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OP291336.1__UYD72377.1__AIIMSE5_030__00030

Bact-Vir

OP291336.1__UYD72377.1__AIIMSE5_030__00030

Identity

Accession:
OP291336 ↗
Kingdom:
phage

Quality

91.1 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 106-210
PDB
Domain cluster: representative
CATH (44)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1x9mA03 3.30.70.370 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.84 73.0 5.95e-01 98.1% 53.4%
2iboA00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.73 46.0 4.93e-01 86.7% 74.2%
2diuA01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.73 44.0 5.13e-01 83.8% 86.3%
3g87A02 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.70 40.0 4.78e-01 81.0% 86.6%
7ahbB01 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.70 37.0 4.72e-01 79.0% 91.5%
3tzyA02 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.70 38.0 4.56e-01 81.9% 80.0%
1bqnA02 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.70 46.0 4.87e-01 86.7% 75.5%
2rqkA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.69 45.0 4.47e-01 92.4% 63.3%
3jcmH04 3.30.70.870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 0.69 43.0 4.84e-01 87.6% 84.4%
6lxgA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.68 43.0 5.03e-01 85.7% 91.8%
2mzwA01 3.30.70.870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 0.68 40.0 4.59e-01 81.9% 80.3%
2g47A03 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.67 61.0 4.71e-01 100.0% 70.0%
1ohvA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.67 43.0 3.67e-01 90.5% 41.0%
1fx2A00 3.30.70.1230 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain 0.66 59.0 4.53e-01 99.0% 64.3%
1dikA01 3.30.1490.20 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain 0.65 36.0 3.21e-01 88.6% 37.3%
2pb2B01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.65 43.0 3.87e-01 91.4% 49.3%
1yirA00 3.20.140.10 Alpha Beta › Alpha-Beta Barrel › nicotinate phosphoribosyltransferase › nicotinate phosphoribosyltransferase 0.63 53.0 3.60e-01 92.4% 83.3%
4wp3C00 3.30.70.1230 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain 0.63 57.0 4.67e-01 99.0% 57.2%
1c0gA03 3.90.640.10 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 0.62 33.0 3.49e-01 86.7% 56.5%
4py5A01 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.62 40.0 4.72e-01 72.4% 95.8%
1ybtB00 3.30.70.1230 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain 0.61 56.0 4.67e-01 99.0% 62.2%
3ffhA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.60 45.0 4.19e-01 99.0% 62.1%
2fbhA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 47.0 4.25e-01 83.8% 87.6%
1go4A00 3.30.900.10 Alpha Beta › 2-Layer Sandwich › Cell Cycle, Spindle Assembly Checkpoint Protein; Chain A › HORMA domain 0.58 45.0 3.64e-01 81.0% 78.6%
3bpvA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 45.0 4.18e-01 84.8% 93.4%
4tpsD00 3.30.300.180 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › DnaA, N-terminal domain 0.56 41.0 4.52e-01 89.5% 97.6%
1s12A00 3.30.70.1490 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp 0.56 39.0 4.13e-01 94.3% 83.0%
4g9yA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 43.0 3.98e-01 82.9% 89.0%
2gxgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 42.0 3.87e-01 84.8% 89.3%
3fkdA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.54 38.0 3.79e-01 99.0% 68.8%
3cjnA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 42.0 3.81e-01 85.7% 86.3%
8agaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 42.0 3.97e-01 83.8% 92.9%
1r8gA00 3.30.590.20 Alpha Beta › 2-Layer Sandwich › Creatine Kinase; Chain A, domain 2 › 0.53 44.0 3.09e-01 92.4% 56.8%
4em2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 41.0 3.69e-01 84.8% 85.3%
2lsoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 33.0 3.63e-01 89.5% 79.5%
4gyiA02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.52 33.0 3.47e-01 87.6% 68.4%
3pgvA02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.52 43.0 4.44e-01 89.5% 96.0%
