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OP341623.1__UYL93768.1__NIIg32_gp41__00041

Bact-Vir

OP341623.1__UYL93768.1__NIIg32_gp41__00041

Identity

Accession:
OP341623 ↗
Kingdom:
phage

Quality

94.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-51
PDB
CATH (49)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3x1oA00 1.20.120.1790 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.67 52.0 3.83e-01 90.0% 58.4%
1e7uA04 3.30.1010.10 Alpha Beta › 2-Layer Sandwich › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 4 › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 4 0.64 52.0 3.75e-01 96.0% 49.4%
1lxjA00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.63 47.0 3.86e-01 84.0% 63.1%
2ja9A02 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.63 43.0 3.64e-01 72.0% 65.5%
2x6hA02 3.30.1010.10 Alpha Beta › 2-Layer Sandwich › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 4 › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 4 0.63 51.0 3.70e-01 96.0% 49.7%
1vyiA00 1.20.120.820 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Phosphoprotein, C-terminal domain 0.62 42.0 3.27e-01 70.0% 65.8%
5nl9A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 48.0 4.13e-01 88.0% 61.9%
4bndA02 3.30.1240.20 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › Eukaryotic phosphomannomutase, cap domain 0.60 50.0 4.17e-01 100.0% 97.9%
4xpkA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.59 47.0 3.49e-01 92.0% 66.7%
1itpA00 3.30.70.80 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Peptidase S8 propeptide/proteinase inhibitor I9 0.58 45.0 4.00e-01 100.0% 58.4%
1s2oA02 3.90.1070.10 Alpha Beta › Alpha-Beta Complex › Hypothetical Protein Ta0175; Chain: A, domain 2 › 0.57 47.0 4.31e-01 98.0% 100.0%
2qk2A01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.57 39.0 2.54e-01 72.0% 35.9%
4dw8A02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.57 47.0 3.82e-01 100.0% 100.0%
2vqcA00 1.10.10.1470 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › F-112 protein-like 0.57 45.0 4.05e-01 88.0% 65.7%
1b7yB01 3.30.56.10 Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › 0.56 44.0 4.01e-01 98.0% 62.9%
3dnpA02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.56 46.0 3.66e-01 98.0% 100.0%
3pgvA02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.56 45.0 3.79e-01 100.0% 100.0%
4p72A04 3.30.56.10 Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › 0.56 42.0 3.82e-01 100.0% 59.2%
3l7wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 42.0 3.47e-01 90.0% 48.6%
3lmmB05 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 42.0 3.97e-01 84.0% 68.9%
2mh2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 42.0 3.92e-01 84.0% 87.5%
4zevA02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.55 47.0 3.74e-01 100.0% 100.0%
4y66F01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 42.0 3.85e-01 84.0% 84.8%
3ey7A01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.54 36.0 2.81e-01 86.0% 28.9%
2oh1C00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.54 44.0 3.18e-01 98.0% 44.2%
1dusA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 43.0 2.92e-01 90.0% 37.1%
3ez2A01 1.10.1660.30 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.54 37.0 3.29e-01 72.0% 57.1%
2f2eA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 38.0 3.21e-01 84.0% 42.9%
6juvB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 44.0 3.90e-01 92.0% 84.0%
5hmpB02 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.53 45.0 4.19e-01 98.0% 78.1%
4hkqA01 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.53 45.0 3.40e-01 100.0% 35.4%
1hkqA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 44.0 3.46e-01 98.0% 54.4%
5koxA02 3.30.70.2450 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 42.0 3.58e-01 90.0% 81.4%
1wi9A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 41.0 3.90e-01 84.0% 91.4%
4rs8A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 39.0 3.35e-01 82.0% 61.9%
2b30A02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.52 43.0 3.51e-01 100.0% 100.0%
2xzn800 3.30.63.20 Alpha Beta › 2-Layer Sandwich › Guanylate Kinase phosphate binding domain › 0.52 41.0 3.43e-01 88.0% 48.4%
1dctA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 43.0 3.03e-01 96.0% 85.0%
4asnA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 39.0 3.41e-01 90.0% 81.1%
1k78B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 41.0 3.34e-01 90.0% 77.5%
2dk8A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 38.0 3.66e-01 88.0% 76.9%
5bpdD01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 39.0 3.48e-01 84.0% 68.0%
1rkiA01 3.30.70.1650 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › PDO, CxxC motif 0.51 41.0 3.43e-01 96.0% 47.4%
2zq5A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 41.0 2.53e-01 98.0% 29.6%
1r1uB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 40.0 3.30e-01 84.0% 54.8%
4af3A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.51 44.0 3.70e-01 100.0% 61.4%
2wa0A01 1.10.10.1200 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › MAGE homology domain, winged helix WH1 motif 0.51 40.0 3.39e-01 98.0% 51.5%
2hf2B02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.51 41.0 3.38e-01 100.0% 99.1%
4aimA03 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.50 37.0 3.50e-01 100.0% 63.4%
