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WPH65868.1

Arc-Vir

OP374082__WPH65868.1__HJTV4-gp45__00044

Identity

Accession:
OP374082 ↗
Protein ID:
WPH65868.1 ↗
Kingdom:
archaea

Quality

86.8 mean pLDDT

Taxonomy

Haloarchaeal_virus_HJTV-4

TaxID: 3075134

Cluster

View cluster (14 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 11-152
PDB
Domain cluster: rep: IMGVR_UViG_7000000171_000112-7000000171-SRS052697_LANL_scaffold_75554__gene_171382__D9-163
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF13274.12 best SocA_Panacea 53.3 7.80e-14 72.5% 95.6%
CATH (21)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2f2eA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 42.0 5.26e-01 72.5% 87.9%
8agaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 42.0 4.46e-01 71.1% 65.1%
3zcoA00 1.10.10.2450 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.71 50.0 5.30e-01 72.5% 92.1%
7jgsG02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 47.0 5.56e-01 73.9% 100.0%
3elkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 44.0 5.15e-01 100.0% 94.3%
2xmjA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.63 29.0 4.15e-01 76.8% 95.2%
1vt0k00 1.10.3230.20 Mainly Alpha › Orthogonal Bundle › Hypothetical protein yqbg › P22 tail accessory factor (Gp4) 0.60 37.0 3.75e-01 79.6% 59.3%
2nnnC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 43.0 4.49e-01 99.3% 78.0%
7uvpA02 3.30.70.870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 0.60 29.0 3.96e-01 79.6% 92.8%
2dy1A03 3.30.70.870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 0.60 30.0 3.90e-01 80.3% 88.2%
1lj9B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 46.0 4.69e-01 95.1% 81.7%
3cjnA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 44.0 4.39e-01 87.3% 75.3%
5eriA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 46.0 4.49e-01 95.1% 75.8%
5e1wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 45.0 4.21e-01 92.3% 67.9%
4g9yA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 43.0 4.41e-01 98.6% 80.1%
2rdpA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 42.0 4.25e-01 78.2% 75.7%
2e9hA01 3.30.30.170 Alpha Beta › 2-Layer Sandwich › Defensin A-like › 0.55 31.0 3.40e-01 83.1% 67.3%
2kjwA00 3.30.70.60 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B 0.54 28.0 3.31e-01 90.1% 70.8%
7dvrA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 42.0 4.24e-01 100.0% 81.6%
4mtnA01 3.30.1480.10 Alpha Beta › 2-Layer Sandwich › N Utilization Substance Protein A; Chain:P; domain 4 › NusA, N-terminal domain 0.52 34.0 4.04e-01 84.5% 100.0%
4ecfA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.51 39.0 3.95e-01 85.2% 83.3%
ECOD (55)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4940657 101.1.2.269 ↗ alpha arrays › HTH › HTH › winged helix domain › SocA_Panacea 0.90 86.0 8.14e-01 100.0% 89.0%
4998602 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.85 77.0 6.70e-01 95.1% 74.1%
4996617 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.85 75.0 7.88e-01 97.9% 100.0%
5045862 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.84 73.0 7.63e-01 90.1% 100.0%
4943285 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.83 76.0 7.79e-01 94.4% 100.0%
5064968 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.83 73.0 7.68e-01 92.3% 100.0%
4998735 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.83 73.0 7.54e-01 92.3% 98.5%
5065568 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.82 72.0 7.53e-01 96.5% 100.0%
3964088 101.1.2.269 ↗ alpha arrays › HTH › HTH › winged helix domain › SocA_Panacea 0.82 78.0 7.08e-01 100.0% 85.0%
5081553 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.82 73.0 6.87e-01 93.0% 100.0%
5054757 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.82 68.0 7.25e-01 97.2% 99.2%
4973586 101.1.2.269 ↗ alpha arrays › HTH › HTH › winged helix domain › SocA_Panacea 0.81 74.0 6.90e-01 95.1% 87.1%
5003912 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.81 63.0 6.09e-01 81.0% 93.1%
5005264 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.81 72.0 6.84e-01 94.4% 87.3%
