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OP263969.1__UXE02841.1__Koombakaat1_00051__00051

Bact-Vir

OP263969.1__UXE02841.1__Koombakaat1_00051__00051

Identity

Accession:
OP263969 ↗
Kingdom:
phage

Quality

89.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-71
PDB
CATH (39)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2qbuA02 3.30.950.10 Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain 0.63 34.0 3.04e-01 97.1% 37.5%
4aw7A01 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.63 39.0 3.34e-01 100.0% 37.3%
2avxA00 3.30.450.80 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain 0.63 44.0 3.36e-01 74.3% 94.2%
3lm4A01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.62 47.0 3.76e-01 82.9% 41.9%
5jh8A02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.62 46.0 4.67e-01 91.4% 83.6%
4dwsA01 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.61 47.0 3.97e-01 84.3% 57.7%
3bxwA03 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.61 44.0 4.79e-01 90.0% 100.0%
3qokA02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.61 50.0 4.53e-01 91.4% 100.0%
3oajA02 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.61 53.0 4.28e-01 100.0% 91.0%
1itxA02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.61 50.0 4.96e-01 94.3% 100.0%
1w9pA02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.60 48.0 5.04e-01 94.3% 100.0%
1goiA02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.59 49.0 4.62e-01 95.7% 100.0%
4kyzA00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.59 44.0 3.42e-01 81.4% 96.4%
3cz8A02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.59 44.0 4.75e-01 88.6% 100.0%
3alfA02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.59 49.0 4.90e-01 94.3% 100.0%
2i44B00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.58 48.0 3.15e-01 91.4% 59.8%
4njcA00 3.10.20.730 Alpha Beta › Roll › Ubiquitin-like (UB roll) › RNAP, epsilon subunit-like 0.57 39.0 4.19e-01 100.0% 85.0%
2jvfA00 3.30.1710.10 Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein 0.57 41.0 3.82e-01 100.0% 58.5%
1owqA02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.57 46.0 4.68e-01 91.4% 100.0%
5cm2Z00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.57 40.0 2.97e-01 74.3% 95.7%
5jtwA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 40.0 3.58e-01 100.0% 51.0%
4a18X01 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.57 43.0 4.16e-01 100.0% 74.7%
5dezA03 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.56 45.0 4.48e-01 94.3% 97.3%
2x3lA01 3.90.1150.150 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › 0.55 39.0 3.45e-01 74.3% 71.4%
1o54A02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.55 39.0 2.91e-01 75.7% 87.6%
1ddvA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 47.0 4.19e-01 98.6% 79.8%
1xe0C00 2.60.120.340 Mainly Beta › Sandwich › Jelly Rolls › Nucleoplasmin core domain 0.54 38.0 3.37e-01 100.0% 50.5%
2wssA01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.53 33.0 3.01e-01 91.4% 46.2%
1j5yA02 3.30.1340.20 Alpha Beta › 2-Layer Sandwich › Histidine-containing Protein; Chain: A; › 3H domain 0.53 39.0 3.51e-01 100.0% 54.2%
1rl2A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 33.0 3.64e-01 84.3% 80.4%
2qsdA01 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.53 38.0 3.95e-01 100.0% 82.1%
6cc0A01 3.30.450.80 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain 0.52 42.0 3.30e-01 91.4% 98.8%
1s3rA04 2.60.40.1430 Mainly Beta › Sandwich › Immunoglobulin-like › Perfringolysin, domain 4 0.52 34.0 2.97e-01 91.4% 41.4%
1txdA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 43.0 3.67e-01 97.1% 69.4%
3c9aA03 2.20.20.160 Mainly Beta › Single Sheet › Anthopleurin-A › 0.51 41.0 4.14e-01 100.0% 85.9%
2jxtA01 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.51 37.0 3.62e-01 100.0% 72.4%
1zxuA00 2.40.160.200 Mainly Beta › Beta Barrel › Porin › LURP1-related 0.51 41.0 3.24e-01 92.9% 95.7%