1f02T00 4.10.820.10 Few Secondary Structures › Irregular › Translocated Intimin Receptor; Chain T › Translocated intimin receptor, central domain 0.52 31.0 3.69e-01 78.1% 92.4%
3ltoA02 3.30.70.890 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain 0.51 41.0 3.82e-01 86.7% 97.0%
2fbiA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 40.0 3.71e-01 84.8% 91.2%
4ht4A00 3.30.930.30 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › 0.51 43.0 3.52e-01 93.3% 53.1%
6vudA01 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.50 42.0 4.24e-01 94.3% 96.3%
4zevA02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.50 40.0 3.98e-01 85.7% 93.5%
1e6vB02 1.20.840.10 Mainly Alpha › Up-down Bundle › Methyl-coenzyme M Reductase; Chain B, domain 2 › Methyl-coenzyme M reductase, alpha/beta subunit, C-terminal 0.50 40.0 2.96e-01 87.6% 42.9%
ECOD (51)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3613455 304.48.1.0 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like 0.96 88.0 7.81e-01 99.0% 71.2%
3598488 304.48.1.0 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like 0.96 87.0 7.39e-01 99.0% 62.7%
3591785 304.48.1.0 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like 0.95 88.0 7.56e-01 100.0% 66.7%
3608339 304.48.1.6 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_A 0.95 88.0 7.89e-01 100.0% 74.1%
3706910 304.48.1.0 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like 0.95 88.0 6.80e-01 100.0% 50.0%
4379259 304.48.1.6 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_A 0.88 70.0 6.94e-01 98.1% 79.8%
4995741 304.48.1.6 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_A 0.87 72.0 6.39e-01 100.0% 62.8%
3742418 304.11.1.0 a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase 0.79 49.0 5.38e-01 86.7% 76.5%
4339024 3012.1.1.0 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain 0.74 49.0 5.66e-01 97.1% 96.0%
4336258 304.11.1.0 a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase 0.74 42.0 4.92e-01 84.8% 82.9%
4220908 304.11.1.0 a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase 0.73 42.0 4.97e-01 84.8% 84.3%
3997731 304.24.1.0 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like 0.72 45.0 5.08e-01 87.6% 82.5%
3640563 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.70 47.0 5.36e-01 93.3% 96.0%
3714022 304.24.1.3 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_III 0.70 41.0 5.06e-01 88.6% 100.0%
3395101 309.1.1.8 a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › Peptidase_M16_M 0.69 63.0 4.79e-01 100.0% 66.7%
3511287 304.48.1.4 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Guanylate_cyc 0.68 62.0 4.71e-01 97.1% 51.7%
4343334 3715.1.1.1 a+b two layers › Ribosomal protein L22e › Ribosomal protein L22e › Ribosomal protein L22e › Ribosomal_L22e 0.67 48.0 4.97e-01 96.2% 79.0%
3601388 304.24.1.0 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like 0.67 40.0 4.63e-01 87.6% 84.0%
4012239 633.6.1.0 alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like 0.64 51.0 3.71e-01 85.7% 75.1%
3810441 304.7.1.2 a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › Inhibitor_I9 0.64 40.0 4.50e-01 87.6% 85.3%
3795160 304.48.1.4 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Guanylate_cyc 0.64 58.0 4.55e-01 100.0% 58.2%
4192195 327.10.1.3 a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related › DnaA_N 0.64 48.0 5.27e-01 88.6% 100.0%
4578875 327.10.1.3 a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related › DnaA_N 0.62 47.0 5.08e-01 93.3% 98.8%
5077445 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 29.0 2.56e-01 73.3% 30.1%
5035757 1036.1.1.1 a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 0.62 46.0 4.65e-01 93.3% 78.1%
3452455 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.61 39.0 4.57e-01 87.6% 97.1%
4939027 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.61 49.0 4.70e-01 93.3% 75.8%
4097041 327.10.1.3 a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related › DnaA_N 0.60 43.0 4.80e-01 83.8% 98.8%
