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OP297535.1__UXE03858.1__SEA_OBLADI_135__00135

Bact-Vir

OP297535.1__UXE03858.1__SEA_OBLADI_135__00135

Identity

Accession:
OP297535 ↗
Kingdom:
phage

Quality

59.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 26-77
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF13384.13 best HTH_23 25.7 1.00e-05 78.8% 76.0%
CATH (45)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2x48A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.90 66.0 6.54e-01 78.8% 74.1%
1y0uA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.88 61.0 5.02e-01 73.1% 42.7%
3vfzB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.87 62.0 5.78e-01 75.0% 63.5%
2r0qC02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.86 67.0 6.65e-01 88.5% 80.0%
1gdtB03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.85 67.0 7.17e-01 94.2% 97.8%
1a04A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 59.0 5.05e-01 73.1% 47.5%
3frwB00 1.10.1270.10 Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › TrpR-like 0.83 67.0 5.41e-01 88.5% 47.9%
2lvsA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.83 60.0 5.94e-01 78.8% 73.2%
2llkA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.81 58.0 6.40e-01 75.0% 100.0%
2o8xA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 56.0 5.34e-01 73.1% 65.6%
2cobA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.77 56.0 5.93e-01 82.7% 93.2%
3k9tA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 53.0 4.95e-01 75.0% 59.1%
2jrtA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 58.0 4.88e-01 82.7% 50.0%
1r71A01 1.10.10.730 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › KorB DNA-binding domain 0.76 58.0 5.74e-01 84.6% 78.6%
3tgnB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 53.0 5.02e-01 75.0% 63.5%
2v9vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 54.0 5.17e-01 78.8% 68.3%
5dukB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 56.0 5.18e-01 88.5% 65.7%
2lvsA02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.73 56.0 5.76e-01 84.6% 89.8%
3g3zA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 53.0 4.96e-01 78.8% 64.1%
2uyyA02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.70 59.0 4.62e-01 100.0% 95.1%
3bddD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 57.0 4.27e-01 92.3% 43.2%
3dkqA02 4.10.860.20 Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › Rabenosyn, Rab binding domain 0.70 48.0 5.02e-01 80.8% 80.9%
4mloA02 1.10.10.1310 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › ToxT, HTH1 motif 0.69 51.0 5.39e-01 80.8% 93.6%
2cfxA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 49.0 5.05e-01 80.8% 82.0%
1hw1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 53.0 4.68e-01 84.6% 68.0%
2id3A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.68 48.0 4.95e-01 76.9% 100.0%
1r1dA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.67 48.0 3.08e-01 76.9% 18.6%
2o38A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.66 53.0 5.00e-01 96.2% 72.3%
3cuoD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 54.0 4.62e-01 100.0% 96.8%
4nvsA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.64 55.0 3.97e-01 98.1% 99.4%
2r3sB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 53.0 4.66e-01 96.2% 95.1%
4e6nA02 6.10.140.1010 Special › Helix non-globular › Helix Hairpins › 0.64 51.0 4.77e-01 90.4% 90.9%
2m8gX00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.61 48.0 4.53e-01 94.2% 70.0%
2pvqA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.61 52.0 4.17e-01 98.1% 59.4%
1bvp101 1.10.250.10 Mainly Alpha › Orthogonal Bundle › Bluetongue Virus 10, subunit 1; domain 1 › Bluetongue Virus 10, subunit 1, domain 1 0.60 44.0 3.45e-01 88.5% 35.0%
4e70A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 48.0 4.09e-01 100.0% 85.1%
2avuB00 1.10.4000.10 Mainly Alpha › Orthogonal Bundle › Flagellar transcriptional activator fold › Flagellar transcriptional activator FlhD 0.60 46.0 3.88e-01 100.0% 46.2%
