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OP272493.1__UZT50380.1__X__00018
Bact-VirOP272493.1__UZT50380.1__X__00018
Identity
- Accession:
- OP272493 ↗
- Kingdom:
- phage
Quality
83.7
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Autographivirales›
Autotranscriptaviridae›
Kayfunavirus›
Enterobacter_phage_04_vB_Eclo_IJM
TaxID: 2983354
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 71-164
Domain cluster:
rep: NC_055736.1__YP_010093527.1__KNT80_gp84__00084__D8-79
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00940.25 best | RNA_pol | 87.9 | 9.40e-25 | 87.2% | 16.7% |
D2
high
residues 175-274
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5umbA02 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.64 | 25.0 | 2.93e-01 | 71.0% | 48.0% |
| 4oycB00 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.63 | 31.0 | 3.26e-01 | 77.0% | 51.7% |
| 4bbyA05 | 3.30.300.330 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › | 0.56 | 29.0 | 2.83e-01 | 88.0% | 45.4% |
| 1k0rA01 | 3.30.1480.10 | Alpha Beta › 2-Layer Sandwich › N Utilization Substance Protein A; Chain:P; domain 4 › NusA, N-terminal domain | 0.54 | 28.0 | 2.90e-01 | 86.0% | 47.5% |
| 1vq0A02 | 3.90.1280.10 | Alpha Beta › Alpha-Beta Complex › CBS domain Like › HSP33 redox switch-like | 0.52 | 23.0 | 2.84e-01 | 96.0% | 64.9% |
| 3d2fA04 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.51 | 28.0 | 3.04e-01 | 74.0% | 60.7% |
| 1fxkB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.51 | 34.0 | 3.38e-01 | 70.0% | 77.1% |
| 2c7yA00 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.51 | 40.0 | 2.80e-01 | 95.0% | 23.0% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2932 | 4964.1.1.2 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › RNA_pol | 0.83 | 71.0 | 5.25e-01 | 89.0% | 39.2% |
| 3486876 | 5048.1.1.7 ↗ | alpha complex topology › Aquaporin-like › Aquaporin-like › Aquaporin-like › DUF389 | 0.62 | 48.0 | 3.65e-01 | 82.0% | 80.8% |
| 3724441 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.62 | 28.0 | 3.38e-01 | 89.0% | 61.5% |
| 3882804 | 263.1.1.4 ↗ | a+b three layers › SRF-like › SRF-like › SRF-like › PRAS_NT | 0.61 | 22.0 | 2.80e-01 | 71.0% | 51.6% |
| 3241070 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.58 | 46.0 | 3.49e-01 | 86.0% | 64.5% |
| 4453177 | 4207.1.2.1 ↗ | alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › MED7 hinge region › Med7 | 0.58 | 37.0 | 3.45e-01 | 88.0% | 52.0% |
| 3649913 | 5050.1.1.58 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › NFD4_C | 0.56 | 42.0 | 3.61e-01 | 80.0% | 90.6% |
| 3412378 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.56 | 21.0 | 3.08e-01 | 70.0% | 75.6% |
| 3421312 | 263.1.1.1 ↗ | a+b three layers › SRF-like › SRF-like › SRF-like › SRF-TF | 0.55 | 28.0 | 3.29e-01 | 89.0% | 68.6% |
| 3641171 | 3016.1.1.12 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Alliinase_C | 0.53 | 31.0 | 2.90e-01 | 70.0% | 47.5% |
| 3360650 | 192.29.1.27 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › DUF1218 | 0.53 | 37.0 | 3.09e-01 | 73.0% | 87.2% |
| 4899007 | 3121.1.1.0 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain | 0.52 | 27.0 | 3.12e-01 | 93.0% | 66.7% |
| 4023956 | 3871.1.1.1 ↗ | alpha duplicates or obligate multimers › PHIST › PHIST › PHIST › PRESAN | 0.52 | 40.0 | 3.75e-01 | 83.0% | 68.5% |
| 4026685 | 150.1.1.51 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › PqiA | 0.50 | 40.0 | 3.10e-01 | 88.0% | 92.0% |
| 3512028 | 5001.1.1.5 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_3 | 0.50 | 40.0 | 2.92e-01 | 85.0% | 43.3% |
| 3423395 | 3745.1.1.1 ↗ | alpha bundles › Sodium/Calcium exchanger › Sodium/Calcium exchanger › Sodium/Calcium exchanger › Na_Ca_ex | 0.50 | 40.0 | 2.70e-01 | 86.0% | 83.0% |
| 4987009 | 3837.1.1.1 ↗ | alpha bundles › Uncharacterized conserved protein Dip1984 › Uncharacterized conserved protein Dip1984 › Uncharacterized conserved protein Dip1984 › DUF6847 | 0.50 | 36.0 | 3.21e-01 | 75.0% | 58.0% |