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OP297535.1__UXE03780.1__SEA_OBLADI_57__00057
Bact-VirOP297535.1__UXE03780.1__SEA_OBLADI_57__00057
Identity
- Accession:
- OP297535 ↗
- Kingdom:
- phage
Quality
75.7
mean pLDDT
Taxonomy
TaxID: 2978487
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 52-118
Domain cluster:
representative
CATH (39)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ldjA03 | 1.20.1310.10 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats | 0.66 | 61.0 | 5.01e-01 | 100.0% | 62.6% |
| 2icwG02 | 1.10.10.530 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › mam-mhc complex, Chain D, Domain 2 | 0.66 | 57.0 | 5.22e-01 | 100.0% | 74.2% |
| 6ks6a01 | 1.10.560.10 | Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain | 0.64 | 57.0 | 3.76e-01 | 100.0% | 62.5% |
| 2kfdA00 | 1.10.10.440 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain | 0.64 | 52.0 | 5.29e-01 | 100.0% | 96.9% |
| 3vw4A01 | 1.10.340.50 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › | 0.63 | 55.0 | 5.01e-01 | 100.0% | 72.8% |
| 4a64C03 | 1.20.1310.10 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats | 0.62 | 56.0 | 4.84e-01 | 98.5% | 66.0% |
| 1yiqA02 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.62 | 51.0 | 4.48e-01 | 95.5% | 74.5% |
| 6i2mB02 | 1.20.1310.10 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats | 0.62 | 54.0 | 4.50e-01 | 100.0% | 57.4% |
| 1gcvB00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.62 | 51.0 | 4.10e-01 | 92.5% | 92.6% |
| 3msyA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.61 | 48.0 | 4.16e-01 | 100.0% | 54.1% |
| 1a00B00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.60 | 51.0 | 4.06e-01 | 98.5% | 93.2% |
| 3ubcA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.60 | 51.0 | 4.19e-01 | 98.5% | 96.2% |
| 6ks6q01 | 1.10.560.10 | Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain | 0.60 | 50.0 | 3.43e-01 | 100.0% | 62.6% |
| 1cqxA01 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.60 | 52.0 | 4.04e-01 | 98.5% | 86.0% |
| 1xo0A01 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.60 | 49.0 | 4.29e-01 | 97.0% | 60.4% |
| 1tu9A00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.60 | 51.0 | 4.14e-01 | 97.0% | 93.9% |
| 3hgkE00 | 1.20.1280.110 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.59 | 49.0 | 4.76e-01 | 95.5% | 100.0% |
| 6b8hO01 | 1.10.520.20 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › N-terminal domain of the delta subunit of the F1F0-ATP synthase | 0.59 | 50.0 | 4.51e-01 | 100.0% | 72.7% |
| 3wfwA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.58 | 42.0 | 3.32e-01 | 76.1% | 41.3% |
| 4a64A02 | 1.20.1310.10 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats | 0.58 | 49.0 | 4.22e-01 | 100.0% | 59.8% |
| 6wk3A00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.58 | 49.0 | 3.94e-01 | 100.0% | 89.0% |
| 1w0bA01 | 1.20.58.420 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › AHSP | 0.57 | 50.0 | 4.53e-01 | 100.0% | 85.9% |
| 4usaA02 | 1.10.150.120 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › [2Fe-2S]-binding domain | 0.57 | 43.0 | 3.69e-01 | 100.0% | 47.9% |
| 3a9fA01 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.57 | 47.0 | 4.72e-01 | 95.5% | 98.5% |
| 2blfB01 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.57 | 45.0 | 4.65e-01 | 91.0% | 98.4% |
| 5k7fA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.57 | 49.0 | 3.95e-01 | 100.0% | 60.1% |
| 3f4mA00 | 1.20.1440.160 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Tumor necrosis factor alpha-induced protein 8-like | 0.57 | 45.0 | 3.55e-01 | 91.0% | 63.6% |
| 1wdhA02 | 1.10.720.60 | Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › | 0.56 | 41.0 | 3.53e-01 | 76.1% | 69.6% |
| 2c42A06 | 3.40.50.970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains | 0.56 | 46.0 | 2.84e-01 | 89.6% | 48.3% |