4231848 327.10.1.3 a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related › DnaA_N 0.60 46.0 4.94e-01 93.3% 100.0%
4981647 4070.1.1.4 alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50B 0.59 52.0 4.38e-01 100.0% 55.9%
4085474 327.10.1.3 a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related › DnaA_N 0.59 41.0 4.58e-01 81.0% 100.0%
4957408 1036.1.1.1 a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 0.59 44.0 4.48e-01 96.2% 81.0%
3904873 5001.1.1.3 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_2 0.58 40.0 2.90e-01 80.0% 26.4%
3540024 5001.1.1.3 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_2 0.58 40.0 2.94e-01 76.2% 26.4%
3640935 3543.1.1.4 alpha complex topology › Acid-activated urea channel › Acid-activated urea channel › Acid-activated urea channel › DUF716 0.58 43.0 3.35e-01 79.0% 37.0%
3641526 2004.5.1.3 a/b three-layered sandwiches › P-loop domains-like › Differentially expressed in normal cells and neoplasia (DENN) domain › Differentially expressed in normal cells and neoplasia (DENN) domain › DENN 0.58 37.0 2.88e-01 94.3% 28.2%
3726808 4163.1.1.1 alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like › Sld5 0.57 34.0 2.86e-01 87.6% 35.0%
4669080 327.10.1.3 a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related › DnaA_N 0.56 42.0 4.34e-01 88.6% 84.0%
5579 306.8.1.1 a+b two layers › Glucose permease domain IIB-like › TM1457-like › TM1457-like › Peptidase_Prp 0.56 39.0 4.13e-01 94.3% 83.0%
5049161 177.1.1.0 alpha bundles › Phospholipase C/P1 nuclease › Phospholipase C/P1 nuclease › Phospholipase C/P1 nuclease 0.54 41.0 3.26e-01 79.0% 64.3%
3330955 2004.5.1.3 a/b three-layered sandwiches › P-loop domains-like › Differentially expressed in normal cells and neoplasia (DENN) domain › Differentially expressed in normal cells and neoplasia (DENN) domain › DENN 0.54 36.0 2.80e-01 94.3% 29.3%
3291426 327.10.1.0 a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related 0.54 40.0 4.31e-01 93.3% 98.8%
3164638 2006.1.1.37 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › S6PP+Hydrolase_3 0.53 45.0 3.36e-01 92.4% 52.3%
3939830 5001.1.1.66 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Srg 0.53 40.0 3.02e-01 81.0% 38.1%
4044429 1197.1.1.1 alpha bundles › Integral membrane glycerol 3-phosphate acyltransferase PlsY › Integral membrane glycerol 3-phosphate acyltransferase PlsY › Integral membrane glycerol 3-phosphate acyltransferase PlsY › G3P_acyltransf 0.53 44.0 3.48e-01 92.4% 65.7%
3745161 4323.1.1.2 alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › V-ATPase_C 0.52 41.0 4.23e-01 85.7% 91.0%
3928473 5001.1.1.66 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Srg 0.52 41.0 2.98e-01 85.7% 65.8%
3718200 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.52 31.0 2.96e-01 87.6% 51.2%
4046225 5001.1.1.6 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Bac_rhodopsin 0.51 44.0 3.40e-01 99.0% 70.9%
1695454 3517.1.1.1 a+b complex topology › Polymerase acidic protein › Polymerase acidic protein › Polymerase acidic protein › Flu_PA 0.50 38.0 2.53e-01 81.9% 49.4%
4992051 5069.1.3.1 alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits › Sdh_cyt 0.50 35.0 3.24e-01 79.0% 53.8%
D2 medium residues 44-101
PDB
Domain cluster: representative
CATH (50)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3dtdD00 2.60.40.1880 Mainly Beta › Sandwich › Immunoglobulin-like › Invasion associated locus B (IalB) protein 0.63 46.0 3.52e-01 89.7% 32.4%
3ro6C01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.61 50.0 4.22e-01 94.8% 83.0%
3ci0I00 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.61 44.0 4.00e-01 82.8% 55.4%
2qkdA01 2.20.25.420 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain 0.61 43.0 4.67e-01 75.9% 89.6%
3n8bA00 3.10.450.700 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 47.0 4.36e-01 93.1% 68.0%
3n91A02 2.40.128.420 Mainly Beta › Beta Barrel › Lipocalin › 0.58 44.0 3.39e-01 82.8% 58.1%
