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OP297545.1__UXE04767.1__SEA_SHAMBRE1_31__00031

Bact-Vir

OP297545.1__UXE04767.1__SEA_SHAMBRE1_31__00031

Identity

Accession:
OP297545 ↗
Kingdom:
phage

Quality

89.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-71
PDB
CATH (45)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3c4sA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.80 59.0 6.41e-01 97.1% 94.7%
1m1gB03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.79 56.0 5.92e-01 92.9% 82.5%
3p8bB02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.77 58.0 6.12e-01 97.1% 90.3%
3pmiA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.72 49.0 5.12e-01 90.0% 76.9%
1vq8Q00 2.30.30.70 Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 0.71 57.0 5.13e-01 94.3% 64.2%
2v1qA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 56.0 5.99e-01 92.9% 100.0%
3h41A02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 57.0 5.81e-01 92.9% 92.6%
2eqmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 50.0 5.53e-01 91.4% 100.0%
2egcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 56.0 5.48e-01 94.3% 81.3%
1x6gA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 56.0 5.34e-01 92.9% 75.3%
6gbuD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 56.0 5.85e-01 95.7% 100.0%
1ib8A02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.66 50.0 5.11e-01 97.1% 86.6%
2lccA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.66 52.0 5.06e-01 94.3% 77.6%
2kxcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 53.0 5.41e-01 92.9% 91.0%
2kgtA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 55.0 5.47e-01 95.7% 88.9%
4epcA02 2.30.30.170 Mainly Beta › Roll › SH3 type barrels. › 0.64 54.0 5.40e-01 91.4% 95.8%
2af5A01 2.40.128.160 Mainly Beta › Beta Barrel › Lipocalin › C1 set domains (antibody constant domain-like) 0.63 41.0 4.53e-01 90.0% 85.2%
1v1cA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 54.0 5.48e-01 95.7% 98.5%
2grgA01 3.40.1840.10 Alpha Beta › 3-Layer(aba) Sandwich › Profilin-like › YNR034W-A-like 0.58 44.0 4.23e-01 82.9% 98.8%
4mveA00 2.40.128.580 Mainly Beta › Beta Barrel › Lipocalin › GXWXG domain 0.58 45.0 3.62e-01 85.7% 80.3%
3agjF01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.58 50.0 4.15e-01 98.6% 63.0%
2cm4A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 45.0 3.58e-01 85.7% 74.5%
3fg8A00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.57 42.0 3.69e-01 78.6% 98.1%
2lsmA00 3.40.5.70 Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L9; domain 1 › DNA packaging chaperone protein FI, C-terminal beta-strand domain 0.56 40.0 4.21e-01 92.9% 85.2%
3frnA01 3.10.129.70 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › 0.56 42.0 3.37e-01 80.0% 46.0%
2hx0A01 3.30.1330.80 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 0.55 45.0 3.80e-01 95.7% 54.5%
3es4A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.55 40.0 3.48e-01 100.0% 47.4%
3g1jA00 2.30.30.350 Mainly Beta › Roll › SH3 type barrels. › mobile metagenome of vibrio cholerae. Integron cassette protein vch_cass4. 0.55 45.0 4.17e-01 91.4% 86.7%
2dmwA01 3.30.450.50 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin domain 0.55 40.0 3.44e-01 78.6% 61.2%
5h5oA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.55 43.0 3.61e-01 97.1% 48.8%
3bcwA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.54 39.0 3.52e-01 100.0% 52.9%
4mxtA00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.54 43.0 3.21e-01 88.6% 73.8%
3holA04 2.40.160.90 Mainly Beta › Beta Barrel › Porin › 0.54 46.0 3.71e-01 98.6% 91.7%
2a5zA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 46.0 3.27e-01 100.0% 56.9%
3ht1A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.53 41.0 3.29e-01 100.0% 40.8%
5by5A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.53 39.0 3.45e-01 100.0% 51.3%
3ulbA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 42.0 4.07e-01 92.9% 85.5%
3v8uA04 2.40.160.90 Mainly Beta › Beta Barrel › Porin › 0.52 44.0 3.57e-01 98.6% 95.0%
