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OP293233.1__UYE89909.1__X__00005

Bact-Vir

OP293233.1__UYE89909.1__X__00005

Identity

Accession:
OP293233 ↗
Kingdom:
phage

Quality

87.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 7-99
PDB
Domain cluster: representative
CATH (20)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7c2xA01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.60 43.0 3.17e-01 100.0% 26.1%
8inpA01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.57 40.0 3.02e-01 74.2% 32.4%
1jmvA00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.57 39.0 3.44e-01 71.0% 62.1%
2wjwA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.57 43.0 3.66e-01 82.8% 85.9%
2wteA01 3.40.50.11700 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.57 38.0 3.40e-01 71.0% 47.1%
3uugA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.57 40.0 3.47e-01 74.2% 98.0%
7va8A01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.55 42.0 3.17e-01 100.0% 30.5%
1uxoA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.54 44.0 3.53e-01 88.2% 86.6%
1usgA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.53 37.0 3.31e-01 74.2% 77.8%
3cs3A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.53 37.0 3.36e-01 74.2% 81.9%
7yosA01 3.90.1640.30 Alpha Beta › Alpha-Beta Complex › inorganic pyrophosphatase (n-terminal core) › 0.53 44.0 3.65e-01 97.8% 74.9%
6lfnA01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.53 41.0 3.08e-01 100.0% 31.0%
4aq4A01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.52 45.0 3.57e-01 98.9% 93.1%
1jvxA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.52 45.0 3.71e-01 100.0% 98.9%
2vyoA00 3.20.20.370 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase/deacetylase 0.51 41.0 3.23e-01 100.0% 39.8%
4r2bA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.51 44.0 3.55e-01 100.0% 89.8%
3dm0A01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.51 44.0 3.01e-01 100.0% 87.0%
5x4kA01 3.90.1640.30 Alpha Beta › Alpha-Beta Complex › inorganic pyrophosphatase (n-terminal core) › 0.51 43.0 3.54e-01 98.9% 75.7%
4ml3D00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.50 38.0 3.45e-01 81.7% 87.0%
3jvdB01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.50 39.0 3.57e-01 82.8% 98.4%
ECOD (18)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4945090 7512.1.1.0 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.60 39.0 3.27e-01 71.0% 35.9%
4480600 2007.1.4.3 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Phosphofructokinase N-terminal domain › NAD_kinase 0.59 31.0 2.97e-01 73.1% 41.8%
4184342 2004.1.1.106 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RapZ-like_N 0.59 52.0 4.39e-01 100.0% 64.4%
3584868 2002.1.1.67 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Pro_dh 0.58 50.0 3.66e-01 100.0% 51.0%
1281145 2007.1.2.5 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Bmp 0.56 40.0 3.95e-01 73.1% 99.0%
4214511 2004.1.1.106 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RapZ-like_N 0.56 49.0 4.15e-01 100.0% 62.4%
4453324 2005.1.1.11 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.56 42.0 3.18e-01 100.0% 31.4%
1874320 7512.1.1.20 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › EryCIII-like_C 0.56 34.0 2.82e-01 73.1% 31.5%
3680000 7516.1.1.1 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transferase 0.55 41.0 3.15e-01 81.7% 98.4%
5040896 7592.1.1.6 a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › Csa3_N 0.55 38.0 3.40e-01 74.2% 48.9%
3915450 2007.1.2.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I 0.53 35.0 3.44e-01 71.0% 60.0%
3059030 2006.1.2.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › DHH phosphoesterases 0.52 44.0 3.62e-01 97.8% 74.1%
3413036 7523.1.1.0 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II 0.52 39.0 3.48e-01 79.6% 82.2%
3635155 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.52 44.0 3.39e-01 95.7% 60.9%
4481436 2007.1.2.10 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_3 0.52 33.0 2.89e-01 100.0% 40.0%
4409943 7523.1.1.0 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II 0.52 30.0 3.35e-01 80.6% 72.0%
3676379 2005.1.1.36 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › SLC12 0.52 39.0 3.04e-01 94.6% 35.0%
3170343 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.50 43.0 3.35e-01 95.7% 57.6%