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OP296522.1__UYD72070.1__VG_p22__00022

Bact-Vir

OP296522.1__UYD72070.1__VG_p22__00022

Identity

Accession:
OP296522 ↗
Kingdom:
phage

Quality

96.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Variovorax_phage_VarioGold

TaxID: 2981550

Cluster

View cluster (15 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 19-87
PDB
Domain cluster: rep: OK624832.1__UFK09586.1__X__00061__D22-87
D2 high residues 95-199
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00959.25 best Phage_lysozyme 74.4 1.50e-20 81.9% 59.2%
CATH (17)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3hdeC00 1.10.530.40 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.94 72.0 5.98e-01 88.6% 50.0%
2anvA00 1.10.530.40 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.94 70.0 6.10e-01 87.6% 54.8%
8hp8A01 1.10.530.40 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.91 78.0 6.76e-01 99.0% 61.4%
6h9dA00 1.10.530.40 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.89 71.0 6.16e-01 88.6% 58.1%
8b2sA01 1.10.530.40 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.88 71.0 6.07e-01 89.5% 56.5%
1xjuA00 1.10.530.40 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.84 72.0 6.12e-01 88.6% 60.3%
4hjzA00 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.61 45.0 3.82e-01 93.3% 45.4%
2guzB00 1.10.287.110 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain 0.57 32.0 3.98e-01 75.2% 89.2%
2pq7A00 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.56 46.0 3.98e-01 90.5% 60.1%
3rjvA02 1.25.40.740 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.56 33.0 4.08e-01 78.1% 96.9%
3akaA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.55 45.0 4.00e-01 91.4% 71.6%
2h5nC00 1.10.3680.10 Mainly Alpha › Orthogonal Bundle › TerB-like › TerB-like 0.55 41.0 3.96e-01 80.0% 85.5%
4mn0A00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.54 45.0 3.77e-01 90.5% 63.0%
1j3eA00 1.20.1380.10 Mainly Alpha › Up-down Bundle › Replication modulator SeqA, C-terminal DNA-binding domain › Replication modulator SeqA, C-terminal DNA-binding domain 0.54 39.0 3.85e-01 76.2% 83.5%
4qmfB01 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.54 37.0 4.03e-01 89.5% 89.0%
3vayA02 1.20.120.1600 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.54 40.0 4.32e-01 79.0% 96.6%
3rm5B01 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.51 41.0 3.07e-01 91.4% 85.1%
ECOD (9)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
136932 235.1.1.6 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Phage_lysozyme 0.96 73.0 6.04e-01 88.6% 49.7%
3944610 235.1.1.6 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Phage_lysozyme 0.93 70.0 5.96e-01 88.6% 51.6%
4834320 235.1.1.6 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Phage_lysozyme 0.93 74.0 7.41e-01 88.6% 81.1%
3033455 235.1.1.6 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Phage_lysozyme 0.91 79.0 6.69e-01 100.0% 59.0%
4019669 235.1.1.6 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Phage_lysozyme 0.87 70.0 5.97e-01 89.5% 56.1%
7422 235.1.1.6 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Phage_lysozyme 0.84 72.0 6.12e-01 88.6% 60.3%
3949298 235.1.1.6 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Phage_lysozyme 0.83 69.0 5.62e-01 88.6% 51.4%
3600416 5050.1.1.0 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter 0.61 49.0 3.87e-01 87.6% 91.6%
4958846 5073.1.1.11 ↗ alpha bundles › Calcium ATPase transmembrane domain-related › Calcium ATPase transmembrane domain-related › Calcium ATPase transmembrane domain M › Cation_ATPase_C 0.55 44.0 3.12e-01 89.5% 86.2%