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OP329100.1__UXY92544.1__LUZ100_gp08__00007

Bact-Vir

OP329100.1__UXY92544.1__LUZ100_gp08__00007

Identity

Accession:
OP329100 ↗
Kingdom:
phage

Quality

87.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Autographivirales› Luzcentumvirus› Pseudomonas_phage_LUZ100

TaxID: 2973522

Cluster

View cluster (17 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-92
PDB
Domain cluster: rep: IMGVR_UViG_3300007985_000035-3300007985-Ga0100381_100056032__D2-93
CATH (22)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1zq1A01 2.30.30.520 Mainly Beta › Roll › SH3 type barrels. › 0.76 56.0 6.00e-01 86.7% 89.6%
4bi3A01 3.90.1720.80 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › 0.67 42.0 4.19e-01 86.7% 60.4%
5kcoA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.66 40.0 4.69e-01 80.0% 91.5%
4h75A00 2.80.10.70 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › Spindlin/Ssty 0.65 47.0 3.66e-01 86.7% 34.7%
2gfuA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.64 48.0 4.24e-01 88.9% 53.7%
2o07A01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.64 38.0 4.48e-01 76.7% 89.8%
3c6kA02 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.63 37.0 4.39e-01 73.3% 91.1%
2b2cA01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.59 38.0 4.30e-01 76.7% 90.6%
4qqgG00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.59 42.0 4.59e-01 85.6% 94.4%
2qi2A01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.58 49.0 4.68e-01 93.3% 78.8%
3stjA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.58 35.0 3.65e-01 80.0% 63.5%
3k2zA02 2.10.109.10 Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A 0.58 37.0 3.39e-01 86.7% 47.9%
1fouA02 2.40.500.10 Mainly Beta › Beta Barrel › Upper collar protein gp10 (connector protein) fold › Upper collar protein gp10 (connector protein) 0.55 44.0 3.89e-01 86.7% 74.2%
5hmaA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.55 42.0 4.04e-01 91.1% 71.2%
3k6yA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.53 41.0 3.96e-01 91.1% 71.0%
2hqvA00 3.40.1570.10 Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains 0.52 45.0 3.74e-01 100.0% 51.7%
4lduA03 2.30.30.1040 Mainly Beta › Roll › SH3 type barrels. › 0.52 37.0 4.17e-01 78.9% 100.0%
3bbaA00 3.90.70.50 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Streptopain (SpeB) 0.52 41.0 3.06e-01 86.7% 33.3%
2f4nB02 2.40.30.90 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacterial fluorinating enzyme like 0.52 40.0 3.95e-01 83.3% 97.9%
1ylnA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.51 42.0 3.94e-01 94.4% 87.7%
4ecnA01 2.60.40.3540 Mainly Beta › Sandwich › Immunoglobulin-like › Domain of unknown function DUF4458 0.50 41.0 3.95e-01 93.3% 76.7%
3gasB02 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.50 41.0 3.33e-01 87.8% 74.4%
ECOD (26)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3290160 4.1.1.323 ↗ beta barrels › SH3 › SH3 › SH3 › WYL 0.88 64.0 6.78e-01 85.6% 83.7%
4982354 4.7.1.0 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 0.84 57.0 6.69e-01 82.2% 96.9%
4118226 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.81 56.0 6.30e-01 86.7% 91.4%
4870495 304.169.1.1 ↗ a+b two layers › Alpha-beta plaits › RspWYL1 C-terminal domain › RspWYL1 C-terminal domain › WYL 0.81 61.0 5.72e-01 86.7% 65.7%
2866962 4.31.1.1 ↗ beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.80 61.0 5.68e-01 86.7% 65.7%
4071824 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.76 57.0 6.19e-01 86.7% 93.3%
4642857 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 59.0 6.26e-01 85.6% 97.5%
4152374 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 59.0 6.17e-01 86.7% 94.0%
4387099 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.73 59.0 6.27e-01 86.7% 97.5%
5053225 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 59.0 5.73e-01 86.7% 83.0%
4387111 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.72 59.0 6.27e-01 86.7% 100.0%
4422325 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 59.0 5.97e-01 86.7% 95.5%
4425420 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.72 59.0 6.05e-01 86.7% 92.9%
3587906 4.1.1.46 ↗ beta barrels › SH3 › SH3 › SH3 › VEG 0.65 50.0 5.26e-01 87.8% 93.8%
5024617 4.15.1.2 ↗ beta barrels › SH3 › TrmB C-terminal domain-like › TrmB C-terminal domain-like › PF31112 0.64 52.0 5.10e-01 86.7% 83.2%
2469820 219.1.1.49 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C70 0.62 50.0 4.19e-01 86.7% 53.2%
3339169 4.1.1.415 ↗ beta barrels › SH3 › SH3 › SH3 › PNPOx_N 0.58 44.0 4.53e-01 85.6% 87.1%
3487453 4.1.1.12 ↗ beta barrels › SH3 › SH3 › SH3 › PWWP 0.56 48.0 4.38e-01 96.7% 69.6%
4954568 219.1.1.165 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C71 0.56 38.0 3.34e-01 78.9% 47.7%
3702271 9.15.1.1 ↗ beta barrels › Lipocalins/Streptavidin › TLDC domain of oxidation resistance protein 2 › TLDC domain of oxidation resistance protein 2 › TLD 0.54 42.0 3.36e-01 86.7% 75.4%
3449628 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.52 43.0 4.00e-01 90.0% 70.4%
3377696 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.51 43.0 3.32e-01 92.2% 44.0%
4929497 1.1.5.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.51 38.0 3.48e-01 88.9% 60.0%
4319764 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.51 38.0 3.64e-01 87.8% 67.3%
4953373 1.1.5.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.50 40.0 3.53e-01 93.3% 57.9%
3280741 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.50 42.0 3.72e-01 94.4% 68.9%