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OP329100.1__UXY92584.1__LUZ100_gp48__00047

Bact-Vir

OP329100.1__UXY92584.1__LUZ100_gp48__00047

Identity

Accession:
OP329100 ↗
Kingdom:
phage

Quality

79.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Autographivirales› Luzcentumvirus› Pseudomonas_phage_LUZ100

TaxID: 2973522

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 408-483
PDB
Domain cluster: representative
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3ge2A00 2.40.128.50 Mainly Beta › Beta Barrel › Lipocalin › 0.67 47.0 4.48e-01 86.8% 62.9%
2w3xB00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.61 42.0 3.43e-01 72.4% 75.7%
5hx0A00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.60 53.0 3.45e-01 100.0% 49.0%
3er7B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 46.0 4.00e-01 85.5% 92.7%
1c8uA02 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.57 45.0 3.92e-01 84.2% 86.1%
1s4uX00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 48.0 3.15e-01 96.1% 28.4%
4ztkA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.56 47.0 3.38e-01 100.0% 71.3%
3cygA01 3.30.565.40 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Fervidobacterium nodosum Rt17-B1 like 0.55 44.0 3.85e-01 89.5% 92.4%
2wsuB02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 49.0 3.88e-01 100.0% 51.4%
1y7bA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.54 47.0 3.14e-01 100.0% 44.9%
4e72A01 3.30.565.40 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Fervidobacterium nodosum Rt17-B1 like 0.52 43.0 3.73e-01 92.1% 91.9%
2rkcA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.52 45.0 2.92e-01 100.0% 48.9%
4wyqB00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.52 40.0 4.09e-01 86.8% 85.3%
4ckmB00 2.170.210.20 Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › Spindle assembly abnormal protein 6, N-terminal domain 0.52 42.0 3.44e-01 90.8% 84.0%
3mx7A00 2.40.128.180 Mainly Beta › Beta Barrel › Lipocalin › 0.51 43.0 4.11e-01 93.4% 90.0%
4gn2A00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.51 45.0 3.16e-01 98.7% 68.3%
ECOD (17)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3974649 243.19.1.0 ↗ a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains 0.93 89.0 8.31e-01 100.0% 93.3%
3973700 243.19.1.0 ↗ a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains 0.84 76.0 6.97e-01 98.7% 76.8%
5020511 3338.2.1.0 ↗ a+b two layers › Fragilysin-3 prodomain-like › Type II secretion chaperone CpaB › Type II secretion chaperone CpaB 0.63 49.0 4.31e-01 89.5% 56.5%
3224154 5.1.4.304 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR11_2nd 0.60 54.0 3.51e-01 100.0% 58.8%
5038973 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.60 53.0 3.41e-01 100.0% 36.4%
3998279 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.59 52.0 4.64e-01 98.7% 76.4%
5033737 71.1.1.0 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.59 44.0 3.30e-01 80.3% 43.6%
3291057 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.58 46.0 4.75e-01 92.1% 94.3%
4012359 222.1.1.10 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT_3 0.57 45.0 3.70e-01 84.2% 76.3%
3188645 222.1.1.10 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT_3 0.56 44.0 3.80e-01 84.2% 97.5%
4106038 274.1.1.0 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.56 44.0 3.32e-01 85.5% 65.4%
3690138 222.1.1.10 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT_3 0.56 43.0 3.73e-01 82.9% 87.0%
3938509 5.1.4.304 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR11_2nd 0.54 48.0 3.18e-01 100.0% 42.8%
3991341 5.1.4.304 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR11_2nd 0.54 47.0 2.80e-01 100.0% 20.8%
3606892 218.1.1.0 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like 0.53 36.0 3.07e-01 71.1% 88.8%
4106397 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.53 36.0 3.67e-01 72.4% 85.3%
4029890 219.1.1.3 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.52 42.0 2.78e-01 88.2% 89.4%
D2 high residues 549-649
PDB
Domain cluster: rep: IMGVR_UViG_3300038974_000877-3300038974-Ga0416721_000556_7160_7909__D157-239
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF21882.3 best Gp53-like_C 59.4 5.60e-16 84.2% 97.6%
D3 medium residues 325-355
PDB