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OP297178.1__UXR08264.1__X__00152
Bact-VirOP297178.1__UXR08264.1__X__00152
Identity
- Accession:
- OP297178 ↗
- Kingdom:
- phage
Quality
80.9
mean pLDDT
Taxonomy
TaxID: 2983349
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 12-66
Domain cluster:
representative
CATH (34)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1gtdA00 | 3.30.1280.10 | Alpha Beta › 2-Layer Sandwich › Mth169; Chain: A , › Phosphoribosylformylglycinamidine synthase subunit PurS | 0.76 | 64.0 | 5.67e-01 | 96.4% | 97.5% |
| 4kyzA00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.75 | 53.0 | 3.80e-01 | 76.4% | 25.7% |
| 3h20A01 | 3.30.1490.240 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RepB DNA-primase, N-terminal domain | 0.75 | 57.0 | 5.42e-01 | 100.0% | 69.7% |
| 1f94A00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.73 | 48.0 | 4.65e-01 | 94.5% | 60.3% |
| 2qv6A01 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.70 | 62.0 | 4.71e-01 | 100.0% | 70.3% |
| 6kwzA00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.66 | 47.0 | 3.93e-01 | 94.5% | 42.9% |
| 2jvfA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.66 | 53.0 | 4.56e-01 | 98.2% | 55.3% |
| 1qysA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.66 | 53.0 | 4.59e-01 | 98.2% | 56.5% |
| 3au4A02 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.66 | 48.0 | 4.10e-01 | 96.4% | 46.8% |
| 2iboA00 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.65 | 55.0 | 4.79e-01 | 100.0% | 88.8% |
| 1rlhA02 | 3.40.1520.10 | Alpha Beta › 3-Layer(aba) Sandwich › hypothetical protein tt1634 › Ta1353-like | 0.65 | 44.0 | 3.71e-01 | 72.7% | 66.3% |
| 1i1gA02 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.65 | 55.0 | 5.02e-01 | 100.0% | 98.7% |
| 2pjyC00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.64 | 53.0 | 4.77e-01 | 94.5% | 67.1% |
| 3nrbB01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.62 | 49.0 | 4.48e-01 | 98.2% | 97.6% |
| 1t8rA01 | 3.30.1730.10 | Alpha Beta › 2-Layer Sandwich › amp nucleosidase, domain 1 › AMP nucleoside phosphorylase, N-terminal domain | 0.61 | 53.0 | 3.90e-01 | 100.0% | 43.0% |
| 4llgM00 | 3.10.20.510 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › RNA polymerase inhibitor | 0.61 | 47.0 | 4.82e-01 | 100.0% | 100.0% |
| 3egrA00 | 3.10.20.520 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phenylacetic acid degradation B | 0.61 | 50.0 | 4.79e-01 | 100.0% | 81.0% |
| 2jvuA00 | 2.60.40.2290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.61 | 47.0 | 3.99e-01 | 100.0% | 49.0% |
| 1unnC00 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.61 | 50.0 | 4.08e-01 | 100.0% | 47.7% |
| 2mraA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.59 | 48.0 | 3.96e-01 | 100.0% | 50.4% |
| 1nqjB00 | 2.60.120.380 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 45.0 | 3.55e-01 | 96.4% | 40.4% |
| 5cvmA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.59 | 49.0 | 3.10e-01 | 96.4% | 25.3% |
| 2b39A10 | 2.60.120.1540 | Mainly Beta › Sandwich › Jelly Rolls › | 0.58 | 50.0 | 4.00e-01 | 98.2% | 59.5% |
| 3rgzA02 | 3.30.1490.310 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.57 | 47.0 | 4.54e-01 | 98.2% | 83.6% |
| 2wadA02 | 3.90.1310.10 | Alpha Beta › Alpha-Beta Complex › Penicillin-binding protein 2a (Domain 2) › Penicillin-binding protein 2a (Domain 2) | 0.56 | 38.0 | 2.97e-01 | 92.7% | 27.7% |
| 2j3wC00 | 3.30.450.70 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.56 | 41.0 | 3.11e-01 | 80.0% | 79.3% |
| 1nrjA00 | 3.30.450.60 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.55 | 39.0 | 3.03e-01 | 80.0% | 31.3% |
| 3hvnA01 | 3.90.840.10 | Alpha Beta › Alpha-Beta Complex › HIV-1 Reverse Transcriptase; Chain A, domain 3 › Thiol-activated cytolysin superfamily/Thiol-activated cytolysin, alpha-beta domain | 0.53 | 45.0 | 3.24e-01 | 100.0% | 40.1% |
| 3v67A01 | 3.30.450.210 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Two-component sensor protein CpxA, periplasmic domain | 0.53 | 36.0 | 2.97e-01 | 74.5% | 86.0% |
| 2jxtA01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.52 | 43.0 | 3.97e-01 | 100.0% | 77.6% |
| 5lvxC02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.52 | 40.0 | 3.42e-01 | 94.5% | 100.0% |
| 3c9aA03 | 2.20.20.160 | Mainly Beta › Single Sheet › Anthopleurin-A › | 0.52 | 43.0 | 3.99e-01 | 94.5% | 83.1% |
