OP272492.1UZT50349.1X__00110

Bact-Vir

OP272492.1__UZT50349.1__X__00110

Identity

Accession:: OP272492 ↗
Kingdom:: phage

Quality

85.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Autographivirales› Autotranscriptaviridae› Kayfunavirus› Enterobacter_phage_03_vB_Eclo_IJM

TaxID: 2983353

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-47

PDB

Domain cluster: representative

CATH (35)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3c18A03	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.64	43.0	4.08e-01	74.5%	57.9%
5dymA00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.63	46.0	3.68e-01	83.0%	38.5%
3l7wA00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.62	43.0	3.41e-01	83.0%	33.3%
2dqlA00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.62	45.0	3.42e-01	83.0%	32.2%
2kqrA01	3.30.1910.20	Alpha Beta › 2-Layer Sandwich › so0334 like fold › asparaginyl-tRNA synthetase, N-terminal domain	0.61	36.0	3.10e-01	100.0%	36.5%
5b55A01	3.40.50.1100	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold ›	0.60	43.0	2.89e-01	76.6%	30.0%
1lkxC03	1.20.120.720	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Myosin VI head, motor domain, U50 subdomain	0.60	41.0	3.25e-01	76.6%	31.8%
5cm2Z00	3.40.50.150	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39	0.59	43.0	2.92e-01	80.9%	21.2%
4jneA03	3.90.640.10	Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4	0.59	36.0	2.96e-01	91.5%	34.1%
4gqaB02	3.30.360.10	Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2	0.58	45.0	2.94e-01	89.4%	21.6%
3l9fA01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.58	41.0	3.41e-01	83.0%	40.4%
1xhsA00	3.10.490.10	Alpha Beta › Roll › Hypothetical upf0131 protein ytfp › Gamma-glutamyl cyclotransferase-like	0.58	39.0	3.13e-01	91.5%	31.0%
2qbyB03	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.58	40.0	3.38e-01	85.1%	38.5%
6kf9G01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.57	40.0	3.47e-01	83.0%	43.9%
1neiA00	3.30.160.220	Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › YoaG	0.57	36.0	3.42e-01	72.3%	48.3%
1k8kA04	3.90.640.10	Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4	0.57	42.0	3.48e-01	93.6%	42.4%
3r0aA00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.57	39.0	2.97e-01	74.5%	57.5%
4jdmA02	6.10.250.2680	Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces ›	0.55	35.0	3.31e-01	76.6%	47.6%
4fb5A02	3.30.360.10	Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2	0.54	41.0	2.69e-01	87.2%	21.5%
3zqmA00	6.10.140.2160	Special › Helix non-globular › Helix Hairpins ›	0.54	35.0	3.26e-01	70.2%	54.2%
3mk7C01	6.10.280.130	Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.54	38.0	3.00e-01	74.5%	39.4%
2k6vA00	3.40.30.10	Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin	0.54	42.0	3.07e-01	100.0%	31.4%
1dq3A03	3.10.28.10	Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases	0.54	39.0	3.26e-01	83.0%	43.7%
4lhfA00	6.10.200.10	Special › Helix non-globular › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › Regulatory phage protein Cox	0.54	37.0	3.09e-01	78.7%	43.0%
4kt5C00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.54	35.0	3.00e-01	74.5%	36.4%
1t6sB02	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.54	39.0	3.47e-01	91.5%	50.6%
1bm9A00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.53	39.0	3.01e-01	83.0%	32.5%
3a32A02	3.40.50.800	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain	0.53	37.0	2.72e-01	74.5%	24.8%
2eshA00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.53	43.0	3.35e-01	97.9%	38.6%
6zwwC01	3.40.50.300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases	0.53	41.0	2.88e-01	89.4%	68.2%
5h20A00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.52	44.0	3.49e-01	97.9%	43.7%
4cbgD02	3.40.50.300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases	0.52	38.0	2.69e-01	80.9%	56.5%
3delB01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.52	38.0	2.69e-01	78.7%	58.3%
6ko5A02	1.20.1070.10	Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins	0.52	39.0	2.51e-01	91.5%	60.6%
3k59A02	3.30.70.2250	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › B family DNA polymerase, N domain, alpha/beta motif	0.51	35.0	3.18e-01	83.0%	50.7%