7r3eB02 3.30.450.80 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain 0.50 45.0 3.44e-01 100.0% 60.7%
2nmlA00 3.30.2260.10 Alpha Beta › 2-Layer Sandwich › ERH-like fold › Enhancer of rudimentary 0.50 43.0 3.92e-01 100.0% 77.0%
ECOD (51)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3623001 284.2.1.0 a+b two layers › FKBP-like › Chitinase insertion domain › Chitinase insertion domain 0.68 58.0 5.65e-01 97.1% 98.8%
3999354 386.1.1.1 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 0.65 29.0 2.23e-01 80.0% 17.4%
3338688 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.63 49.0 5.11e-01 100.0% 93.8%
4013690 284.2.1.0 a+b two layers › FKBP-like › Chitinase insertion domain › Chitinase insertion domain 0.62 45.0 4.90e-01 98.6% 98.2%
4232129 211.1.1.0 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.62 47.0 3.89e-01 81.4% 49.6%
5010552 264.2.1.0 beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.62 57.0 4.56e-01 100.0% 96.2%
4261505 284.2.1.0 a+b two layers › FKBP-like › Chitinase insertion domain › Chitinase insertion domain 0.61 50.0 5.15e-01 90.0% 100.0%
4292753 264.2.1.0 beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.61 55.0 4.97e-01 100.0% 98.9%
1806486 284.2.1.0 a+b two layers › FKBP-like › Chitinase insertion domain › Chitinase insertion domain 0.61 45.0 4.78e-01 92.9% 100.0%
2105165 284.2.1.0 a+b two layers › FKBP-like › Chitinase insertion domain › Chitinase insertion domain 0.60 49.0 4.95e-01 91.4% 100.0%
5036765 264.2.1.0 beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.60 54.0 4.78e-01 100.0% 98.0%
3829628 284.2.1.0 a+b two layers › FKBP-like › Chitinase insertion domain › Chitinase insertion domain 0.60 48.0 4.63e-01 90.0% 81.2%
6500 284.2.1.1 a+b two layers › FKBP-like › Chitinase insertion domain › Chitinase insertion domain › Glyco_hydro_18 0.59 47.0 4.74e-01 92.9% 100.0%
5070755 264.2.1.0 beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.59 53.0 4.40e-01 100.0% 98.3%
3559030 2002.1.1.30 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.58 50.0 3.27e-01 100.0% 85.2%
4500525 284.2.1.0 a+b two layers › FKBP-like › Chitinase insertion domain › Chitinase insertion domain 0.58 42.0 4.59e-01 88.6% 100.0%
4115593 2002.1.1.30 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.58 50.0 3.29e-01 100.0% 26.2%
3961969 3097.1.1.1 a+b two layers › Ribosome-associated factor Y › Ribosome-associated factor Y › Ribosome-associated factor Y › Ribosom_S30AE_C 0.58 34.0 3.60e-01 84.3% 65.0%
3319159 284.2.1.1 a+b two layers › FKBP-like › Chitinase insertion domain › Chitinase insertion domain › Glyco_hydro_18 0.57 50.0 4.00e-01 100.0% 56.6%
3759995 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.57 46.0 3.06e-01 90.0% 22.3%
3954395 3097.1.1.0 a+b two layers › Ribosome-associated factor Y › Ribosome-associated factor Y › Ribosome-associated factor Y 0.57 31.0 3.45e-01 78.6% 65.5%
3961965 3097.1.1.1 a+b two layers › Ribosome-associated factor Y › Ribosome-associated factor Y › Ribosome-associated factor Y › Ribosom_S30AE_C 0.57 34.0 3.49e-01 84.3% 61.5%
2530280 284.2.1.0 a+b two layers › FKBP-like › Chitinase insertion domain › Chitinase insertion domain 0.56 44.0 4.61e-01 91.4% 100.0%
4226159 284.2.1.0 a+b two layers › FKBP-like › Chitinase insertion domain › Chitinase insertion domain 0.56 44.0 4.32e-01 88.6% 100.0%
3225850 284.2.1.0 a+b two layers › FKBP-like › Chitinase insertion domain › Chitinase insertion domain 0.56 38.0 4.09e-01 91.4% 100.0%
1503409 220.3.1.1 beta barrels › PH domain-like › first barrel domain in viral glycoproteins › first barrel domain in viral glycoproteins › Rhabdo_glycop 0.56 48.0 3.93e-01 97.1% 92.4%
2530276 2002.1.1.30 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.56 47.0 3.15e-01 100.0% 26.7%
4999659 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.56 36.0 4.02e-01 100.0% 97.9%
