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OP328422.1__UXR29040.1__X__00067
Bact-VirOP328422.1__UXR29040.1__X__00067
Identity
- Accession:
- OP328422 ↗
- Kingdom:
- phage
Quality
81.8
mean pLDDT
Taxonomy
TaxID: 2983322
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 17-135
Domain cluster:
rep: NC_070786.1__YP_010652336.1__PP460_gp222__00022__D22-123
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF10651.16 best | BppU_N | 107.7 | 5.90e-31 | 100.0% | 81.9% |
D2
high
residues 267-348
Domain cluster:
representative
CATH (46)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1iwmA00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.68 | 48.0 | 3.69e-01 | 75.6% | 33.9% |
| 1cbiA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.68 | 53.0 | 4.52e-01 | 85.4% | 62.5% |
| 7szeB02 | 3.90.380.10 | Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 | 0.67 | 53.0 | 4.04e-01 | 84.1% | 56.0% |
| 6i8xA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.66 | 53.0 | 4.32e-01 | 85.4% | 61.1% |
| 2ffsA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.65 | 51.0 | 4.23e-01 | 84.1% | 60.0% |
| 3uaqB02 | 2.40.160.90 | Mainly Beta › Beta Barrel › Porin › | 0.64 | 47.0 | 3.79e-01 | 78.0% | 63.8% |
| 3stoA02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.63 | 45.0 | 3.71e-01 | 74.4% | 74.7% |
| 3pzfA01 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.63 | 49.0 | 3.80e-01 | 82.9% | 96.6% |
| 2a0aA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.63 | 50.0 | 4.34e-01 | 87.8% | 63.4% |
| 4exrA02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.61 | 41.0 | 4.33e-01 | 90.2% | 78.9% |
| 5t5lA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.61 | 50.0 | 3.65e-01 | 90.2% | 82.1% |
| 3ci0K01 | 3.30.1300.30 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like | 0.60 | 48.0 | 4.50e-01 | 89.0% | 83.7% |
| 2it9A00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.59 | 47.0 | 4.18e-01 | 86.6% | 60.0% |
| 4exrA01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 41.0 | 4.13e-01 | 85.4% | 74.1% |
| 2gc9B00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.59 | 47.0 | 3.83e-01 | 89.0% | 49.7% |
| 3oyyA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 41.0 | 4.41e-01 | 84.1% | 90.9% |
| 1ib8A02 | 2.30.30.180 | Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain | 0.58 | 40.0 | 4.29e-01 | 78.0% | 86.6% |
| 1o7dD01 | 2.70.98.30 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 | 0.58 | 49.0 | 3.43e-01 | 92.7% | 42.1% |
| 2cn2A02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.58 | 50.0 | 3.27e-01 | 100.0% | 51.2% |
| 5jozB02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 47.0 | 3.57e-01 | 90.2% | 78.9% |
| 1ospO01 | 2.40.128.160 | Mainly Beta › Beta Barrel › Lipocalin › C1 set domains (antibody constant domain-like) | 0.57 | 48.0 | 4.45e-01 | 92.7% | 76.2% |
| 4k35A02 | 2.70.98.30 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 | 0.57 | 50.0 | 3.76e-01 | 97.6% | 53.4% |
| 4jocA00 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.57 | 48.0 | 3.19e-01 | 95.1% | 82.6% |
| 1hlcA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 44.0 | 3.75e-01 | 81.7% | 82.2% |
| 7qrlA01 | 2.70.70.10 | Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) | 0.57 | 44.0 | 3.71e-01 | 82.9% | 74.8% |
| 1b9vA00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.56 | 49.0 | 3.20e-01 | 100.0% | 43.3% |
| 2vt8A00 | 3.40.1000.30 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › | 0.56 | 49.0 | 4.08e-01 | 97.6% | 69.2% |
| 6j8yC00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.56 | 44.0 | 3.14e-01 | 86.6% | 46.3% |
| 6fopA01 | 2.70.98.30 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 | 0.55 | 48.0 | 3.56e-01 | 100.0% | 52.2% |
| 3blcA00 | 2.70.98.90 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.55 | 46.0 | 3.21e-01 | 93.9% | 44.6% |
| 3t0pA02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.55 | 43.0 | 3.33e-01 | 86.6% | 57.0% |
| 4hbrA00 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 48.0 | 4.06e-01 | 100.0% | 72.1% |
| 5aa5E00 | 1.10.645.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome-c3 Hydrogenase; chain B › Cytochrome-c3 Hydrogenase, chain B | 0.54 | 42.0 | 2.58e-01 | 86.6% | 81.9% |
| 4u6bA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.54 | 48.0 | 3.16e-01 | 100.0% | 69.4% |
| 5nldB00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 41.0 | 3.48e-01 | 82.9% | 79.0% |
| 3c5mA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 46.0 | 3.03e-01 | 100.0% | 52.4% |
| 5upiA01 | 2.70.98.30 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 | 0.52 | 44.0 | 3.44e-01 | 95.1% | 55.3% |
| 3weoA01 | 2.60.40.1760 | Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) | 0.52 | 44.0 | 3.18e-01 | 96.3% | 52.1% |
| 1n7vA02 | 2.60.330.10 | Mainly Beta › Sandwich › receptor-binding protein prd1-p2, domain 2 › receptor-binding protein prd1-p2, domain 2 | 0.52 | 45.0 | 3.93e-01 | 96.3% | 79.7% |
| 1ux6A02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 43.0 | 3.34e-01 | 96.3% | 53.4% |
| 2z4hA01 | 2.40.128.300 | Mainly Beta › Beta Barrel › Lipocalin › NlpE, N-terminal domain | 0.51 | 35.0 | 3.64e-01 | 82.9% | 75.9% |