2cr7A01 1.20.1160.11 Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › Paired amphipathic helix 0.60 42.0 4.08e-01 78.8% 79.4%
3q18A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.59 50.0 3.99e-01 100.0% 69.0%
2b81C00 3.20.20.30 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain 0.58 41.0 2.55e-01 75.0% 11.9%
5hxgB00 1.10.4000.10 Mainly Alpha › Orthogonal Bundle › Flagellar transcriptional activator fold › Flagellar transcriptional activator FlhD 0.58 49.0 4.61e-01 98.1% 81.5%
4dccA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.58 43.0 3.96e-01 86.5% 81.1%
1l0oC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 46.0 4.51e-01 92.3% 93.0%
4asvA00 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.56 43.0 3.82e-01 86.5% 63.3%
3lstA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 47.0 4.07e-01 100.0% 75.6%
ECOD (75)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3477795 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.99 68.0 7.36e-01 71.2% 82.2%
4034495 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.93 65.0 5.01e-01 73.1% 36.2%
3568862 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.93 70.0 6.40e-01 82.7% 63.1%
3988145 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.93 66.0 6.78e-01 75.0% 78.0%
4987653 101.1.2.139 alpha arrays › HTH › HTH › winged helix domain › HTH_23 0.92 66.0 7.06e-01 75.0% 86.7%
5043241 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.91 66.0 7.43e-01 80.8% 100.0%
3922450 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.91 65.0 7.22e-01 75.0% 97.5%
3589152 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.90 64.0 6.85e-01 75.0% 86.7%
3857628 101.1.3.29 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › CENP-B_N 0.90 67.0 6.18e-01 82.7% 63.1%
4943227 101.1.1.63 alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.90 67.0 7.13e-01 82.7% 91.1%
3589359 101.1.1.68 alpha arrays › HTH › HTH › Three-helical HTH › HTH_38 0.90 66.0 7.34e-01 80.8% 100.0%
3163613 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.90 63.0 5.60e-01 73.1% 57.1%
3589184 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.90 65.0 5.70e-01 82.7% 53.3%
4334657 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.89 67.0 7.13e-01 82.7% 91.1%
3210747 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.89 66.0 7.10e-01 82.7% 91.1%
3590732 101.1.1.364 alpha arrays › HTH › HTH › Three-helical HTH › HTH_49 0.89 65.0 6.94e-01 80.8% 88.9%
4927434 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.89 68.0 7.24e-01 88.5% 93.3%
5018585 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.89 66.0 6.53e-01 82.7% 74.5%
3945906 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.89 64.0 7.17e-01 76.9% 100.0%
5024511 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.88 65.0 6.69e-01 82.7% 82.0%
4992594 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.88 62.0 6.60e-01 75.0% 86.7%
5043001 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.87 61.0 4.73e-01 73.1% 36.2%
5077769 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.87 69.0 7.08e-01 86.5% 90.0%
3879118 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.87 64.0 6.35e-01 82.7% 74.5%
4031756 101.1.2.645 alpha arrays › HTH › HTH › winged helix domain › HTH_40 0.87 60.0 5.06e-01 73.1% 44.7%
3989075 101.1.3.11 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_Tnp_ISL3 0.86 60.0 6.69e-01 73.1% 100.0%
3278040 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.86 66.0 6.31e-01 82.7% 71.7%
3603739 101.1.1.498 alpha arrays › HTH › HTH › Three-helical HTH › LAGLIDADG_3 0.86 78.0 4.69e-01 100.0% 22.5%
3925603 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.86 64.0 6.54e-01 80.8% 82.0%
4970998 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.86 74.0 5.81e-01 92.3% 49.0%
1159643 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.86 67.0 6.04e-01 88.5% 62.0%
5050152 101.1.3.35 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › Terminase_5 0.86 69.0 7.08e-01 90.4% 90.0%
3590553 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.86 67.0 6.84e-01 90.4% 86.0%