4410522 223.1.1.7 a+b three layers › Profilin-like › sensor domains › sensor domains › Autoind_bind 0.55 41.0 3.20e-01 81.4% 93.9%
4939739 3115.1.1.1 a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.55 38.0 4.07e-01 100.0% 88.1%
3222254 304.9.1.40 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › BRAP2 0.55 48.0 4.06e-01 100.0% 70.6%
1839421 2002.1.1.30 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.55 47.0 3.11e-01 100.0% 25.6%
3910066 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.54 43.0 4.18e-01 88.6% 80.0%
4996063 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.54 35.0 3.62e-01 100.0% 72.3%
3478358 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 48.0 3.93e-01 100.0% 55.2%
4942338 815.1.1.1 a+b two layers › Chromosomal protein MC1 › Chromosomal protein MC1 › Chromosomal protein MC1 › MC1 0.53 36.0 3.28e-01 100.0% 51.0%
4410540 3321.1.1.1 a+b two layers › Meander beta sheet domain in fatty acid synthase subunit beta › Meander beta sheet domain in fatty acid synthase subunit beta › Meander beta sheet domain in fatty acid synthase subunit beta › FAS_meander 0.52 38.0 3.66e-01 100.0% 65.9%
5077064 2002.1.1.30 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.52 45.0 3.01e-01 100.0% 94.4%
3274047 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.52 35.0 3.18e-01 98.6% 49.0%
3926450 2004.1.1.230 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Tsr1_G-like 0.52 40.0 3.19e-01 90.0% 37.1%
943 220.1.1.47 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_16 0.52 43.0 3.87e-01 95.7% 83.0%
4990637 3115.1.1.1 a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.52 39.0 3.70e-01 100.0% 68.7%
4472409 223.1.1.7 a+b three layers › Profilin-like › sensor domains › sensor domains › Autoind_bind 0.52 41.0 3.20e-01 91.4% 93.5%
3968301 244.1.1.6 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › Amino_oxidase 0.51 43.0 3.91e-01 98.6% 97.0%
4136892 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.51 38.0 3.73e-01 82.9% 72.5%
3591994 304.103.1.0 a+b two layers › Alpha-beta plaits › FMN-dependent nitroreductase-like › FMN-dependent nitroreductase-like 0.51 41.0 3.13e-01 92.9% 76.8%
2648304 11.1.1.158 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GldM_4th 0.51 32.0 2.82e-01 100.0% 37.8%
3277617 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.51 38.0 3.45e-01 85.7% 83.8%
3733487 10.12.1.53 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_3 0.51 37.0 2.74e-01 81.4% 84.3%
3837276 211.1.1.1 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase 0.50 37.0 3.87e-01 87.1% 87.7%
4602886 221.3.1.0 a+b two layers › beta-Grasp › Immunoglobulin-binding domains › Immunoglobulin-binding domains 0.50 39.0 3.92e-01 88.6% 100.0%
D2 high residues 80-129
PDB
Domain cluster: representative
CATH (70)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1kq1H00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.76 52.0 4.75e-01 72.0% 77.3%
4f7uF00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.76 53.0 4.67e-01 74.0% 84.9%
4m7dA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.75 51.0 4.71e-01 72.0% 90.8%
2ra2B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.74 54.0 5.15e-01 78.0% 98.3%
1y96D00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.72 50.0 4.28e-01 74.0% 69.9%
4f7uG00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.72 50.0 4.53e-01 74.0% 91.2%
3tm4A01 3.30.2130.30 Alpha Beta › 2-Layer Sandwich › VC0802-like › 0.71 59.0 3.97e-01 92.0% 100.0%
6julA02 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.71 48.0 3.95e-01 72.0% 56.2%
1unnC00 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.71 48.0 3.75e-01 72.0% 46.8%
1ca1A02 2.60.60.20 Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain 0.70 57.0 4.33e-01 90.0% 92.5%
2k57A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.70 52.0 5.13e-01 82.0% 100.0%
