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OP297532.1__UXE03404.1__SEA_GILBERTA_94__00093
Bact-VirOP297532.1__UXE03404.1__SEA_GILBERTA_94__00093
Identity
- Accession:
- OP297532 ↗
- Kingdom:
- phage
Quality
86.1
mean pLDDT
Taxonomy
TaxID: 2978484
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-56
Domain cluster:
rep: MG009575.1__ATN94076.1__SEA_KUMAO_114__00113__D7-55
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF17441.8 best | DUF5419 | 39.7 | 5.50e-10 | 100.0% | 98.0% |
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ex6A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.65 | 49.0 | 4.51e-01 | 96.0% | 62.7% |
| 4dbgB02 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.65 | 54.0 | 5.14e-01 | 98.0% | 80.3% |
| 3hlzA02 | 1.20.120.1090 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.64 | 52.0 | 4.02e-01 | 98.0% | 54.3% |
| 4gdxA02 | 1.10.246.130 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Gamma-glutamyltranspeptidase, large (L) subunit, C-terminal domain | 0.62 | 51.0 | 4.13e-01 | 100.0% | 73.0% |
| 6p10B02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.62 | 52.0 | 4.39e-01 | 98.0% | 82.4% |
| 1s8nA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 47.0 | 4.52e-01 | 84.0% | 84.5% |
| 8dtqA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.62 | 43.0 | 3.68e-01 | 74.0% | 91.5% |
| 1qo0D02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 48.0 | 4.95e-01 | 84.0% | 100.0% |
| 6wshA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 46.0 | 4.54e-01 | 84.0% | 83.6% |
| 3s6jE02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.60 | 47.0 | 4.29e-01 | 100.0% | 65.2% |
| 6ldkA01 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.59 | 50.0 | 3.54e-01 | 100.0% | 53.5% |
| 2bg1A01 | 3.90.1310.40 | Alpha Beta › Alpha-Beta Complex › Penicillin-binding protein 2a (Domain 2) › | 0.59 | 50.0 | 4.36e-01 | 96.0% | 87.0% |
| 1rp3G02 | 1.20.140.160 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain | 0.59 | 46.0 | 3.39e-01 | 88.0% | 63.4% |
| 1u9pA00 | 1.10.1220.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › Met repressor-like | 0.57 | 45.0 | 3.73e-01 | 90.0% | 82.3% |
| 3t46A00 | 1.20.1270.10 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.57 | 45.0 | 3.91e-01 | 86.0% | 82.7% |
| 4uwqB00 | 2.60.40.2470 | Mainly Beta › Sandwich › Immunoglobulin-like › SoxY domain | 0.57 | 50.0 | 3.86e-01 | 100.0% | 80.2% |
| 7dg2C01 | 1.10.10.1200 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › MAGE homology domain, winged helix WH1 motif | 0.55 | 50.0 | 4.33e-01 | 100.0% | 77.3% |
| 1kxlA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 45.0 | 3.13e-01 | 100.0% | 54.0% |
| 3sqdB01 | 3.40.50.10190 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain | 0.53 | 43.0 | 3.48e-01 | 96.0% | 63.6% |
| 2z0fA03 | 3.40.120.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 › Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 | 0.52 | 41.0 | 3.13e-01 | 90.0% | 96.7% |
| 4ch7A01 | 1.10.10.2890 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.51 | 40.0 | 3.10e-01 | 86.0% | 78.4% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3963295 | 148.1.3.238 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › DUF815 | 0.78 | 67.0 | 6.56e-01 | 96.0% | 94.5% |
| 3369542 | 103.1.1.3 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › CRAL_TRIO_N | 0.74 | 65.0 | 6.13e-01 | 98.0% | 81.7% |
| 3691983 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.73 | 61.0 | 5.99e-01 | 96.0% | 87.3% |
| 5003681 | 2002.1.1.25 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HMGL-like | 0.72 | 58.0 | 3.40e-01 | 90.0% | 15.1% |
| 2774099 | 2006.1.1.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase | 0.69 | 53.0 | 3.46e-01 | 98.0% | 19.3% |
| 3928496 | 143.1.1.0 ↗ | alpha arrays › PABP domain-like › PABC(PABP) domain › PABC(PABP) domain | 0.67 | 56.0 | 5.41e-01 | 100.0% | 90.0% |
| 4489811 | 103.17.1.0 ↗ | alpha arrays › RuvA-C › HMG-CoA reductase flap domain › HMG-CoA reductase flap domain | 0.67 | 54.0 | 5.45e-01 | 100.0% | 98.0% |
| 3287744 | 103.12.1.1 ↗ | alpha arrays › RuvA-C › ANTAR domain › ANTAR domain › ANTAR | 0.66 | 49.0 | 4.66e-01 | 82.0% | 81.7% |
| 3385513 | 148.1.3.238 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › DUF815 | 0.65 | 56.0 | 5.70e-01 | 100.0% | 100.0% |
| 3440167 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.64 | 53.0 | 4.68e-01 | 98.0% | 68.8% |
| 3278934 | 103.12.1.1 ↗ | alpha arrays › RuvA-C › ANTAR domain › ANTAR domain › ANTAR | 0.64 | 55.0 | 5.23e-01 | 100.0% | 95.0% |
| 3951854 | 103.12.1.1 ↗ | alpha arrays › RuvA-C › ANTAR domain › ANTAR domain › ANTAR | 0.62 | 48.0 | 4.57e-01 | 86.0% | 81.7% |
| 2808686 | 103.12.1.1 ↗ | alpha arrays › RuvA-C › ANTAR domain › ANTAR domain › ANTAR | 0.62 | 47.0 | 4.39e-01 | 84.0% | 76.6% |
| 3594325 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.62 | 50.0 | 5.06e-01 | 100.0% | 98.0% |
| 3960463 | 103.12.1.0 ↗ | alpha arrays › RuvA-C › ANTAR domain › ANTAR domain | 0.62 | 47.0 | 4.52e-01 | 86.0% | 81.7% |
| 1282240 | 103.12.1.1 ↗ | alpha arrays › RuvA-C › ANTAR domain › ANTAR domain › ANTAR | 0.61 | 44.0 | 4.21e-01 | 80.0% | 77.0% |
| 3829933 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.60 | 49.0 | 4.73e-01 | 96.0% | 83.3% |
| 3722053 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.60 | 48.0 | 4.26e-01 | 100.0% | 68.2% |
| 4989994 | 6049.1.1.0 ↗ | alpha bundles › PH0832-like › PH0832-like › PH0832-like | 0.57 | 46.0 | 4.10e-01 | 88.0% | 62.9% |
| 3195307 | 109.1.1.37 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › GST_N_2 | 0.56 | 48.0 | 3.21e-01 | 100.0% | 35.9% |
| 5060625 | 2004.1.1.14 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GTP_EFTU | 0.55 | 44.0 | 3.07e-01 | 100.0% | 89.3% |
| 3478592 | 7568.1.1.6 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › RTT107_BRCT_5 | 0.55 | 44.0 | 3.58e-01 | 96.0% | 62.7% |
| 3626178 | 592.7.1.1 ↗ | alpha arrays › PWI domain-like › GIPC1 GH2 domain › GIPC1 GH2 domain › GIPC1_GH2 | 0.53 | 46.0 | 3.87e-01 | 100.0% | 57.8% |
| 4944479 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.53 | 36.0 | 3.16e-01 | 98.0% | 50.0% |