←Back to structures
OP297541.2__UXE04394.1__SEA_FUNSIZED_23__00023
Bact-VirOP297541.2__UXE04394.1__SEA_FUNSIZED_23__00023
Identity
- Accession:
- OP297541 ↗
- Kingdom:
- phage
Quality
75.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-64
Domain cluster:
rep: MN586020.1__QGJ92747.1__PBI_MEGAN_77__00077__D30-86
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ofuA02 | 3.30.1330.20 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Tubulin/FtsZ, C-terminal domain | 0.64 | 42.0 | 3.57e-01 | 81.0% | 41.9% |
| 7cunF01 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.57 | 46.0 | 3.19e-01 | 98.3% | 25.0% |
| 2q3fA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 47.0 | 3.47e-01 | 100.0% | 52.5% |
| 1ga6A00 | 3.40.50.200 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidase S8/S53 domain | 0.56 | 47.0 | 2.94e-01 | 98.3% | 27.1% |
| 3e02A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.55 | 44.0 | 2.82e-01 | 89.7% | 97.1% |
| 2vhaA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.55 | 46.0 | 3.31e-01 | 96.6% | 37.2% |
| 4cu7A03 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.55 | 46.0 | 2.87e-01 | 94.8% | 45.1% |
| 1xpjA00 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.55 | 44.0 | 3.58e-01 | 94.8% | 68.5% |
| 3fovA00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.55 | 46.0 | 3.87e-01 | 100.0% | 54.9% |
| 1lbqA02 | 3.40.50.1400 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.54 | 43.0 | 3.47e-01 | 100.0% | 47.5% |
| 4gc3A00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.53 | 44.0 | 2.97e-01 | 100.0% | 84.0% |
| 3qtgA01 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.53 | 45.0 | 3.02e-01 | 96.6% | 76.2% |
| 1rtqA00 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.53 | 42.0 | 2.82e-01 | 96.6% | 64.6% |
| 1pyoC00 | 3.40.50.1460 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 43.0 | 3.31e-01 | 100.0% | 36.0% |
| 2wq7A01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.52 | 42.0 | 3.36e-01 | 96.6% | 41.6% |
| 3pe5A00 | 3.40.630.190 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › LCP protein | 0.52 | 42.0 | 2.84e-01 | 100.0% | 67.5% |
| 3i3fB00 | 3.30.1330.40 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › RutC-like | 0.51 | 42.0 | 3.25e-01 | 96.6% | 40.6% |
| 4oa3A00 | 3.10.310.50 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › | 0.51 | 36.0 | 2.83e-01 | 77.6% | 33.3% |
| 1qe5A00 | 3.40.50.1580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain | 0.51 | 42.0 | 2.83e-01 | 100.0% | 72.6% |
| 6ifdB00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.51 | 41.0 | 2.90e-01 | 100.0% | 35.9% |
| 1ccwB01 | 3.20.20.240 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Methylmalonyl-CoA mutase | 0.51 | 41.0 | 2.54e-01 | 94.8% | 30.5% |
| 3do8A00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.51 | 43.0 | 3.34e-01 | 96.6% | 44.4% |
| 1kfqA01 | 3.40.120.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 › Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 | 0.50 | 42.0 | 2.97e-01 | 100.0% | 69.6% |
| 5vazA02 | 3.40.1360.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dna Topoisomerase Vi A Subunit; Chain: A, domain 2 › | 0.50 | 41.0 | 3.34e-01 | 100.0% | 50.0% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3252502 | 2008.2.1.2 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like › Sen15 | 0.62 | 46.0 | 3.69e-01 | 100.0% | 38.7% |
| 4932315 | 7565.1.1.1 ↗ | a/b three-layered sandwiches › Resolvase-like › Resolvase-like › Resolvase-like › Resolvase | 0.57 | 45.0 | 3.50e-01 | 98.3% | 36.0% |
| 5013125 | 327.6.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Fe-S cluster assembly (FSCA) domain-like › Fe-S cluster assembly (FSCA) domain-like › FeS_assembly_P | 0.57 | 43.0 | 3.73e-01 | 100.0% | 50.5% |
| 3456832 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.57 | 45.0 | 3.13e-01 | 89.7% | 86.3% |
| 5011559 | 2003.1.5.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Met_10 | 0.57 | 42.0 | 2.85e-01 | 100.0% | 19.0% |
| 4670642 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.57 | 48.0 | 3.98e-01 | 100.0% | 52.2% |
| 4261280 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.56 | 48.0 | 3.88e-01 | 100.0% | 51.7% |
| 3594802 | 2492.1.1.0 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.56 | 46.0 | 3.41e-01 | 100.0% | 58.3% |
| 3781860 | 2007.2.3.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase2 | 0.55 | 45.0 | 3.28e-01 | 98.3% | 36.2% |
| 4659593 | 2484.1.1.40 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvX | 0.55 | 45.0 | 3.51e-01 | 96.6% | 87.1% |
| 3730197 | 327.7.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer | 0.55 | 37.0 | 3.29e-01 | 79.3% | 46.7% |
| 3305306 | 246.2.1.0 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases | 0.55 | 44.0 | 3.20e-01 | 100.0% | 29.2% |
| 4928951 | 327.7.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › FKBP26_C | 0.54 | 38.0 | 3.65e-01 | 86.2% | 61.4% |
| 3271471 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.54 | 46.0 | 3.46e-01 | 96.6% | 70.0% |
| 4670340 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.54 | 45.0 | 3.78e-01 | 100.0% | 57.9% |
| 3313216 | 2007.1.6.14 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Aminoacid dehydrogenase-like, N-terminal domain › PF31181 | 0.54 | 44.0 | 3.42e-01 | 98.3% | 41.9% |
| 4651783 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.54 | 46.0 | 3.60e-01 | 100.0% | 51.1% |
| 4315832 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.54 | 44.0 | 3.72e-01 | 100.0% | 55.7% |
| 4306163 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.54 | 46.0 | 3.76e-01 | 100.0% | 53.0% |
| None | — | 0.54 | 43.0 | 3.26e-01 | 93.1% | 72.9% | |
| 4076693 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.53 | 45.0 | 3.71e-01 | 100.0% | 52.2% |
| 3960695 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.53 | 43.0 | 3.36e-01 | 100.0% | 87.1% |
| 5044149 | 2004.1.1.85 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ArsA_ATPase | 0.53 | 43.0 | 2.84e-01 | 100.0% | 21.6% |
| 3461013 | 2002.1.1.106 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD | 0.53 | 42.0 | 3.04e-01 | 96.6% | 69.3% |
| 4569149 | 7516.1.1.11 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › CTP_transf_3 | 0.52 | 44.0 | 2.98e-01 | 100.0% | 33.3% |
| 3474700 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.52 | 41.0 | 2.92e-01 | 94.8% | 40.9% |
| 4239378 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.51 | 42.0 | 3.47e-01 | 100.0% | 52.0% |
| 3618215 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.51 | 44.0 | 2.64e-01 | 100.0% | 14.2% |
| 3690976 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.51 | 41.0 | 2.85e-01 | 100.0% | 86.0% |
| 4332382 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.51 | 43.0 | 3.51e-01 | 100.0% | 54.6% |
| 5002743 | 2498.1.1.1 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M10 | 0.51 | 40.0 | 3.02e-01 | 98.3% | 33.5% |