1i9gA01 3.10.330.20 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.69 47.0 4.40e-01 72.0% 92.2%
4a0tA03 2.60.320.30 Mainly Beta › Sandwich › mini-chromosome maintenance (MCM) complex, domain 2 › 0.68 48.0 4.02e-01 76.0% 70.0%
3vx8A01 3.40.140.100 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Ubiquitin-like modifier-activating enzyme ATG7 C-terminal domain 0.68 52.0 3.77e-01 84.0% 60.3%
5d2lE01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.68 56.0 4.47e-01 96.0% 73.1%
6rptC00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.68 58.0 4.47e-01 96.0% 77.7%
4a4yA01 2.60.200.50 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.68 47.0 3.80e-01 74.0% 95.9%
2yn5A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.67 55.0 4.80e-01 94.0% 72.2%
5xctB01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.67 55.0 4.36e-01 96.0% 79.5%
4pytA02 3.30.465.10 Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › 0.67 46.0 3.47e-01 74.0% 35.9%
4a53A01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.67 46.0 4.35e-01 72.0% 83.9%
3es1A02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.66 48.0 3.61e-01 84.0% 31.0%
3rj2X00 2.60.120.1150 Mainly Beta › Sandwich › Jelly Rolls › 0.66 56.0 4.16e-01 96.0% 66.2%
1qr4A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.66 55.0 4.69e-01 98.0% 79.3%
3bcwA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.66 46.0 3.68e-01 74.0% 35.6%
2i45D00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.65 46.0 3.73e-01 76.0% 38.4%
1a21A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.65 53.0 4.40e-01 96.0% 78.6%
2kxtA01 2.60.60.30 Mainly Beta › Sandwich › Lipoxygenase-1 › sav2460 like domains 0.65 52.0 3.80e-01 100.0% 86.9%
2fb7A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.64 44.0 3.84e-01 72.0% 88.7%
2hlcA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.63 52.0 4.26e-01 98.0% 76.0%
1o54A01 3.10.330.20 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.63 47.0 4.20e-01 82.0% 83.3%
3loiA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.63 48.0 3.38e-01 84.0% 56.2%
2f1eA00 2.60.40.1470 Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain 0.63 52.0 4.06e-01 96.0% 75.0%
6z9cA01 2.60.40.1470 Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain 0.62 50.0 3.93e-01 96.0% 61.5%
3mb5A01 3.10.330.20 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.62 46.0 4.34e-01 82.0% 95.2%
1a1rA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.62 52.0 4.44e-01 98.0% 84.7%
5owvD01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.62 52.0 3.49e-01 100.0% 32.0%
3omzA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 44.0 3.65e-01 82.0% 71.6%
2yvsA01 3.30.465.10 Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › 0.60 42.0 3.29e-01 74.0% 42.1%
4chkB00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.60 45.0 3.76e-01 82.0% 64.8%
5ja1B00 3.90.820.10 Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id 0.60 44.0 4.04e-01 80.0% 62.1%
1iyjB03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 44.0 3.28e-01 82.0% 38.7%
7ylrA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.60 40.0 3.23e-01 70.0% 70.5%
1u1sA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.60 54.0 4.88e-01 100.0% 84.8%
2fg9A01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.58 47.0 3.51e-01 100.0% 73.6%
3bh1A03 3.40.140.40 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Domain of unknown function (DUF1846), C-terminal subdomain 0.58 50.0 3.63e-01 98.0% 84.9%
2pstX00 3.90.820.10 Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id 0.58 42.0 4.03e-01 80.0% 67.2%
1zx8A01 2.40.100.20 Mainly Beta › Beta Barrel › Cyclophilin › 0.57 43.0 3.22e-01 80.0% 99.2%
1et9A01 3.10.20.120 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.57 44.0 3.67e-01 98.0% 77.3%
3cxgA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.57 41.0 3.28e-01 82.0% 73.8%