| 1bqbA02 | 1.10.390.10 | Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2 | 0.55 | 46.0 | 3.68e-01 | 97.0% | 55.6% |
| 1dqeA00 | 1.10.238.20 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain | 0.54 | 45.0 | 3.67e-01 | 97.0% | 99.3% |
| 1m62A00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.54 | 40.0 | 3.72e-01 | 80.6% | 73.6% |
| 2hszA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.53 | 41.0 | 3.97e-01 | 85.1% | 80.0% |
| 1abvA00 | 1.10.520.20 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › N-terminal domain of the delta subunit of the F1F0-ATP synthase | 0.53 | 44.0 | 3.92e-01 | 100.0% | 68.6% |
| 3n5nX01 | 1.10.1670.10 | Mainly Alpha › Orthogonal Bundle › Endonuclease Iii, domain 2 › Helix-hairpin-Helix base-excision DNA repair enzymes (C-terminal) | 0.53 | 46.0 | 3.79e-01 | 98.5% | 57.0% |
| 1f5oA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.52 | 44.0 | 3.56e-01 | 100.0% | 91.9% |
| 3ftdA02 | 1.10.8.100 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › rRNA adenine dimethylase, C-terminal domain | 0.52 | 34.0 | 3.57e-01 | 70.1% | 92.1% |
| 3s6jE02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.51 | 38.0 | 3.83e-01 | 89.6% | 78.3% |
| 3c7jA02 | 1.20.120.530 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like | 0.50 | 36.0 | 2.95e-01 | 80.6% | 69.2% |
ECOD (40)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4014527 | 532.2.1.0 ↗ | alpha arrays › Type III secretion system domain-like › Type III secretion system domains › Type III secretion system domains | 0.68 | 58.0 | 5.17e-01 | 95.5% | 72.6% |
| 3273448 | 593.1.1.1 ↗ | alpha bundles › GroEL equatorial domain-like › GroEL equatorial domain-like › GroEL equatorial domain-like › Cpn60_TCP1 | 0.67 | 60.0 | 4.03e-01 | 100.0% | 65.3% |
| 3741524 | 109.4.1.17 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Cullin | 0.66 | 61.0 | 3.68e-01 | 100.0% | 19.2% |
| 5034944 | 1079.1.1.0 ↗ | alpha complex topology › Transmembrane reductase CcdA › Transmembrane reductase CcdA › Transmembrane reductase CcdA | 0.66 | 55.0 | 3.84e-01 | 100.0% | 71.8% |
| 4143825 | 5046.1.1.123 ↗ | extended segments › F-type ATP synthase subunit b › F-type ATP synthase subunit b › F-type ATP synthase subunit b › OSCP | 0.65 | 57.0 | 3.64e-01 | 100.0% | 20.3% |
| 3505784 | 593.1.1.1 ↗ | alpha bundles › GroEL equatorial domain-like › GroEL equatorial domain-like › GroEL equatorial domain-like › Cpn60_TCP1 | 0.65 | 56.0 | 3.78e-01 | 100.0% | 63.4% |
| 3481180 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.63 | 50.0 | 4.38e-01 | 100.0% | 56.4% |
| 4991314 | 5050.1.1.1 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Sugar_tr | 0.62 | 56.0 | 3.88e-01 | 100.0% | 34.1% |
| 3490219 | 101.1.1.227 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_NOL4_2nd | 0.62 | 49.0 | 4.31e-01 | 97.0% | 57.1% |
| 3733672 | 5050.1.1.1 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Sugar_tr | 0.61 | 55.0 | 3.76e-01 | 100.0% | 33.5% |
| 3518519 | 101.1.17.18 ↗ | alpha arrays › HTH › HTH › FF domain › FF_PRPF40A | 0.61 | 46.0 | 4.82e-01 | 97.0% | 95.0% |
| 3567727 | 593.1.1.1 ↗ | alpha bundles › GroEL equatorial domain-like › GroEL equatorial domain-like › GroEL equatorial domain-like › Cpn60_TCP1 | 0.61 | 51.0 | 3.53e-01 | 100.0% | 61.9% |
| 4169130 | 102.1.1.5 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › SAM_LFY | 0.61 | 49.0 | 4.43e-01 | 91.0% | 64.4% |
| 3595399 | 593.1.1.0 ↗ | alpha bundles › GroEL equatorial domain-like › GroEL equatorial domain-like › GroEL equatorial domain-like | 0.61 | 50.0 | 3.40e-01 | 94.0% | 61.1% |
| 3346187 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.61 | 38.0 | 3.81e-01 | 73.1% | 61.4% |
| 4028138 | 101.1.17.0 ↗ | alpha arrays › HTH › HTH › FF domain | 0.60 | 50.0 | 4.96e-01 | 100.0% | 90.0% |
| 4857815 | 101.1.2.13 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cullin | 0.60 | 52.0 | 3.34e-01 | 100.0% | 20.1% |