2oqcA00 3.60.60.10 Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A 0.52 43.0 2.85e-01 95.7% 89.0%
1tc5C00 3.50.80.10 Alpha Beta › 3-Layer(bba) Sandwich › D-tyrosyl-trna(Tyr) Deacylase; Chain: A; › D-tyrosyl-tRNA(Tyr) deacylase 0.51 43.0 3.27e-01 97.1% 98.4%
2opkB01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.51 39.0 3.60e-01 100.0% 62.8%
2bnmA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.51 39.0 3.30e-01 82.9% 95.0%
2kr7A02 2.40.10.330 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.50 31.0 3.32e-01 78.6% 73.7%
2qmiA02 2.40.128.210 Mainly Beta › Beta Barrel › Lipocalin › Pab87 octamerisation domain 0.50 40.0 3.61e-01 88.6% 83.0%
3kh8A02 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.50 38.0 3.20e-01 85.7% 87.2%
ECOD (76)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4177200 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.83 58.0 6.45e-01 94.3% 92.7%
4101502 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.83 57.0 6.35e-01 92.9% 92.6%
3976834 4.1.1.156 beta barrels › SH3 › SH3 › SH3 › DUF2158 0.81 52.0 6.03e-01 91.4% 92.0%
4059465 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.81 59.0 5.98e-01 94.3% 77.9%
3941391 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.81 53.0 5.68e-01 88.6% 78.3%
959119 4.1.1.75 beta barrels › SH3 › SH3 › SH3 › NdhS 0.81 57.0 6.43e-01 92.9% 96.3%
3440094 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.81 59.0 6.33e-01 95.7% 90.0%
4932609 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.80 60.0 6.23e-01 95.7% 84.6%
4461457 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.80 57.0 5.95e-01 92.9% 81.2%
3675511 4.1.1.75 beta barrels › SH3 › SH3 › SH3 › NdhS 0.79 59.0 5.63e-01 97.1% 68.8%
3416068 4.1.1.187 beta barrels › SH3 › SH3 › SH3 › DIRP 0.79 60.0 4.60e-01 95.7% 36.8%
5042892 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.79 58.0 6.23e-01 95.7% 91.7%
3485965 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.78 54.0 5.78e-01 94.3% 85.0%
3456496 4.1.1.75 beta barrels › SH3 › SH3 › SH3 › NdhS 0.77 58.0 4.83e-01 97.1% 47.8%
1394554 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.77 58.0 6.05e-01 97.1% 87.5%
4112177 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.76 55.0 5.69e-01 94.3% 81.5%
3233461 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.76 60.0 6.47e-01 92.9% 100.0%
3554670 4.1.1.340 beta barrels › SH3 › SH3 › SH3 › PF28930 0.76 66.0 5.95e-01 95.7% 81.1%
3847592 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.75 54.0 3.26e-01 92.9% 11.5%
4984882 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.74 56.0 5.68e-01 97.1% 81.4%
3841414 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.73 54.0 5.46e-01 92.9% 78.6%
4614716 4.1.1.292 beta barrels › SH3 › SH3 › SH3 › SH3_Rv2311 0.73 60.0 6.01e-01 90.0% 100.0%
3251940 4.1.1.51 beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.72 54.0 5.31e-01 95.7% 74.7%
3895159 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 56.0 6.02e-01 88.6% 98.3%
5067227 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 58.0 5.51e-01 94.3% 73.5%
3396896 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 58.0 5.67e-01 90.0% 81.3%
5001589 4.1.1.14 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L21e 0.72 58.0 5.11e-01 94.3% 61.0%
1545880 4.1.1.278 beta barrels › SH3 › SH3 › SH3 › SH3_YKFC_2nd 0.71 59.0 5.66e-01 94.3% 80.0%
3926175 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 53.0 5.02e-01 95.7% 65.9%
5039349 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 56.0 6.00e-01 88.6% 100.0%
3616622 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 57.0 5.98e-01 94.3% 96.8%
4168737 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 55.0 5.47e-01 97.1% 81.1%
4141828 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.70 55.0 5.45e-01 97.1% 81.1%
3879653 4.1.1.223 beta barrels › SH3 › SH3 › SH3 › KIF2A-like_1st 0.70 53.0 5.37e-01 94.3% 81.4%
146236 4.1.1.51 beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.69 54.0 4.66e-01 95.7% 54.6%
3484618 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.69 56.0 5.53e-01 95.7% 82.7%