4iajA00 3.30.1490.390 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Protein of unknown function DUF4649 0.57 47.0 4.23e-01 98.0% 77.6%
1txkA01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.57 48.0 2.92e-01 100.0% 36.1%
2j4xA01 3.10.20.120 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.57 44.0 3.56e-01 98.0% 63.7%
2m6pA00 2.20.28.270 Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › RNA polymerase-binding protein A 0.57 46.0 4.74e-01 100.0% 97.8%
4r3dA03 2.60.120.1680 Mainly Beta › Sandwich › Jelly Rolls › 0.57 44.0 3.22e-01 84.0% 98.5%
2q30A01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.57 44.0 3.77e-01 96.0% 51.1%
1w1oA02 3.30.465.10 Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › 0.56 39.0 2.99e-01 74.0% 35.4%
1yudA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.56 42.0 3.07e-01 84.0% 45.8%
1uyvA01 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.56 46.0 3.00e-01 100.0% 41.6%
5hdwA00 2.60.40.1470 Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain 0.56 42.0 3.37e-01 96.0% 67.2%
6vtmB00 3.10.20.120 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.56 44.0 3.79e-01 98.0% 77.1%
2hldH01 2.60.15.10 Mainly Beta › Sandwich › ATP Synthase; domain 1 › F0F1 ATP synthase delta/epsilon subunit, N-terminal 0.55 45.0 3.97e-01 100.0% 92.9%
2iciA01 3.10.20.120 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.55 42.0 3.26e-01 98.0% 67.8%
2lw3A00 2.60.40.2880 Mainly Beta › Sandwich › Immunoglobulin-like › MmpS1-5, C-terminal soluble domain 0.54 41.0 3.58e-01 92.0% 84.4%
2mj6A00 3.30.450.250 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.53 37.0 3.26e-01 82.0% 62.2%
2bkfA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.53 39.0 3.52e-01 92.0% 97.6%
4kncA02 2.60.120.1380 Mainly Beta › Sandwich › Jelly Rolls › C-terminal carbohydrate-binding module 0.52 41.0 3.34e-01 98.0% 59.8%
3hr6A03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 39.0 3.16e-01 100.0% 89.5%
2a6pA00 3.40.50.1240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like 0.50 42.0 2.89e-01 96.0% 99.0%
2w1sA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.50 41.0 3.11e-01 96.0% 76.3%
ECOD (50)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4135575 304.7.1.25 a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › Se_S_carrier 0.88 75.0 6.31e-01 92.0% 100.0%
4932541 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.76 54.0 4.69e-01 74.0% 83.6%
5026934 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.76 54.0 4.63e-01 76.0% 78.8%
5077846 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.75 52.0 4.50e-01 72.0% 80.0%
4974641 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.74 55.0 4.85e-01 78.0% 90.0%
4575051 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.73 51.0 4.42e-01 76.0% 77.5%
4340758 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 49.0 4.38e-01 70.0% 88.6%
3625817 4.1.1.219 beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.72 51.0 4.35e-01 74.0% 72.5%
3941093 3792.1.1.0 beta sandwiches › 26S proteasome subunit Rpn2 C-terminal domain › 26S proteasome subunit Rpn2 C-terminal domain › 26S proteasome subunit Rpn2 C-terminal domain 0.72 64.0 5.14e-01 100.0% 69.5%
3475431 133.1.1.0 alpha bundles › DH domain-like › DBL homology domain (DH-domain) › DBL homology domain (DH-domain) 0.70 60.0 3.86e-01 98.0% 55.4%
1549365 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.70 53.0 4.48e-01 82.0% 81.9%
3785832 3792.1.1.2 beta sandwiches › 26S proteasome subunit Rpn2 C-terminal domain › 26S proteasome subunit Rpn2 C-terminal domain › 26S proteasome subunit Rpn2 C-terminal domain › APC1_3rd 0.70 62.0 5.11e-01 100.0% 72.2%
3725727 3792.1.1.0 beta sandwiches › 26S proteasome subunit Rpn2 C-terminal domain › 26S proteasome subunit Rpn2 C-terminal domain › 26S proteasome subunit Rpn2 C-terminal domain 0.69 62.0 5.17e-01 100.0% 76.5%
4946461 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.69 53.0 3.45e-01 84.0% 69.5%