| 4l9cA00 | 3.40.1000.30 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › | 0.51 | 46.0 | 3.77e-01 | 100.0% | 60.0% |
| 2vf9A00 | 3.30.380.10 | Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein | 0.51 | 44.0 | 3.75e-01 | 93.9% | 93.9% |
| 2ml5A00 | 3.10.450.410 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 40.0 | 3.25e-01 | 85.4% | 72.9% |
| 6n44A00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 42.0 | 3.59e-01 | 100.0% | 54.7% |
| 3u1wA01 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 43.0 | 3.36e-01 | 96.3% | 45.9% |
ECOD (39)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4033743 | 243.19.1.0 ↗ | a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains | 0.88 | 82.0 | 8.11e-01 | 98.8% | 95.3% |
| 4031359 | 243.19.1.0 ↗ | a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains | 0.84 | 78.0 | 7.70e-01 | 100.0% | 96.5% |
| 3967853 | 243.19.1.0 ↗ | a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains | 0.80 | 73.0 | 6.46e-01 | 98.8% | 71.3% |
| 3974671 | 243.19.1.0 ↗ | a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains | 0.79 | 71.0 | 7.07e-01 | 96.3% | 94.1% |
| 4681650 | 71.1.1.3 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB | 0.76 | 52.0 | 3.98e-01 | 75.6% | 33.1% |
| 3228776 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.71 | 43.0 | 2.93e-01 | 74.4% | 16.9% |
| 3489068 | 719.1.1.5 ↗ | beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › PF27933 | 0.70 | 51.0 | 4.17e-01 | 75.6% | 98.6% |
| 2639646 | 331.3.1.19 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VanA_C | 0.70 | 54.0 | 4.08e-01 | 84.1% | 50.5% |
| 4046583 | 9.1.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin | 0.66 | 53.0 | 4.50e-01 | 85.4% | 63.1% |
| 3505038 | 220.1.1.159 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_met_RdRP | 0.65 | 47.0 | 3.67e-01 | 75.6% | 58.3% |
| 3690594 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.65 | 58.0 | 3.53e-01 | 100.0% | 37.0% |
| 4025256 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.64 | 45.0 | 4.59e-01 | 72.0% | 88.7% |
| 5036065 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.64 | 49.0 | 5.13e-01 | 81.7% | 100.0% |
| 3922884 | 5.1.4.271 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, PF30361 | 0.64 | 57.0 | 3.71e-01 | 100.0% | 51.9% |
| 4032161 | 809.1.1.0 ↗ | a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP | 0.64 | 40.0 | 4.39e-01 | 86.6% | 79.7% |
| 4927376 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.63 | 56.0 | 3.68e-01 | 97.6% | 61.2% |
| 3596663 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.63 | 53.0 | 3.64e-01 | 91.5% | 88.7% |
| 3167247 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.62 | 55.0 | 3.51e-01 | 96.3% | 37.1% |
| 136506 | 4075.1.1.2 ↗ | a+b complex topology › RGC domain › RGC domain › RGC domain › PF29130 | 0.61 | 43.0 | 4.07e-01 | 73.2% | 80.8% |
| 3968900 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.61 | 49.0 | 4.38e-01 | 89.0% | 90.0% |
| 3588252 | 6043.1.1.0 ↗ | a+b two layers › yfeY-like › yfeY-like › yfeY-like | 0.60 | 38.0 | 4.12e-01 | 86.6% | 80.0% |
| 4294796 | 9.1.1.14 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › CpeS | 0.60 | 50.0 | 3.86e-01 | 100.0% | 42.9% |
| 3781119 | 5.1.4.97 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Rrn6_beta-prop | 0.60 | 53.0 | 3.35e-01 | 100.0% | 57.0% |
| 5014687 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.60 | 42.0 | 4.57e-01 | 92.7% | 93.8% |
| 3273993 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.59 | 51.0 | 3.60e-01 | 95.1% | 38.4% |
| 3391005 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.58 | 52.0 | 3.45e-01 | 100.0% | 67.4% |
| 3219425 | 5.1.3.238 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › PF29568 | 0.57 | 49.0 | 4.28e-01 | 95.1% | 69.6% |
| 2702071 | 5.1.3.3 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Neur | 0.57 | 50.0 | 3.26e-01 | 100.0% | 39.5% |
| 4659430 | 12.3.1.24 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › YidC_periplas | 0.57 | 48.0 | 3.34e-01 | 95.1% | 43.2% |
| 3258731 | 241.15.1.2 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › PI31_Prot_N | 0.57 | 45.0 | 3.84e-01 | 87.8% | 80.0% |
| 4032029 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.56 | 45.0 | 4.32e-01 | 86.6% | 88.4% |
| 3242312 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.56 | 49.0 | 3.44e-01 | 100.0% | 61.0% |
| 4030616 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.56 | 48.0 | 3.78e-01 | 100.0% | 46.3% |
| 3891698 | 5.1.4.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH | 0.54 | 47.0 | 3.24e-01 | 96.3% | 45.5% |
| 3289896 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.54 | 45.0 | 2.64e-01 | 92.7% | 14.1% |
| 5060431 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.54 | 45.0 | 2.95e-01 | 93.9% | 30.5% |
| 5025094 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.53 | 43.0 | 3.88e-01 | 87.8% | 86.1% |
| 3903171 | 5.1.4.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH | 0.53 | 45.0 | 3.11e-01 | 96.3% | 44.5% |
| 3716707 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.52 | 41.0 | 3.24e-01 | 87.8% | 47.8% |
D3
high
residues 386-498
Domain cluster:
rep: MT880870.1__QPB07610.1__PLKLOBMN_00039__00039__D315-424