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OP297535.1__UXE03857.1__SEA_OBLADI_134__00134

Bact-Vir

OP297535.1__UXE03857.1__SEA_OBLADI_134__00134

Identity

Accession:
OP297535 ↗
Kingdom:
phage

Quality

77.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Kruegerviridae› Cafassovirus› Gordonia_phage_ObLaDi

TaxID: 2978487

Cluster

View cluster (8 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 19-117
PDB
Domain cluster: rep: BK061311.1__DAZ90241.1__PROPHIFSIL01-1_54__00054__D24-110
CATH (18)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1vq0A01 3.55.30.10 Alpha Beta › 3-Layer(bab) Sandwich › Hsp33 domain › Hsp33 domain 0.68 50.0 3.77e-01 76.8% 96.1%
1cnzA00 3.40.718.10 Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase 0.65 46.0 3.15e-01 73.7% 95.9%
1vzyA01 3.55.30.10 Alpha Beta › 3-Layer(bab) Sandwich › Hsp33 domain › Hsp33 domain 0.63 46.0 3.50e-01 76.8% 96.6%
4q66D01 6.20.120.50 Special › Other non-globular › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.59 26.0 3.06e-01 79.8% 56.2%
2vouB01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 48.0 3.70e-01 94.9% 71.7%
2k5nA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 27.0 3.11e-01 79.8% 60.8%
4qdiA02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.55 47.0 3.55e-01 91.9% 88.2%
2wfwB02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 27.0 3.17e-01 79.8% 67.2%
5v6fA00 2.100.10.30 Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Jacalin-like lectin domain 0.55 35.0 3.17e-01 100.0% 45.3%
3mmyA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 39.0 2.71e-01 74.7% 32.2%
3h74A00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.55 47.0 3.40e-01 93.9% 80.9%
7n3yC01 3.60.10.10 Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase 0.55 41.0 2.77e-01 79.8% 72.2%
2rcnA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.54 25.0 3.09e-01 79.8% 67.2%
6bhdA03 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.54 29.0 3.43e-01 74.7% 79.4%
2e6mA00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.53 38.0 3.09e-01 73.7% 89.8%
2dgyA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 25.0 2.80e-01 79.8% 54.4%
1jxhA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.51 44.0 3.28e-01 93.9% 85.5%
1o5zA01 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.51 44.0 3.18e-01 94.9% 83.1%
ECOD (16)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3184736 76.1.1.0 ↗ beta duplicates or obligate multimers › beta-Prism I › beta-Prism I › beta-Prism I 0.65 34.0 3.30e-01 82.8% 43.5%
4512566 2.1.1.60 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RsgI_N 0.61 25.0 3.49e-01 79.8% 80.0%
3230584 2.1.1.318 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF7037 0.59 26.0 3.48e-01 80.8% 78.0%
3212583 76.1.1.0 ↗ beta duplicates or obligate multimers › beta-Prism I › beta-Prism I › beta-Prism I 0.58 39.0 3.90e-01 88.9% 68.0%
4285716 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.57 24.0 3.31e-01 79.8% 78.0%
3316055 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.56 42.0 3.15e-01 79.8% 87.8%
3421524 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.55 42.0 2.83e-01 80.8% 60.5%
4378659 2.1.1.60 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RsgI_N 0.55 25.0 3.33e-01 79.8% 86.7%
3909007 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 42.0 4.13e-01 99.0% 76.4%
4941507 2003.6.1.5 ↗ a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › Phos_pyr_kin 0.53 46.0 3.39e-01 93.9% 86.9%
2538947 309.1.1.4 ↗ a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › Peptidase_M16_C 0.53 39.0 2.98e-01 77.8% 93.5%
3989236 2003.6.1.5 ↗ a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › Phos_pyr_kin 0.53 45.0 3.38e-01 94.9% 86.7%
3624905 2.1.1.253 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF29478 0.52 27.0 3.12e-01 82.8% 68.1%
4128856 2004.1.1.159 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M 0.52 44.0 3.43e-01 92.9% 90.9%
5049906 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.52 30.0 3.60e-01 100.0% 93.3%
3240036 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.51 39.0 2.63e-01 80.8% 89.1%