←Back to structures
OP297541.2__UXE04466.1__SEA_FUNSIZED_1__00001
Bact-VirOP297541.2__UXE04466.1__SEA_FUNSIZED_1__00001
Identity
- Accession:
- OP297541 ↗
- Kingdom:
- phage
Quality
89.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 176-414
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF20314.4 best | DUF6610 | 113.6 | 1.30e-32 | 88.7% | 86.4% |
CATH (42)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1efzA00 | 3.20.20.105 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Queuine tRNA-ribosyltransferase-like | 0.80 | 76.0 | 6.44e-01 | 100.0% | 91.7% |
| 2p10C01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.70 | 54.0 | 5.42e-01 | 79.1% | 94.7% |
| 7pd2B01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.69 | 64.0 | 5.56e-01 | 99.2% | 79.3% |
| 3lyeA00 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.68 | 59.0 | 5.57e-01 | 91.6% | 86.7% |
| 4mzyA02 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.67 | 47.0 | 5.53e-01 | 92.9% | 100.0% |
| 1n7kA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.67 | 60.0 | 6.07e-01 | 99.6% | 95.3% |
| 5t9gB03 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.67 | 62.0 | 5.56e-01 | 98.3% | 96.9% |
| 3oa3A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.66 | 59.0 | 5.79e-01 | 99.6% | 88.5% |
| 2qhaA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.66 | 61.0 | 5.41e-01 | 99.2% | 88.4% |
| 3eb2A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.65 | 59.0 | 5.50e-01 | 94.6% | 100.0% |
| 2gjlA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.65 | 61.0 | 5.49e-01 | 100.0% | 96.3% |
| 1u1jA01 | 3.20.20.210 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › | 0.65 | 59.0 | 4.95e-01 | 97.5% | 91.3% |
| 1vhnA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.64 | 57.0 | 5.80e-01 | 97.9% | 96.6% |
| 1uumA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.64 | 59.0 | 5.16e-01 | 99.2% | 83.4% |
| 1jqxA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.63 | 59.0 | 5.69e-01 | 99.6% | 93.3% |
| 2nv9D02 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.63 | 54.0 | 5.59e-01 | 95.0% | 94.7% |
| 5dmmA00 | 3.20.20.330 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Homocysteine-binding-like domain | 0.63 | 58.0 | 5.43e-01 | 97.1% | 97.2% |
| 2l69A00 | 3.40.50.11230 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.62 | 29.0 | 3.79e-01 | 94.6% | 77.6% |
| 3qoyA02 | 3.40.50.790 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Ribosomal protein L1/L10, domain II | 0.59 | 25.0 | 3.94e-01 | 99.6% | 100.0% |
| 3d3aA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.59 | 55.0 | 5.23e-01 | 99.2% | 94.9% |
| 5j60B02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.58 | 27.0 | 3.81e-01 | 74.1% | 88.3% |
| 3mcnB02 | 3.20.20.20 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like | 0.58 | 52.0 | 5.22e-01 | 98.3% | 95.0% |
| 3f8dA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.57 | 28.0 | 3.77e-01 | 74.1% | 88.6% |
| 4bucA03 | 3.90.190.20 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain | 0.57 | 31.0 | 4.16e-01 | 90.8% | 99.2% |
| 1ojxE00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.56 | 50.0 | 5.00e-01 | 96.7% | 99.2% |
| 4wjmA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.56 | 40.0 | 3.68e-01 | 72.4% | 98.4% |
| 3ks6A00 | 3.20.20.190 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase | 0.55 | 50.0 | 4.95e-01 | 97.1% | 99.6% |
| 2cb0A01 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.55 | 29.0 | 3.49e-01 | 77.0% | 74.7% |
| 4e4tB01 | 3.40.50.20 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.54 | 24.0 | 3.44e-01 | 72.8% | 86.7% |