| 3236724 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 53.0 | 4.59e-01 | 100.0% | 63.8% |
| 5004344 | 593.1.1.1 ↗ | alpha bundles › GroEL equatorial domain-like › GroEL equatorial domain-like › GroEL equatorial domain-like › Cpn60_TCP1 | 0.59 | 49.0 | 3.47e-01 | 100.0% | 66.3% |
| 4932401 | 3930.1.1.3 ↗ | alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in Hef helicase › Helical bundle in Hef helicase › RNA_helicase_helical | 0.59 | 46.0 | 3.79e-01 | 100.0% | 44.6% |
| 3945879 | 101.38.1.4 ↗ | alpha arrays › HTH › DNA-binding domain of the replication initiator protein ColE2-Rep › DNA-binding domain of the replication initiator protein ColE2-Rep › PriCT_1 | 0.59 | 49.0 | 4.22e-01 | 100.0% | 58.2% |
| 3947893 | 4967.1.1.0 ↗ | alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases | 0.58 | 51.0 | 4.15e-01 | 100.0% | 51.5% |
| 4469265 | 563.1.1.1 ↗ | alpha bundles › ATPD N-terminal domain-like › N-terminal domain of the delta subunit of the F1F0-ATP synthase › N-terminal domain of the delta subunit of the F1F0-ATP synthase › OSCP | 0.58 | 48.0 | 3.71e-01 | 100.0% | 38.8% |
| 4939870 | 593.1.1.1 ↗ | alpha bundles › GroEL equatorial domain-like › GroEL equatorial domain-like › GroEL equatorial domain-like › Cpn60_TCP1 | 0.57 | 49.0 | 3.83e-01 | 100.0% | 45.8% |
| 3760951 | 3930.1.1.0 ↗ | alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in Hef helicase › Helical bundle in Hef helicase | 0.57 | 44.0 | 3.56e-01 | 85.1% | 42.2% |
| 3272954 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.57 | 43.0 | 3.51e-01 | 100.0% | 42.3% |
| 3259148 | 189.1.1.2 ↗ | alpha bundles › GTPase activation domain, GAP › GTPase activation domain, GAP › GTPase activation domain, GAP › RhoGAP | 0.57 | 46.0 | 3.46e-01 | 94.0% | 41.0% |
| 4262528 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.56 | 49.0 | 3.51e-01 | 100.0% | 38.0% |
| 3858480 | 101.1.17.18 ↗ | alpha arrays › HTH › HTH › FF domain › FF_PRPF40A | 0.56 | 44.0 | 4.34e-01 | 98.5% | 84.3% |
| 5035353 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.56 | 42.0 | 2.71e-01 | 80.6% | 35.7% |
| 4995093 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.56 | 49.0 | 3.60e-01 | 100.0% | 38.3% |
| 3453526 | 3930.1.1.0 ↗ | alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in Hef helicase › Helical bundle in Hef helicase | 0.55 | 43.0 | 3.57e-01 | 86.6% | 46.4% |
| 3515847 | 101.11.1.1 ↗ | alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase | 0.55 | 46.0 | 4.20e-01 | 100.0% | 77.9% |
| 3647188 | 3930.1.1.0 ↗ | alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in Hef helicase › Helical bundle in Hef helicase | 0.54 | 41.0 | 3.47e-01 | 88.1% | 47.5% |
| 3910 | 563.1.1.1 ↗ | alpha bundles › ATPD N-terminal domain-like › N-terminal domain of the delta subunit of the F1F0-ATP synthase › N-terminal domain of the delta subunit of the F1F0-ATP synthase › OSCP | 0.53 | 44.0 | 3.92e-01 | 100.0% | 68.6% |
| 3925437 | 601.33.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › CHAD domain › CHAD domain | 0.52 | 42.0 | 3.86e-01 | 94.0% | 84.2% |
| 4019411 | 101.21.1.0 ↗ | alpha arrays › HTH › HTH domain in DNA topoisomerase IV alpha subunit › HTH domain in DNA topoisomerase IV alpha subunit | 0.52 | 46.0 | 4.46e-01 | 100.0% | 94.7% |
| 4948675 | 3930.1.1.3 ↗ | alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in Hef helicase › Helical bundle in Hef helicase › RNA_helicase_helical | 0.52 | 40.0 | 3.16e-01 | 82.1% | 41.4% |
| 4386395 | 563.1.1.1 ↗ | alpha bundles › ATPD N-terminal domain-like › N-terminal domain of the delta subunit of the F1F0-ATP synthase › N-terminal domain of the delta subunit of the F1F0-ATP synthase › OSCP | 0.52 | 43.0 | 3.93e-01 | 100.0% | 73.0% |
| 3691817 | 5050.1.1.1 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Sugar_tr | 0.51 | 45.0 | 3.14e-01 | 100.0% | 68.7% |