4945179 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.80 70.0 6.97e-01 92.3% 91.0%
5019931 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.79 71.0 7.03e-01 95.8% 89.3%
4969597 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.79 70.0 6.96e-01 93.0% 95.2%
5011607 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.79 70.0 7.05e-01 92.3% 95.0%
3602284 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.78 37.0 4.75e-01 70.4% 76.5%
4955510 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.77 69.0 6.79e-01 93.7% 94.0%
4968451 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.76 66.0 6.87e-01 92.3% 99.2%
4987371 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.72 55.0 6.01e-01 78.9% 100.0%
4982781 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.70 47.0 5.30e-01 71.8% 88.2%
5006976 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.69 62.0 5.84e-01 94.4% 86.6%
4358890 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.69 49.0 5.44e-01 77.5% 91.3%
3875839 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.68 48.0 5.27e-01 77.5% 88.7%
3577575 101.1.2.22 ↗ alpha arrays › HTH › HTH › winged helix domain › PCI 0.68 36.0 4.68e-01 71.8% 91.3%
3642800 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.67 49.0 5.45e-01 78.2% 93.9%
3616235 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.67 36.0 4.59e-01 72.5% 91.3%
4203701 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.66 48.0 5.02e-01 77.5% 81.4%
5076041 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.66 41.0 4.42e-01 80.3% 73.3%
4947811 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.65 41.0 4.61e-01 81.0% 79.1%
5027116 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.65 45.0 4.96e-01 71.8% 87.8%
5033207 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.64 46.0 4.86e-01 73.2% 90.4%
5076211 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.63 40.0 4.58e-01 80.3% 83.6%
5082051 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.62 37.0 4.54e-01 71.1% 93.3%
4951142 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.61 37.0 3.91e-01 72.5% 65.4%
4649222 101.1.2.15 ↗ alpha arrays › HTH › HTH › winged helix domain › MarR 0.61 44.0 4.60e-01 89.4% 80.0%
3562051 101.1.2.29 ↗ alpha arrays › HTH › HTH › winged helix domain › PTS_2-RNA 0.61 36.0 4.10e-01 74.6% 78.1%
4410880 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.61 45.0 4.38e-01 76.1% 85.2%
1291586 101.1.2.135 ↗ alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.61 45.0 4.64e-01 90.8% 79.1%
5047445 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.60 40.0 4.38e-01 81.7% 80.0%
4527859 304.28.1.0 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain 0.60 31.0 3.94e-01 81.0% 85.0%
5056954 305.1.1.0 ↗ a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase 0.60 28.0 3.80e-01 80.3% 84.0%
5029321 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.60 41.0 3.88e-01 71.1% 65.9%
167429 101.1.2.15 ↗ alpha arrays › HTH › HTH › winged helix domain › MarR 0.59 44.0 4.39e-01 87.3% 75.3%
3971712 101.1.2.135 ↗ alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.58 41.0 4.35e-01 99.3% 79.2%
3311237 304.52.1.1 ↗ a+b two layers › Alpha-beta plaits › YbeD/HP0495-like › YbeD/HP0495-like › DUF493 0.58 32.0 3.89e-01 80.3% 84.4%
3954543 101.1.2.135 ↗ alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.57 47.0 4.72e-01 93.7% 85.3%
3832146 304.8.1.68 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › DUF493 0.56 32.0 3.72e-01 80.3% 80.0%
3426926 304.120.1.0 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI 0.52 29.0 3.52e-01 79.6% 87.1%
4136209 304.28.1.0 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain 0.51 24.0 2.95e-01 88.0% 68.2%
3030453 304.9.1.22 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › ACT_4 0.51 27.0 3.38e-01 80.3% 89.9%
3545474 327.11.2.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.50 29.0 3.51e-01 80.3% 88.9%
3795358 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.50 26.0 3.30e-01 78.2% 89.3%
D2 medium residues 159-187
PDB