| 2xciC01 | 3.40.50.11720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 3-Deoxy-D-manno-octulosonic-acid transferase, N-terminal domain | 0.54 | 31.0 | 3.62e-01 | 76.2% | 78.8% |
| 7ec2A01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.54 | 33.0 | 3.96e-01 | 100.0% | 93.4% |
| 3tbfA02 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.53 | 32.0 | 4.00e-01 | 96.7% | 96.0% |
| 4c12A03 | 3.90.190.20 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain | 0.53 | 35.0 | 4.21e-01 | 90.4% | 99.4% |
| 3l6dA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 34.0 | 4.01e-01 | 95.0% | 93.9% |
| 4ywrA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.52 | 40.0 | 4.09e-01 | 79.1% | 83.8% |
| 2rirA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 31.0 | 3.84e-01 | 80.8% | 94.6% |
| 3hg7A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 27.0 | 3.62e-01 | 74.5% | 94.4% |
| 3re1A02 | 3.40.50.10090 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 26.0 | 3.46e-01 | 74.9% | 88.3% |
| 3ibtA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 37.0 | 4.05e-01 | 72.8% | 96.4% |
| 3ksrA02 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 38.0 | 3.99e-01 | 75.3% | 97.2% |
| 4iscA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 30.0 | 3.65e-01 | 95.8% | 87.8% |
| 2bd0A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.50 | 39.0 | 3.94e-01 | 78.2% | 83.8% |
ECOD (51)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4961834 | 2002.1.1.458 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DUF6610 | 0.81 | 78.0 | 7.65e-01 | 100.0% | 94.8% |
| 3719900 | 2002.1.1.73 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TGT | 0.80 | 76.0 | 6.17e-01 | 100.0% | 88.4% |
| 5049216 | 2002.1.1.73 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TGT | 0.80 | 76.0 | 6.52e-01 | 100.0% | 87.6% |
| 3262675 | 2002.1.1.73 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TGT | 0.80 | 76.0 | 6.36e-01 | 100.0% | 92.6% |
| 5079320 | 2002.1.1.452 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM_C | 0.72 | 53.0 | 4.85e-01 | 74.9% | 97.4% |
| 5049947 | 2002.1.1.452 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM_C | 0.71 | 53.0 | 4.52e-01 | 75.7% | 81.1% |
| 4971179 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.71 | 66.0 | 5.78e-01 | 99.6% | 87.1% |
| 3595107 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.67 | 59.0 | 5.62e-01 | 97.5% | 80.4% |
| 4573973 | 2002.1.1.76 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DeoC | 0.67 | 59.0 | 6.10e-01 | 99.2% | 98.2% |
| 4384157 | 2002.1.1.76 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DeoC | 0.67 | 58.0 | 6.06e-01 | 98.7% | 100.0% |
| 4482273 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.67 | 58.0 | 6.06e-01 | 99.6% | 99.5% |
| 3604114 | 2002.1.1.122 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM,BATS | 0.66 | 62.0 | 5.37e-01 | 100.0% | 80.6% |
| 4980155 | 2002.1.1.76 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DeoC | 0.66 | 59.0 | 5.68e-01 | 100.0% | 83.3% |
| 5000526 | 2002.1.1.76 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DeoC | 0.66 | 60.0 | 6.10e-01 | 99.6% | 98.7% |
| 347589 | 2002.1.1.29 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS | 0.65 | 59.0 | 5.51e-01 | 95.0% | 100.0% |
| 4952497 | 2002.1.1.66 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHquinase_I | 0.65 | 57.0 | 5.90e-01 | 99.2% | 98.2% |
| 4541672 | 2002.1.1.76 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DeoC | 0.65 | 60.0 | 6.07e-01 | 100.0% | 99.1% |
| 5025578 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.64 | 59.0 | 5.18e-01 | 99.6% | 92.8% |
| 5018580 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.64 | 48.0 | 4.65e-01 | 76.6% | 100.0% |
