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OP341626.1__UYL93966.1__PK35_gp24__00024
Bact-VirOP341626.1__UYL93966.1__PK35_gp24__00024
Identity
- Accession:
- OP341626 ↗
- Kingdom:
- phage
Quality
58.4
mean pLDDT
Taxonomy
TaxID: 2985564
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 38-95
Domain cluster:
representative
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1sumB01 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.74 | 62.0 | 5.05e-01 | 91.4% | 54.2% |
| 3r0qA02 | 2.70.160.11 | Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 | 0.73 | 62.0 | 4.28e-01 | 98.3% | 94.2% |
| 4kzsA02 | 6.10.140.1870 | Special › Helix non-globular › Helix Hairpins › | 0.72 | 48.0 | 4.54e-01 | 75.9% | 57.1% |
| 2e62A01 | 6.10.140.420 | Special › Helix non-globular › Helix Hairpins › | 0.71 | 53.0 | 5.60e-01 | 81.0% | 100.0% |
| 2fb5A01 | 1.10.287.770 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YojJ-like | 0.70 | 56.0 | 5.26e-01 | 87.9% | 72.2% |
| 1ma1A01 | 1.10.287.990 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain | 0.70 | 49.0 | 4.76e-01 | 74.1% | 67.2% |
| 5gm2K01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.69 | 47.0 | 3.17e-01 | 79.3% | 19.3% |
| 2db7A01 | 6.10.250.980 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.68 | 50.0 | 5.25e-01 | 82.8% | 86.8% |
| 1rq0A01 | 6.10.140.160 | Special › Helix non-globular › Helix Hairpins › | 0.68 | 55.0 | 4.94e-01 | 89.7% | 65.1% |
| 7ymiZ01 | 1.10.287.740 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Photosystem II PsbZ, reaction centre | 0.67 | 50.0 | 5.05e-01 | 81.0% | 100.0% |
| 2hh7A00 | 1.20.58.1000 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer | 0.66 | 53.0 | 4.73e-01 | 89.7% | 63.5% |
| 1zkeA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.66 | 55.0 | 4.89e-01 | 91.4% | 95.1% |
| 1zarA03 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.66 | 44.0 | 3.74e-01 | 77.6% | 41.2% |
| 3e22A03 | 1.10.287.600 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.63 | 52.0 | 5.37e-01 | 91.4% | 98.1% |
| 4ei7A02 | 3.40.50.1440 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tubulin/FtsZ, GTPase domain | 0.63 | 43.0 | 2.87e-01 | 72.4% | 19.2% |
| 1t11A02 | 1.10.3120.10 | Mainly Alpha › Orthogonal Bundle › Trigger factor, domain 2 › Trigger factor, C-terminal domain | 0.62 | 44.0 | 3.23e-01 | 75.9% | 26.5% |
| 4xaaA00 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.62 | 47.0 | 3.19e-01 | 82.8% | 31.2% |
| 8b6jF01 | 1.10.287.20 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Ubiquinol-cytochrome C reductase hinge domain | 0.62 | 46.0 | 4.48e-01 | 91.4% | 71.6% |
| 2gv9A05 | 1.10.287.690 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain | 0.60 | 47.0 | 4.73e-01 | 94.8% | 94.9% |
| 1e9fA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 49.0 | 3.48e-01 | 98.3% | 41.1% |
| 2ke4A00 | 6.10.140.470 | Special › Helix non-globular › Helix Hairpins › | 0.59 | 45.0 | 3.99e-01 | 91.4% | 58.2% |
| 4i1mB02 | 1.25.40.830 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.58 | 39.0 | 2.96e-01 | 74.1% | 27.9% |
| 1rp3A01 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.53 | 38.0 | 3.47e-01 | 98.3% | 54.1% |
ECOD (30)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3188573 | 5010.1.1.0 ↗ | extended segments › Bacterial aa3 type cytochrome c oxidase subunit IV › Bacterial aa3 type cytochrome c oxidase subunit IV › Bacterial aa3 type cytochrome c oxidase subunit IV | 0.78 | 64.0 | 6.42e-01 | 91.4% | 88.3% |
| 1019364 | 604.5.1.2 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › PhoU | 0.74 | 62.0 | 4.99e-01 | 91.4% | 52.3% |