3wa7A00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.58 50.0 2.98e-01 100.0% 22.3%
4ew7A00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.58 48.0 3.86e-01 91.4% 93.8%
4nyqA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.58 38.0 2.87e-01 72.4% 25.5%
2x8fA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.58 45.0 2.87e-01 87.9% 85.8%
3lygA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 40.0 3.23e-01 86.2% 35.8%
4emoC00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 44.0 3.57e-01 96.6% 42.2%
2vf9A00 3.30.380.10 Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein 0.57 42.0 3.35e-01 81.0% 66.4%
3a58A01 2.30.29.90 Mainly Beta › Roll › PH-domain like › 0.57 49.0 3.56e-01 100.0% 44.8%
2mc2A00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.57 39.0 2.78e-01 87.9% 20.9%
4jn7A01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.57 48.0 3.89e-01 100.0% 76.5%
4dloB01 4.10.1240.10 Few Secondary Structures › Irregular › Hormone receptor fold › GPCR, family 2, extracellular hormone receptor domain 0.57 36.0 3.50e-01 84.5% 56.1%
3cawA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.56 46.0 4.06e-01 94.8% 68.1%
1gydB00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.56 44.0 2.89e-01 91.4% 67.9%
2kigA00 2.30.29.110 Mainly Beta › Roll › PH-domain like › 0.56 47.0 3.54e-01 100.0% 39.1%
3mr0A01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.55 37.0 3.09e-01 75.9% 37.3%
2gu3A02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 41.0 4.02e-01 100.0% 74.6%
3mazA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.55 37.0 3.28e-01 89.7% 42.4%
4xrtA02 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.55 39.0 2.90e-01 87.9% 27.5%
3rwxA01 2.40.128.340 Mainly Beta › Beta Barrel › Lipocalin › 0.55 45.0 3.56e-01 94.8% 44.2%
2k75A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 48.0 4.01e-01 100.0% 67.0%
3ebtA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 38.0 3.09e-01 89.7% 34.4%
1ae2A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.54 46.0 4.15e-01 100.0% 91.9%
2e12A00 2.30.30.720 Mainly Beta › Roll › SH3 type barrels. › Protein of unknown function (DUF3247) 0.54 39.0 3.47e-01 98.3% 50.5%
3doaA01 2.30.310.10 Mainly Beta › Roll › ibrinogen binding protein from staphylococcus aureus fold › ibrinogen binding protein from staphylococcus aureus domain 0.54 44.0 3.42e-01 100.0% 40.5%
3k7uC00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.54 44.0 3.80e-01 96.6% 87.8%
4fczA00 3.10.450.710 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Tgt2/MlaC 0.53 46.0 3.29e-01 100.0% 54.6%
1xi7A00 4.10.40.20 Few Secondary Structures › Irregular › Omega-AgatoxinV › 0.53 38.0 4.07e-01 79.3% 95.7%
3volA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.53 38.0 2.98e-01 79.3% 81.2%
2y1sA00 2.30.60.10 Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N 0.53 40.0 3.43e-01 89.7% 54.6%
2ecfA01 2.140.10.30 Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain 0.53 37.0 2.29e-01 100.0% 10.2%
7fisA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.52 40.0 2.68e-01 98.3% 18.0%
1a1aB00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.52 43.0 3.70e-01 96.6% 69.6%
6yfiB01 3.30.380.10 Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein 0.52 42.0 3.34e-01 96.6% 96.3%
4n4bA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.52 43.0 2.78e-01 100.0% 23.5%
5xe7A02 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 40.0 3.29e-01 100.0% 44.1%
4pj2A00 2.40.128.460 Mainly Beta › Beta Barrel › Lipocalin › Periplasmic lysozyme inhibitor of I-type lysozyme 0.51 42.0 3.50e-01 100.0% 66.1%
1pcfA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.51 33.0 3.21e-01 87.9% 56.1%
2h36X00 3.30.160.300 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.51 44.0 3.66e-01 100.0% 69.4%
4kc3A00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.51 41.0 3.28e-01 96.6% 67.9%
4gs3A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 42.0 3.77e-01 100.0% 66.7%