4466599 301.6.1.0 a+b three layers › Bacillus chorismate mutase-like › Tubulin C-terminal domain-like › Tubulin C-terminal domain-like 0.69 49.0 3.40e-01 74.0% 56.7%
4983255 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.69 53.0 4.69e-01 86.0% 85.3%
3244451 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.68 55.0 4.52e-01 88.0% 72.2%
3603549 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 48.0 4.24e-01 76.0% 76.9%
3730011 4.1.1.17 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.68 52.0 3.79e-01 84.0% 68.6%
5040024 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.68 58.0 4.57e-01 98.0% 70.9%
3621133 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.68 49.0 3.05e-01 78.0% 96.9%
3603304 284.1.1.0 a+b two layers › FKBP-like › FKBP-like › FKBP-like 0.67 45.0 4.40e-01 70.0% 98.2%
3265723 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.67 54.0 5.46e-01 94.0% 94.0%
3224512 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.66 56.0 4.51e-01 98.0% 82.5%
3244334 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.66 55.0 4.27e-01 98.0% 71.7%
5022769 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.65 45.0 3.57e-01 76.0% 61.9%
3844612 376.1.1.3 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › ZZ 0.64 51.0 4.85e-01 94.0% 75.0%
3282775 284.1.1.9 a+b two layers › FKBP-like › FKBP-like › FKBP-like › TrmI-like_N 0.64 47.0 4.33e-01 80.0% 92.3%
3734369 4121.1.1.0 a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like 0.63 54.0 3.37e-01 98.0% 44.9%
4199672 2492.1.1.0 a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like 0.63 55.0 4.42e-01 98.0% 72.6%
3211717 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.63 40.0 4.55e-01 70.0% 91.4%
4332271 10.10.1.1 beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) › PLAT 0.62 51.0 3.95e-01 98.0% 92.7%
4383356 3615.1.1.49 alpha bundles › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › Dynamin_N 0.62 52.0 2.94e-01 96.0% 11.9%
3399617 245.1.1.1 a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 › RNase_PH_C 0.62 49.0 4.11e-01 90.0% 52.2%
3801221 245.1.1.0 a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 0.61 49.0 4.02e-01 90.0% 49.5%
3272904 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 49.0 4.24e-01 98.0% 67.1%
3240098 4184.1.1.0 beta barrels › MFPT repeat › MFPT repeat › MFPT repeat 0.59 42.0 3.45e-01 78.0% 85.9%
1161323 1.1.5.14 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Peptidase_S29 0.58 47.0 3.36e-01 98.0% 38.7%
3214943 390.1.1.1 few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 0.58 42.0 3.73e-01 82.0% 86.3%
4651135 245.1.1.0 a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 0.57 46.0 3.95e-01 92.0% 61.2%
6198 221.1.1.17 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Stap_Strp_tox_C 0.57 44.0 3.68e-01 98.0% 78.0%
3926581 864.1.1.0 a+b two layers › DLC › DLC › DLC 0.57 40.0 3.19e-01 76.0% 53.3%
5054792 245.1.1.1 a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 › RNase_PH_C 0.56 44.0 3.80e-01 90.0% 60.0%
3273403 11.1.1.843 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7034 0.55 45.0 3.13e-01 100.0% 45.0%
3626139 10.32.1.221 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF25900 0.54 45.0 3.49e-01 98.0% 55.8%
3528111 10.21.1.0 beta sandwiches › jelly-roll › Jelly-roll domain in ADAMTS13 › Jelly-roll domain in ADAMTS13 0.54 45.0 3.44e-01 98.0% 62.4%
3772640 10.21.1.1 beta sandwiches › jelly-roll › Jelly-roll domain in ADAMTS13 › Jelly-roll domain in ADAMTS13 › ADAMTS_spacer1 0.52 45.0 3.43e-01 100.0% 63.2%
4972486 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.51 39.0 3.78e-01 82.0% 100.0%
4000085 223.1.1.11 a+b three layers › Profilin-like › sensor domains › sensor domains › HNOBA 0.51 36.0 2.87e-01 78.0% 45.5%
4952888 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.50 32.0 3.19e-01 94.0% 60.0%