ECOD (78)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3484509	108.1.1.0 ↗	alpha arrays › EF-hand › EF-hand-related › EF-hand	0.74	44.0	3.14e-01	100.0%	22.4%
2987353	101.1.21.1 ↗	alpha arrays › HTH › HTH › HTH in T7 RNA polymerase › RPOL_N	0.72	61.0	3.88e-01	100.0%	18.6%
4567496	331.2.1.1 ↗	a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV	0.71	38.0	3.25e-01	95.7%	33.3%
4561147	101.1.2.31 ↗	alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha	0.71	47.0	3.47e-01	70.2%	70.3%
4985036	101.1.2.31 ↗	alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha	0.70	47.0	3.20e-01	70.2%	52.4%
4930596	101.1.2.31 ↗	alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha	0.68	46.0	3.13e-01	70.2%	54.7%
3700237	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.64	43.0	3.12e-01	70.2%	63.8%
3946755	605.1.1.26 ↗	alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › DUF2058	0.63	43.0	3.25e-01	72.3%	44.3%
4974447	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.63	43.0	3.30e-01	83.0%	29.2%
5033035	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.63	43.0	3.25e-01	76.6%	28.8%
164542	101.1.2.48 ↗	alpha arrays › HTH › HTH › winged helix domain › PadR	0.62	45.0	3.42e-01	83.0%	32.2%
5025840	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.62	45.0	3.63e-01	89.4%	38.0%
5050784	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.62	47.0	3.88e-01	89.4%	44.4%
5035685	101.1.2.48 ↗	alpha arrays › HTH › HTH › winged helix domain › PadR	0.62	43.0	3.26e-01	83.0%	29.0%
5025618	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.61	44.0	3.40e-01	83.0%	33.6%
5058727	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.61	46.0	3.29e-01	83.0%	27.6%
4153200	4967.1.1.0 ↗	alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases	0.61	47.0	3.40e-01	89.4%	56.0%
4959599	101.1.2.48 ↗	alpha arrays › HTH › HTH › winged helix domain › PadR	0.61	44.0	3.37e-01	83.0%	32.5%
3865493	5001.1.1.5 ↗	alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_3	0.61	50.0	3.18e-01	100.0%	29.6%
3236563	3567.1.1.0 ↗	a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer	0.61	49.0	3.72e-01	95.7%	36.0%
4981961	101.1.2.819 ↗	alpha arrays › HTH › HTH › winged helix domain › PF27231	0.60	42.0	2.99e-01	83.0%	22.5%
3921728	192.2.1.0 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin	0.60	48.0	3.73e-01	95.7%	38.3%
4943395	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.60	40.0	2.78e-01	74.5%	19.4%
3619358	5001.1.1.111 ↗	alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1, 7TM_GPCR_Srw	0.60	48.0	2.97e-01	100.0%	88.7%
3788727	101.1.2.24 ↗	alpha arrays › HTH › HTH › winged helix domain › MAGE	0.60	46.0	3.39e-01	87.2%	52.1%
5027566	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.60	43.0	3.62e-01	83.0%	43.5%
4438513	101.1.2.31 ↗	alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha	0.60	43.0	3.35e-01	80.9%	33.6%
3860270	5001.1.1.5 ↗	alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_3	0.60	47.0	3.06e-01	100.0%	29.6%
4873578	223.3.1.3 ↗	a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase	0.60	35.0	3.01e-01	100.0%	35.6%
4961841	101.1.2.101 ↗	alpha arrays › HTH › HTH › winged helix domain › Cdc6_C	0.59	40.0	3.01e-01	76.6%	25.4%
4314672	101.1.2.101 ↗	alpha arrays › HTH › HTH › winged helix domain › Cdc6_C	0.59	39.0	3.15e-01	83.0%	30.5%
3699463	3755.3.1.0 ↗	alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin	0.59	45.0	3.03e-01	95.7%	19.5%
4976773	101.1.2.275 ↗	alpha arrays › HTH › HTH › winged helix domain › DUF1495	0.59	42.0	3.31e-01	83.0%	33.6%
3280086	101.1.2.48 ↗	alpha arrays › HTH › HTH › winged helix domain › PadR	0.59	43.0	2.91e-01	83.0%	20.6%
4998735	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.58	44.0	3.40e-01	93.6%	32.6%
5011468	101.1.2.31 ↗	alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha	0.58	40.0	3.03e-01	83.0%	28.0%
4478999	101.1.2.31 ↗	alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha	0.58	40.0	2.79e-01	74.5%	20.2%
5011653	101.1.2.30 ↗	alpha arrays › HTH › HTH › winged helix domain › TrmB	0.58	41.0	3.23e-01	80.9%	33.6%
3468397	101.1.2.386 ↗	alpha arrays › HTH › HTH › winged helix domain › WH_DRP	0.58	44.0	3.44e-01	97.9%	35.0%
5054122	101.1.2.31 ↗	alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha	0.58	39.0	2.79e-01	80.9%	21.3%
4344487	375.1.1.179 ↗	few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha	0.57	39.0	2.73e-01	74.5%	20.6%