3ddmA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.50 42.0 3.41e-01 100.0% 81.6%
2r55A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.50 40.0 2.91e-01 98.3% 69.7%
3kztA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.50 40.0 3.25e-01 96.6% 43.2%
2g8sB00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.50 40.0 2.60e-01 98.3% 17.0%
ECOD (69)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3630007 214.1.1.0 a+b two layers › SH2 › SH2 › SH2 0.75 50.0 4.00e-01 84.5% 36.4%
4998245 316.1.1.0 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase 0.74 56.0 4.06e-01 81.0% 56.8%
3262017 2008.6.1.1 a/b three-layered sandwiches › Restriction endonuclease-like › Acetyl-CoA carboxylase AC4 and AC5 domains › Acetyl-CoA carboxylase AC4 and AC5 domains › ACC_central 0.69 55.0 3.77e-01 89.7% 46.2%
3170444 2008.6.1.1 a/b three-layered sandwiches › Restriction endonuclease-like › Acetyl-CoA carboxylase AC4 and AC5 domains › Acetyl-CoA carboxylase AC4 and AC5 domains › ACC_central 0.68 53.0 3.72e-01 87.9% 48.0%
3736295 2008.6.1.1 a/b three-layered sandwiches › Restriction endonuclease-like › Acetyl-CoA carboxylase AC4 and AC5 domains › Acetyl-CoA carboxylase AC4 and AC5 domains › ACC_central 0.68 54.0 3.74e-01 89.7% 48.8%
3743107 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.67 46.0 3.51e-01 84.5% 30.0%
3622767 214.1.1.0 a+b two layers › SH2 › SH2 › SH2 0.65 50.0 4.34e-01 94.8% 52.6%
3438374 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.64 47.0 2.96e-01 96.6% 13.5%
3607609 2008.6.1.1 a/b three-layered sandwiches › Restriction endonuclease-like › Acetyl-CoA carboxylase AC4 and AC5 domains › Acetyl-CoA carboxylase AC4 and AC5 domains › ACC_central 0.64 50.0 3.46e-01 89.7% 39.5%
4114694 71.1.1.0 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.63 51.0 3.89e-01 100.0% 37.1%
4998648 4312.1.1.0 a+b two layers › RelE-like › RelE-like › RelE-like 0.63 50.0 4.35e-01 100.0% 55.8%
3600787 2008.6.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Acetyl-CoA carboxylase AC4 and AC5 domains › Acetyl-CoA carboxylase AC4 and AC5 domains 0.62 48.0 3.29e-01 89.7% 56.2%
3924546 214.1.1.0 a+b two layers › SH2 › SH2 › SH2 0.62 49.0 3.87e-01 89.7% 59.2%
3236050 214.1.1.0 a+b two layers › SH2 › SH2 › SH2 0.62 49.0 4.06e-01 89.7% 66.4%
3516114 216.1.1.9 a+b two layers › UBC-like › UBC-like › UBC-like › FANCL_d2 0.62 45.0 3.98e-01 91.4% 52.9%
3897238 12.3.1.42 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › DUF2152 0.61 51.0 3.43e-01 100.0% 61.1%
5048974 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.61 49.0 3.97e-01 100.0% 46.4%
3218512 214.1.1.0 a+b two layers › SH2 › SH2 › SH2 0.61 48.0 4.07e-01 89.7% 72.4%
3484671 3433.1.1.0 a+b duplicates or obligate multimers › ParB dimerization domain › ParB dimerization domain › Plasmid-encoded ParB dimerization domain 0.61 39.0 4.16e-01 72.4% 76.0%
3613616 5.1.4.39 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ANAPC4_WD40 0.60 49.0 3.03e-01 100.0% 13.7%
3682129 5.1.3.68 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF1618 0.60 45.0 2.81e-01 100.0% 13.6%
4989633 3891.1.1.0 a+b two layers › Archaea-specific ribosomal protein L46a › Archaea-specific ribosomal protein L46a › Archaea-specific ribosomal protein L46a 0.59 45.0 4.15e-01 96.6% 62.5%
3240745 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.59 53.0 3.20e-01 100.0% 97.7%
2900859 222.1.1.17 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PKS_DH_N 0.59 49.0 3.99e-01 94.8% 88.7%
3939443 214.1.1.0 a+b two layers › SH2 › SH2 › SH2 0.59 49.0 4.05e-01 94.8% 70.0%
4982570 3604.1.1.1 a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Ni_insertion 0.59 42.0 4.05e-01 93.1% 64.3%
5052270 12.1.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.59 46.0 3.94e-01 86.2% 100.0%
3744517 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.59 51.0 4.07e-01 100.0% 87.5%
5078190 2484.1.1.18 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 0.59 46.0 3.00e-01 86.2% 21.1%