| 2i44B00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.51 | 42.0 | 2.71e-01 | 100.0% | 86.7% |
| 1wktA00 | 2.60.20.20 | Mainly Beta › Sandwich › Gamma-B Crystallin; domain 1 › | 0.50 | 36.0 | 3.12e-01 | 90.9% | 47.7% |
ECOD (32)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3285401 | 3986.2.1.0 ↗ | a+b two layers › GTP-binding protein lepA C-terminal domain-like › Antitoxin Dmd › Antitoxin Dmd | 0.82 | 67.0 | 6.02e-01 | 98.2% | 65.3% |
| 4182592 | 304.44.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S10 › Ribosomal protein S10 › Ribosomal_S10 | 0.79 | 68.0 | 5.15e-01 | 98.2% | 80.8% |
| 3956448 | 304.100.1.1 ↗ | a+b two layers › Alpha-beta plaits › PurS-like › PurS-like › PurS | 0.74 | 63.0 | 5.61e-01 | 96.4% | 97.5% |
| 3622256 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.68 | 59.0 | 4.22e-01 | 96.4% | 34.8% |
| 4951859 | 3110.1.1.3 ↗ | a/b three-layered sandwiches › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain › AglB_core-like | 0.67 | 58.0 | 3.69e-01 | 98.2% | 22.5% |
| 3874464 | 304.48.1.1 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 | 0.65 | 56.0 | 3.45e-01 | 100.0% | 66.2% |
| 4996589 | 3662.1.1.4 ↗ | a+b two layers › Proteasome assembling chaperone 3 (PAC3)-related › Proteasome assembling chaperone 3 (PAC3)-related › Proteasome assembling chaperone 3 (PAC3)-related › PAC_bac | 0.65 | 46.0 | 3.71e-01 | 78.2% | 46.7% |
| 5014007 | 3115.2.1.0 ↗ | a+b two layers › GP2-like › GP2 › GP2 | 0.65 | 52.0 | 5.26e-01 | 100.0% | 89.1% |
| 3210904 | 12.6.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycoside hydrolase family 127 middle domain-related › Glycoside hydrolase family 127 middle domain-related | 0.64 | 56.0 | 4.21e-01 | 98.2% | 47.4% |
| 3692094 | 11.1.1.60 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Vps26 | 0.62 | 54.0 | 3.85e-01 | 100.0% | 52.0% |
| 3941732 | 3115.6.1.0 ↗ | a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon | 0.59 | 43.0 | 4.51e-01 | 94.5% | 90.0% |
| 4648475 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.59 | 48.0 | 4.78e-01 | 98.2% | 98.3% |
| 3999847 | 2007.2.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II | 0.59 | 49.0 | 3.48e-01 | 90.9% | 72.8% |
| 3941935 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.59 | 48.0 | 3.98e-01 | 100.0% | 48.7% |
| 4152762 | 2492.1.1.20 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › APOBEC3 | 0.58 | 45.0 | 3.31e-01 | 96.4% | 28.4% |
| 4924545 | 206.1.3.10 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › CPSase_L_D2 | 0.58 | 44.0 | 3.40e-01 | 100.0% | 34.0% |
| 5012895 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.58 | 46.0 | 4.70e-01 | 98.2% | 94.5% |
| 4013514 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.58 | 49.0 | 4.04e-01 | 100.0% | 57.1% |
| 4033537 | 1119.1.1.1 ↗ | a+b complex topology › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › BioW | 0.58 | 47.0 | 3.23e-01 | 100.0% | 26.1% |
| 2106285 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.57 | 47.0 | 3.93e-01 | 100.0% | 64.8% |
| 4939739 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.56 | 45.0 | 4.50e-01 | 96.4% | 96.6% |
| 4863191 | 3662.1.1.3 ↗ | a+b two layers › Proteasome assembling chaperone 3 (PAC3)-related › Proteasome assembling chaperone 3 (PAC3)-related › Proteasome assembling chaperone 3 (PAC3)-related › PAC4 | 0.56 | 40.0 | 3.30e-01 | 80.0% | 45.1% |
| 3892842 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.55 | 45.0 | 4.39e-01 | 100.0% | 89.2% |
| 4967222 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.55 | 45.0 | 4.44e-01 | 100.0% | 95.0% |
| 4160542 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.55 | 43.0 | 4.34e-01 | 94.5% | 96.6% |
| 5067865 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.55 | 45.0 | 4.31e-01 | 100.0% | 84.3% |
| 3670198 | 221.1.1.4 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PB1 | 0.54 | 41.0 | 3.45e-01 | 98.2% | 46.7% |
| 4951473 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.53 | 44.0 | 4.28e-01 | 100.0% | 93.7% |
| 4061211 | 2484.1.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin | 0.53 | 44.0 | 2.81e-01 | 96.4% | 18.3% |
| 3790328 | 2003.1.5.13 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth | 0.53 | 45.0 | 2.94e-01 | 100.0% | 59.7% |
| 3219557 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.51 | 44.0 | 4.29e-01 | 100.0% | 90.0% |
| 2640865 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.50 | 40.0 | 4.06e-01 | 94.5% | 98.2% |