2391543	101.1.2.48 ↗	alpha arrays › HTH › HTH › winged helix domain › PadR	0.57	42.0	2.86e-01	89.4%	19.8%
5031648	101.1.2.31 ↗	alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha	0.57	39.0	2.74e-01	74.5%	20.6%
5016748	101.1.2.30 ↗	alpha arrays › HTH › HTH › winged helix domain › TrmB	0.57	39.0	3.06e-01	83.0%	30.0%
4527101	101.1.2.31 ↗	alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha	0.57	40.0	2.88e-01	80.9%	23.1%
4981949	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.57	40.0	3.48e-01	80.9%	46.3%
4507638	101.1.2.31 ↗	alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha	0.56	38.0	2.70e-01	74.5%	20.6%
4476647	101.1.2.15 ↗	alpha arrays › HTH › HTH › winged helix domain › MarR	0.56	45.0	3.38e-01	100.0%	33.6%
3369564	130.1.1.39 ↗	alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › DUF7086	0.56	38.0	2.79e-01	72.3%	24.3%
5052491	101.1.2.31 ↗	alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha	0.56	39.0	2.65e-01	80.9%	18.4%
5062639	101.1.2.15 ↗	alpha arrays › HTH › HTH › winged helix domain › MarR	0.56	42.0	3.47e-01	91.5%	43.2%
5070883	101.1.2.31 ↗	alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha	0.56	39.0	3.28e-01	80.9%	41.1%
4964954	101.1.2.136 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_20	0.55	43.0	3.39e-01	100.0%	37.5%
4993652	375.1.1.179 ↗	few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha	0.55	45.0	3.19e-01	100.0%	61.1%
4221024	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.55	38.0	2.53e-01	74.5%	16.6%
3667109	101.1.2.111 ↗	alpha arrays › HTH › HTH › winged helix domain › RQC	0.55	39.0	2.98e-01	83.0%	29.6%
4456198	375.1.1.0 ↗	few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related	0.55	45.0	3.08e-01	95.7%	65.4%
4004118	375.1.1.179 ↗	few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha	0.55	45.0	3.08e-01	95.7%	73.0%
5042462	101.1.2.31 ↗	alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha	0.55	40.0	2.81e-01	80.9%	23.0%
5070276	101.1.2.142 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_Crp_2	0.55	42.0	3.15e-01	93.6%	30.3%
4944735	101.1.2.542 ↗	alpha arrays › HTH › HTH › winged helix domain › ATPase_2	0.55	43.0	3.31e-01	97.9%	35.2%
3239359	5001.1.1.1 ↗	alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1	0.54	43.0	2.64e-01	89.4%	33.2%
4998580	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.54	44.0	3.61e-01	97.9%	47.8%
3976170	101.1.9.26 ↗	alpha arrays › HTH › HTH › Putative DNA-binding domain › YfeC-like	0.54	38.0	3.46e-01	78.7%	57.1%
4061942	101.1.2.101 ↗	alpha arrays › HTH › HTH › winged helix domain › Cdc6_C	0.54	41.0	3.20e-01	93.6%	48.0%
3173046	304.162.1.2 ↗	a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › FLAD1_M	0.53	37.0	3.10e-01	76.6%	38.2%
5070663	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.53	45.0	3.33e-01	100.0%	46.4%
5062171	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.53	42.0	3.11e-01	97.9%	31.3%
3933688	5001.1.1.1 ↗	alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1	0.52	41.0	2.59e-01	100.0%	68.1%
3330019	101.1.2.88 ↗	alpha arrays › HTH › HTH › winged helix domain › Dimerisation	0.52	40.0	3.19e-01	97.9%	38.3%
3883169	5001.1.1.3 ↗	alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_2	0.52	39.0	2.49e-01	80.9%	92.2%
4297859	314.1.1.2 ↗	a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2b	0.52	44.0	2.70e-01	100.0%	14.3%
3349141	375.1.1.182 ↗	few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF7086	0.52	37.0	2.71e-01	80.9%	26.4%
5041543	101.1.2.135 ↗	alpha arrays › HTH › HTH › winged helix domain › MarR_2	0.52	44.0	3.23e-01	100.0%	79.3%
4980445	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.52	40.0	3.02e-01	97.9%	31.0%
4940950	101.1.2.143 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_34	0.51	40.0	3.47e-01	97.9%	52.5%
3730463	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.51	40.0	3.13e-01	100.0%	47.7%
4965874	101.1.2.30 ↗	alpha arrays › HTH › HTH › winged helix domain › TrmB	0.51	40.0	3.03e-01	95.7%	57.5%

D2 medium residues 67-110

PDB

Domain cluster: representative

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4q6rB01	6.10.140.2150	Special › Helix non-globular › Helix Hairpins ›	0.55	34.0	3.24e-01	77.3%	50.9%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3389615	386.1.1.0 ↗	few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers	0.53	37.0	3.89e-01	93.2%	86.8%