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OP297535.1__UXE03733.1__SEA_OBLADI_10__00010

Bact-Vir

OP297535.1__UXE03733.1__SEA_OBLADI_10__00010

Identity

Accession:
OP297535 ↗
Kingdom:
phage

Quality

83.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Kruegerviridae› Cafassovirus› Gordonia_phage_ObLaDi

TaxID: 2978487

Cluster

View cluster (247 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 15-117
PDB
Domain cluster: rep: KC847113.1__AGK88028.1__PBP180_0013__00013__D3-117
CATH (18)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6toaE01 2.40.10.270 Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein 0.74 65.0 6.66e-01 95.1% 98.0%
3gs9A01 6.20.110.10 Special › Other non-globular › Thrombin, subunit H › 0.71 51.0 5.69e-01 97.1% 97.5%
3p26B02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.64 48.0 4.87e-01 94.2% 80.2%
1r5bA02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.63 43.0 4.60e-01 77.7% 80.9%
4f80A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 41.0 4.27e-01 72.8% 74.2%
5c94A00 2.40.10.250 Mainly Beta › Beta Barrel › Thrombin, subunit H › Replicase NSP9 0.61 44.0 4.26e-01 98.1% 66.4%
2eefA01 2.60.40.2440 Mainly Beta › Sandwich › Immunoglobulin-like › Carbohydrate binding type-21 domain 0.61 40.0 3.70e-01 73.8% 53.5%
2p4bB02 3.30.200.100 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › MucB/RseB, C-terminal domain 0.60 34.0 3.56e-01 74.8% 58.2%
2rjzA02 3.30.70.60 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B 0.60 46.0 4.67e-01 100.0% 83.8%
2bg9C01 2.70.170.10 Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain 0.55 41.0 3.26e-01 77.7% 51.7%
1p97A00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.54 38.0 3.74e-01 73.8% 85.1%
2b02A01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.53 37.0 3.72e-01 72.8% 92.3%
2l25A00 3.30.2000.20 Alpha Beta › 2-Layer Sandwich › STM4215-like › 0.52 47.0 4.24e-01 100.0% 92.2%
1gkuB07 2.60.510.20 Mainly Beta › Sandwich › EV matrix protein fold › 0.52 36.0 3.62e-01 100.0% 71.6%
1d7bA00 2.60.40.1210 Mainly Beta › Sandwich › Immunoglobulin-like › Cellobiose dehydrogenase, cytochrome domain 0.51 36.0 3.02e-01 73.8% 57.3%
1o75A03 2.60.40.1300 Mainly Beta › Sandwich › Immunoglobulin-like › Penicillin-binding protein Tp47, domain C 0.51 35.0 3.32e-01 76.7% 57.8%
8fkmA01 3.30.1460.50 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.51 35.0 3.11e-01 70.9% 81.7%
3wa2X01 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 35.0 3.71e-01 89.3% 82.8%
ECOD (20)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4631894 1.1.12.1 ↗ beta barrels › cradle loop barrel › RIFT-related › barrel domain in QueA-like proteins › Queuosine_synth 0.81 49.0 4.71e-01 100.0% 53.9%
5040464 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.77 52.0 5.41e-01 78.6% 74.7%
2642578 1.1.13.3 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_H_T_join 0.75 68.0 6.66e-01 100.0% 91.8%
4879695 1.1.13.29 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › E217_gp28 0.74 67.0 6.12e-01 100.0% 76.5%
5003311 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.69 63.0 6.22e-01 99.0% 96.4%
3596497 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.68 48.0 4.36e-01 75.7% 55.6%
3949274 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.68 62.0 5.98e-01 100.0% 87.8%
3744748 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.64 44.0 4.56e-01 76.7% 75.8%
3502344 1.1.7.19 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 0.63 44.0 4.58e-01 76.7% 77.9%
4944949 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.62 42.0 3.81e-01 73.8% 50.3%
4949488 1.1.7.19 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 0.62 43.0 4.41e-01 95.1% 74.0%
3389402 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 44.0 4.26e-01 74.8% 68.7%
4988096 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.61 56.0 5.47e-01 100.0% 95.6%
3586477 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.57 51.0 4.30e-01 100.0% 94.9%
4886965 11.1.1.363 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_3 0.55 39.0 3.56e-01 74.8% 54.3%
3701022 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 38.0 3.57e-01 100.0% 61.6%
3575333 11.1.1.97 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.53 30.0 2.33e-01 70.9% 24.9%
3480347 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 36.0 3.56e-01 72.8% 69.1%
3570021 223.1.1.29 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_11 0.50 39.0 3.38e-01 83.5% 67.3%
3635086 868.1.1.8 ↗ a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › SLS1_C 0.50 39.0 2.85e-01 85.4% 74.4%