ECOD (51)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3310307 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.72 54.0 4.49e-01 100.0% 45.6%
3479364 304.163.1.0 a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain 0.71 53.0 4.63e-01 100.0% 52.5%
3890741 320.1.1.7 a+b two layers › R3H domain-like › R3H domain › R3H domain › PUS7L_N 0.65 50.0 4.27e-01 100.0% 51.2%
3741254 101.1.2.289 alpha arrays › HTH › HTH › winged helix domain › Stb3 0.64 49.0 4.25e-01 90.0% 70.6%
4988554 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.64 47.0 4.39e-01 82.0% 87.7%
4137642 327.16.1.0 a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system 0.63 44.0 4.26e-01 100.0% 63.3%
3594156 304.8.1.49 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › R1_ABCA1 0.63 50.0 4.41e-01 100.0% 57.3%
3597641 304.163.1.0 a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain 0.63 50.0 4.43e-01 100.0% 60.0%
4932912 304.120.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI 0.62 48.0 4.47e-01 98.0% 66.2%
3715563 304.163.1.1 a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain › R1_ABCA1 0.61 46.0 4.22e-01 100.0% 60.0%
3928208 304.163.1.0 a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain 0.61 43.0 3.94e-01 100.0% 53.3%
3624653 304.163.1.1 a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain › R1_ABCA1 0.61 45.0 4.07e-01 100.0% 56.0%
3799886 304.8.1.49 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › R1_ABCA1 0.60 45.0 4.09e-01 84.0% 94.3%
3707815 101.1.10.0 alpha arrays › HTH › HTH › Cyclin-like 0.59 47.0 3.50e-01 86.0% 68.5%
4933273 101.1.2.55 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB 0.59 44.0 3.68e-01 82.0% 65.6%
3716821 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.57 49.0 4.23e-01 92.0% 92.0%
3408002 304.8.1.49 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › R1_ABCA1 0.57 46.0 3.80e-01 100.0% 49.1%
3961925 310.1.1.2 a+b two layers › RRF/tRNA synthetase additional domain-like › Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain › Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain › Arg_tRNA_synt_N 0.57 45.0 4.35e-01 100.0% 85.0%
3226058 304.8.1.54 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_13 0.57 43.0 3.94e-01 100.0% 60.0%
4265935 101.1.2.123 alpha arrays › HTH › HTH › winged helix domain › Paf67 0.57 44.0 3.76e-01 86.0% 89.4%
3398626 304.8.1.54 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_13 0.56 41.0 3.50e-01 82.0% 74.4%
3819120 101.1.2.120 alpha arrays › HTH › HTH › winged helix domain › DDRGK 0.56 43.0 3.41e-01 84.0% 50.5%
3588365 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.56 44.0 3.72e-01 86.0% 64.7%
3402256 304.8.1.49 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › R1_ABCA1 0.56 41.0 3.72e-01 100.0% 53.8%
3587571 101.1.2.93 alpha arrays › HTH › HTH › winged helix domain › HTH_Mga 0.56 43.0 3.91e-01 86.0% 82.9%
5011184 304.120.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI 0.56 41.0 3.93e-01 90.0% 66.2%
3935353 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 41.0 3.65e-01 88.0% 71.1%
5050881 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 44.0 3.50e-01 96.0% 41.7%
3397248 304.8.1.49 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › R1_ABCA1 0.55 48.0 3.93e-01 100.0% 64.2%
5032271 101.1.2.44 alpha arrays › HTH › HTH › winged helix domain › Ribosomal_S25 0.54 42.0 3.61e-01 84.0% 53.8%
5003991 328.1.1.0 a+b two layers › IF3-like › AlbA-like › AlbA-like 0.54 47.0 4.03e-01 100.0% 87.1%
4975002 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.54 43.0 3.91e-01 100.0% 62.5%
4981661 304.57.1.0 a+b two layers › Alpha-beta plaits › Rpp14/Pop5-like › Rpp14/Pop5-like 0.54 43.0 3.75e-01 100.0% 56.5%
None 0.54 40.0 2.98e-01 82.0% 36.3%
1884898 244.1.1.0 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.53 40.0 3.38e-01 88.0% 47.4%
4928824 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.53 45.0 3.74e-01 100.0% 53.7%
2618 101.1.2.16 alpha arrays › HTH › HTH › winged helix domain › Rep3_N 0.53 44.0 3.46e-01 98.0% 54.4%
4796697 101.1.2.55 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB 0.53 43.0 3.74e-01 92.0% 76.5%
5061511 101.1.2.89 alpha arrays › HTH › HTH › winged helix domain › HTH_DeoR 0.53 41.0 3.80e-01 86.0% 86.2%
3596115 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.53 41.0 3.12e-01 86.0% 68.0%
3699952 101.1.2.120 alpha arrays › HTH › HTH › winged helix domain › DDRGK 0.52 40.0 3.02e-01 84.0% 63.1%
4998548 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.52 43.0 4.09e-01 94.0% 78.3%
4029899 2003.1.5.6 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltr_RsmB-F 0.52 41.0 2.61e-01 98.0% 73.6%
3413344 304.48.1.4 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Guanylate_cyc 0.52 40.0 2.74e-01 100.0% 22.5%
4930880 328.1.1.0 a+b two layers › IF3-like › AlbA-like › AlbA-like 0.51 41.0 3.77e-01 96.0% 100.0%
4975589 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.51 40.0 3.58e-01 88.0% 74.7%
4950716 101.1.2.111 alpha arrays › HTH › HTH › winged helix domain › RQC 0.51 41.0 3.24e-01 88.0% 74.3%
3976914 101.1.2.6 alpha arrays › HTH › HTH › winged helix domain › GntR 0.51 42.0 3.76e-01 94.0% 65.7%
5057657 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.50 39.0 3.00e-01 82.0% 49.6%
3445234 2.9.1.0 beta barrels › OB-fold › RNB domain-like › RNB domain-like 0.50 37.0 2.32e-01 90.0% 13.7%
3957409 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.50 36.0 3.07e-01 84.0% 49.0%