4367286 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.86 62.0 6.92e-01 76.9% 100.0%
3938462 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.85 63.0 5.40e-01 80.8% 51.2%
4928270 101.1.6.12 alpha arrays › HTH › HTH › TrpR › HTH_23 0.85 59.0 6.26e-01 73.1% 86.7%
3587644 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.85 66.0 6.35e-01 88.5% 73.3%
4139052 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.85 59.0 5.17e-01 73.1% 50.7%
4031535 101.1.1.275 alpha arrays › HTH › HTH › Three-helical HTH › GerE 0.85 59.0 5.61e-01 73.1% 65.0%
5006645 101.1.1.63 alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.84 65.0 6.23e-01 90.4% 71.7%
4054648 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.84 75.0 7.43e-01 100.0% 94.5%
3962903 101.1.2.486 alpha arrays › HTH › HTH › winged helix domain › HTH_58 0.84 60.0 6.63e-01 78.8% 100.0%
5063318 101.1.6.12 alpha arrays › HTH › HTH › TrpR › HTH_23 0.84 71.0 6.99e-01 94.2% 87.3%
4952807 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.84 70.0 6.10e-01 92.3% 62.7%
3789627 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.84 67.0 6.21e-01 90.4% 69.2%
4162857 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.83 66.0 6.76e-01 94.2% 90.0%
3984987 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.83 58.0 6.51e-01 78.8% 100.0%
3288492 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.83 60.0 6.30e-01 78.8% 88.9%
3287536 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.82 63.0 6.71e-01 82.7% 95.6%
5030780 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.82 62.0 6.31e-01 84.6% 86.0%
3981541 101.1.1.243 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Rpn_C 0.82 71.0 7.02e-01 96.2% 90.9%
4008959 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.81 72.0 7.15e-01 100.0% 96.4%
4010659 101.1.1.243 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Rpn_C 0.81 64.0 4.61e-01 86.5% 58.6%
3971636 101.28.1.0 alpha arrays › HTH › helical bundles in FlhC-like proteins › helical bundles in FlhC-like proteins 0.80 58.0 6.43e-01 76.9% 100.0%
5053505 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.80 64.0 6.51e-01 92.3% 94.0%
4133453 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.80 59.0 5.87e-01 80.8% 81.8%
4941605 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.80 58.0 6.38e-01 76.9% 100.0%
3981690 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.79 54.0 4.46e-01 73.1% 42.1%
5034272 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 56.0 4.70e-01 75.0% 47.1%
4964802 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.78 62.0 5.91e-01 86.5% 76.7%
4008322 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.78 67.0 6.56e-01 94.2% 87.3%
4418437 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.77 66.0 6.15e-01 98.1% 83.1%
4952035 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.76 69.0 6.59e-01 100.0% 88.3%
4965812 101.1.1.559 alpha arrays › HTH › HTH › Three-helical HTH › DUF7858 0.74 54.0 5.35e-01 80.8% 74.5%
3391053 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.73 53.0 5.58e-01 80.8% 91.1%
3933366 101.1.6.12 alpha arrays › HTH › HTH › TrpR › HTH_23 0.72 64.0 5.80e-01 100.0% 84.3%
3329805 101.1.1.30 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 0.72 54.0 3.80e-01 80.8% 29.4%
5002651 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.72 59.0 4.85e-01 92.3% 50.5%
3985633 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.71 53.0 5.23e-01 88.5% 78.2%
5051680 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.70 60.0 5.29e-01 100.0% 71.2%
5072014 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.70 59.0 5.24e-01 100.0% 66.7%
5071227 2005.1.1.18 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase 0.67 56.0 3.49e-01 94.2% 56.7%
3920862 101.1.1.221 alpha arrays › HTH › HTH › Three-helical HTH › CCDC106 0.67 54.0 5.51e-01 90.4% 98.0%
3497897 3939.1.1.0 alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain 0.66 54.0 4.89e-01 90.4% 80.0%
3979732 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.63 49.0 4.70e-01 92.3% 80.0%