| 3171139 | 7022.1.1.1 ↗ | alpha bundles › central core domain of D-alanyl transfer protein › central core domain of D-alanyl transfer protein › central core domain of D-alanyl transfer protein › MBOAT | 0.73 | 63.0 | 4.46e-01 | 100.0% | 61.6% |
| 3510564 | 1128.1.1.0 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein | 0.72 | 52.0 | 4.33e-01 | 89.7% | 43.7% |
| 3420489 | 148.1.1.0 ↗ | alpha arrays › Histone-like › Histone-related › Histone | 0.72 | 53.0 | 4.95e-01 | 77.6% | 64.3% |
| 3900975 | 604.1.1.92 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › SR_desmoplakin_3 | 0.71 | 59.0 | 4.53e-01 | 91.4% | 52.3% |
| 3855782 | 604.1.1.92 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › SR_desmoplakin_3 | 0.71 | 59.0 | 4.70e-01 | 93.1% | 56.7% |
| 4080125 | 616.1.1.45 ↗ | alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › MIS13 | 0.70 | 58.0 | 5.24e-01 | 100.0% | 66.3% |
| 3539738 | 10.12.1.1 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding | 0.70 | 55.0 | 3.79e-01 | 89.7% | 23.6% |
| 3512559 | 192.1.1.37 ↗ | alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain › DUF7753 | 0.70 | 52.0 | 5.05e-01 | 79.3% | 75.4% |
| 4927007 | 605.1.1.2 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › H-kinase_dim | 0.70 | 52.0 | 5.37e-01 | 81.0% | 92.7% |
| 3491310 | 3826.1.1.67 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Med10 | 0.70 | 56.0 | 5.15e-01 | 87.9% | 70.7% |
| 4553862 | 4146.1.1.0 ↗ | alpha bundles › YqgQ-like › YqgQ-like › YqgQ-like | 0.69 | 50.0 | 5.58e-01 | 79.3% | 100.0% |
| 3415522 | 4082.1.1.1 ↗ | alpha duplicates or obligate multimers › Hairy Orange domain › Hairy Orange domain › Hairy Orange domain › Hairy_orange | 0.68 | 54.0 | 5.26e-01 | 91.4% | 78.5% |
| 3225628 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.68 | 53.0 | 3.53e-01 | 89.7% | 22.7% |
| 3732977 | 2486.1.1.3 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Carboxyl_trans | 0.67 | 57.0 | 3.32e-01 | 96.6% | 15.0% |
| 4959116 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.66 | 53.0 | 3.70e-01 | 91.4% | 27.8% |
| 3686904 | 2486.1.1.3 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Carboxyl_trans | 0.65 | 53.0 | 3.80e-01 | 96.6% | 43.6% |
| 3399433 | 3826.1.1.39 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › WHEP-TRS | 0.65 | 50.0 | 4.83e-01 | 87.9% | 78.6% |
| 4610257 | 6130.1.1.0 ↗ | alpha complex topology › Selenocysteine synthase N-terminal domain › Selenocysteine synthase N-terminal domain › Selenocysteine synthase N-terminal domain | 0.65 | 44.0 | 4.26e-01 | 74.1% | 63.1% |
| 4444553 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.64 | 51.0 | 3.15e-01 | 86.2% | 16.3% |
| 4026983 | 604.1.1.135 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › DUF155 | 0.64 | 51.0 | 3.47e-01 | 87.9% | 24.5% |
| 3807996 | 616.1.1.0 ↗ | alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain | 0.64 | 46.0 | 4.53e-01 | 79.3% | 70.8% |
| 3933048 | 4992.1.1.12 ↗ | extended segments › RelB-like › RelB-like › RelB-like › LIN9_C | 0.64 | 52.0 | 4.36e-01 | 89.7% | 55.0% |
| 3925160 | 9.26.1.0 ↗ | beta barrels › Lipocalins/Streptavidin | 0.63 | 54.0 | 3.84e-01 | 100.0% | 43.2% |
| 5069130 | 6026.1.1.0 ↗ | alpha duplicates or obligate multimers › cwf21 domain › cwf21 domain › cwf21 domain | 0.63 | 48.0 | 5.14e-01 | 96.6% | 96.0% |
| 3520738 | 4106.1.1.1 ↗ | few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC | 0.62 | 51.0 | 3.74e-01 | 91.4% | 33.5% |
| 3218643 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.61 | 50.0 | 4.13e-01 | 91.4% | 50.5% |
| 3989094 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.60 | 47.0 | 4.49e-01 | 91.4% | 77.1% |
| 4942772 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.59 | 47.0 | 4.58e-01 | 91.4% | 83.1% |