N-terminal helical domain-related | 0.54 | 40.0 | 3.91e-01 | 78.4% | 76.4% |
| 3340749 | 309.1.1.11 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › PqqF-like_C_4 | 0.53 | 45.0 | 2.95e-01 | 96.1% | 88.5% |
| 3252236 | 101.1.1.76 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Integrase_H2C2 | 0.52 | 40.0 | 3.93e-01 | 86.3% | 87.3% |
| 4112733 | 101.8.1.2 ↗ | alpha arrays › HTH › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › Anticodon_2 | 0.51 | 42.0 | 3.08e-01 | 98.0% | 58.1% |
| 3611539 | 4198.1.1.0 ↗ | alpha arrays › TerB-like › TerB-like › TerB-like | 0.50 | 39.0 | 2.86e-01 | 98.0% | 85.4% |