| 4376564 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.64 | 60.0 | 5.94e-01 | 99.6% | 99.2% |
| 4953342 | 2002.1.1.76 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DeoC | 0.63 | 58.0 | 5.88e-01 | 99.6% | 97.5% |
| 4975884 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.63 | 57.0 | 5.19e-01 | 96.2% | 96.5% |
| 4933365 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.63 | 47.0 | 4.15e-01 | 75.3% | 87.8% |
| 5035070 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.62 | 45.0 | 4.73e-01 | 74.5% | 95.9% |
| 5027163 | 2002.1.1.76 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DeoC | 0.61 | 45.0 | 5.11e-01 | 75.7% | 98.9% |
| 4960360 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.61 | 56.0 | 5.00e-01 | 99.6% | 92.4% |
| 3965602 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.61 | 52.0 | 4.82e-01 | 90.4% | 99.7% |
| 3275807 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.61 | 52.0 | 4.64e-01 | 90.8% | 99.1% |
| 5051584 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.61 | 44.0 | 4.43e-01 | 73.6% | 100.0% |
| 4954342 | 2002.1.1.224 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › SPASM | 0.60 | 56.0 | 4.87e-01 | 100.0% | 81.7% |
| 5078115 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.60 | 54.0 | 4.60e-01 | 97.1% | 87.5% |
| 3478354 | 2002.1.1.83 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 | 0.60 | 55.0 | 4.52e-01 | 99.6% | 95.2% |
| 5022670 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.59 | 43.0 | 3.99e-01 | 72.4% | 84.7% |
| 4987728 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.59 | 44.0 | 4.31e-01 | 75.7% | 94.5% |
| 4971176 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.58 | 53.0 | 4.93e-01 | 97.5% | 92.0% |
| 5036843 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.58 | 41.0 | 4.13e-01 | 72.0% | 92.7% |
| 5049630 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.57 | 30.0 | 3.73e-01 | 75.3% | 80.7% |
| 5042766 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.55 | 50.0 | 4.88e-01 | 97.1% | 99.2% |
| 428389 | 7512.1.1.23 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_52 | 0.55 | 26.0 | 3.37e-01 | 71.1% | 76.5% |
| 3237556 | 2007.5.1.23 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › SGNH | 0.54 | 39.0 | 3.78e-01 | 73.2% | 92.2% |
| 3974627 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.54 | 30.0 | 3.44e-01 | 97.9% | 70.9% |
| 3924269 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.53 | 32.0 | 3.21e-01 | 97.1% | 56.3% |
| 4312495 | 7512.1.1.9 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › LpxB | 0.53 | 36.0 | 3.89e-01 | 83.7% | 81.5% |
| 2037948 | 2003.1.1.19 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › AlaDh_PNT_C | 0.52 | 32.0 | 3.87e-01 | 89.1% | 95.2% |
| 4026659 | 7579.1.1.42 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Hydrolase_4 | 0.52 | 38.0 | 3.76e-01 | 73.2% | 85.6% |
| 3806357 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.52 | 26.0 | 3.35e-01 | 77.0% | 81.4% |
| 4927855 | 7563.1.1.8 ↗ | a/b three-layered sandwiches › MCP/YpsA-related › MCP/YpsA-related › MCP/YpsA-related › LDcluster4 | 0.52 | 37.0 | 4.15e-01 | 98.3% | 96.1% |
| 3165902 | 7512.1.1.23 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_52 | 0.51 | 27.0 | 3.68e-01 | 93.7% | 100.0% |
| 5073259 | 7512.1.1.30 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 | 0.51 | 36.0 | 3.90e-01 | 84.1% | 85.0% |
| 4949085 | 7573.1.1.2 ↗ | a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran_N | 0.51 | 37.0 | 3.55e-01 | 75.3% | 98.6% |
| 4970882 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.51 | 46.0 | 4.12e-01 | 97.5% | 96.4% |
D2
medium
residues 12-113
Domain cluster:
rep: MW960030.1__QWY82978.1__X__00024__D5-103