4079197 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 49.0 4.67e-01 95.7% 64.7%
1503651 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.67 51.0 4.87e-01 94.3% 70.0%
3587555 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 57.0 5.71e-01 95.7% 92.9%
4559371 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 49.0 5.09e-01 97.1% 87.3%
3634475 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 57.0 5.77e-01 94.3% 97.1%
3557677 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.66 56.0 5.65e-01 95.7% 94.3%
490 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.66 50.0 5.00e-01 97.1% 79.7%
3230400 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 55.0 5.75e-01 94.3% 100.0%
4935547 4076.3.1.0 a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain 0.65 44.0 5.03e-01 92.9% 98.0%
3924038 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 57.0 5.59e-01 97.1% 92.0%
3281945 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.64 56.0 5.22e-01 100.0% 87.8%
3477037 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.64 55.0 5.58e-01 95.7% 95.7%
4400596 4.1.1.17 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.63 57.0 4.32e-01 100.0% 44.4%
3278555 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.63 42.0 3.39e-01 70.0% 80.7%
4087011 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.63 54.0 4.92e-01 97.1% 73.7%
5013823 4.1.1.30 beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.62 55.0 4.50e-01 100.0% 87.7%
3427504 4.1.1.150 beta barrels › SH3 › SH3 › SH3 › DUF3123 0.62 53.0 5.31e-01 92.9% 98.6%
3727542 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 45.0 4.24e-01 94.3% 62.2%
4547801 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.61 54.0 4.99e-01 100.0% 76.7%
3170723 220.1.1.95 beta barrels › PH domain-like › PH domain-like › PH domain-like › VID27_PH 0.61 47.0 4.11e-01 87.1% 85.2%
4024274 4.1.1.17 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.61 53.0 4.68e-01 98.6% 65.7%
4943298 264.2.1.1 beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain › Topoisom_bac 0.61 48.0 4.19e-01 85.7% 70.5%
3656401 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 53.0 5.17e-01 95.7% 89.3%
3623290 708.1.1.4 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.60 38.0 3.59e-01 85.7% 51.8%
3176702 219.1.1.115 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › AIM3_BBC1_C 0.59 50.0 3.96e-01 97.1% 51.0%
1807154 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.58 53.0 4.08e-01 100.0% 66.2%
3241890 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.58 46.0 4.09e-01 94.3% 61.0%
3224717 708.1.1.0 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain 0.57 41.0 3.45e-01 77.1% 92.5%
4309285 3844.2.1.2 a+b two layers › hydrogenase expression protein-like › MybT EspG5 chaperone › MybT EspG5 chaperone › DUF5081 0.57 52.0 3.77e-01 100.0% 38.9%
6883 223.5.1.1 a+b three layers › Profilin-like › YNR034W-A-like › YNR034W-A-like › YNR034W-A-like 0.56 47.0 4.27e-01 95.7% 95.9%
3278684 9.23.1.0 beta barrels › Lipocalins/Streptavidin › Hypothetical protein BT_0869 › Hypothetical protein BT_0869 0.56 42.0 3.65e-01 84.3% 88.3%
3215294 10.12.1.97 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › CNBH_CNNM2_C 0.55 48.0 3.63e-01 97.1% 45.5%
3269599 4.1.1.25 beta barrels › SH3 › SH3 › SH3 › PAZ 0.54 46.0 4.09e-01 94.3% 74.0%
3929996 10.12.1.97 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › CNBH_CNNM2_C 0.54 48.0 3.57e-01 98.6% 46.3%
4955635 375.1.1.63 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › LysW-like_globular 0.54 34.0 3.52e-01 77.1% 68.8%
4203300 222.1.1.0 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase 0.53 41.0 3.23e-01 85.7% 61.9%
3278010 222.1.1.12 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PS-DH 0.53 41.0 3.20e-01 85.7% 65.6%
3299766 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.52 38.0 2.99e-01 80.0% 64.2%
3021684 2.4.1.0 beta barrels › OB-fold › MOP-like › MOP-like 0.52 35.0 3.49e-01 70.0% 97.3%
3958252 10.12.1.0 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.52 40.0 3.30e-01 100.0% 44.8%