None 0.59 49.0 3.60e-01 98.3% 40.0%
146266 295.1.1.8 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › DUF3276 0.59 46.0 4.14e-01 91.4% 60.7%
5002490 2004.1.1.308 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_21 0.58 46.0 2.81e-01 87.9% 13.6%
3365937 4.8.1.2 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow 0.58 40.0 4.05e-01 100.0% 73.3%
3257603 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.58 49.0 3.98e-01 100.0% 85.8%
5000724 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.58 50.0 4.31e-01 100.0% 83.2%
5011151 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.58 42.0 3.14e-01 79.3% 70.6%
5081581 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.57 44.0 3.04e-01 91.4% 22.2%
3368743 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.57 45.0 4.47e-01 98.3% 83.3%
3713198 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.57 44.0 3.39e-01 98.3% 34.2%
4132235 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.56 46.0 2.99e-01 94.8% 43.2%
3597007 71.1.1.0 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.56 47.0 3.47e-01 100.0% 33.5%
3781032 10.1.1.3 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Calreticulin 0.56 43.0 2.78e-01 84.5% 41.8%
3576754 809.1.1.0 a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP 0.56 46.0 3.90e-01 100.0% 95.5%
3658750 220.1.1.78 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_2 0.56 47.0 3.68e-01 94.8% 63.2%
2169 5.1.2.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_43 0.56 44.0 2.86e-01 91.4% 67.3%
4937915 4312.1.1.0 a+b two layers › RelE-like › RelE-like › RelE-like 0.56 48.0 4.08e-01 100.0% 64.6%
3709987 216.1.1.0 a+b two layers › UBC-like › UBC-like › UBC-like 0.55 44.0 3.50e-01 91.4% 40.8%
5030147 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.55 48.0 3.63e-01 100.0% 88.3%
3390184 206.1.1.55 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › EcKL 0.55 45.0 2.85e-01 100.0% 29.3%
4947615 3604.1.1.0 a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain 0.55 44.0 4.28e-01 94.8% 81.5%
3493637 2004.1.1.73 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 0.55 47.0 3.15e-01 100.0% 34.8%
3351841 220.1.1.78 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_2 0.54 47.0 3.70e-01 100.0% 58.1%
4566232 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.54 41.0 2.70e-01 86.2% 42.0%
3927287 216.1.1.0 a+b two layers › UBC-like › UBC-like › UBC-like 0.54 43.0 3.60e-01 98.3% 48.6%
386453 881.1.1.6 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › Lpp-LpqN 0.54 45.0 3.42e-01 100.0% 83.1%
139759 218.1.1.1 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N 0.54 46.0 3.79e-01 100.0% 75.2%
4992847 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.54 42.0 3.93e-01 100.0% 69.3%
4980165 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.54 40.0 2.46e-01 84.5% 24.1%
3617770 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.53 44.0 3.24e-01 100.0% 97.8%
3818565 881.1.1.1 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP 0.53 46.0 3.43e-01 100.0% 91.6%
3991847 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.52 43.0 3.10e-01 100.0% 95.5%
3778939 59.1.1.15 beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like › ELL 0.52 44.0 3.81e-01 100.0% 78.9%
3601677 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.51 42.0 2.81e-01 100.0% 28.5%
3845580 59.1.1.15 beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like › ELL 0.51 44.0 3.48e-01 100.0% 68.0%
3738504 331.4.1.0 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.51 41.0 3.50e-01 98.3% 62.7%
3997433 2003.1.5.13 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth 0.51 39.0 2.57e-01 94.8% 18.1%
3347865 220.1.1.78 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_2 0.51 44.0 3.52e-01 100.0% 60.0%
4606362 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.50 42.0 3.83e-01 100.0% 70.6%
4998035 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.50 34.0 3.61e-01 81.0% 82.0%