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OP380492.1__UXR28949.1__X__00218

Bact-Vir

OP380492.1__UXR28949.1__X__00218

Identity

Accession:
OP380492 ↗
Kingdom:
phage

Quality

86.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Herelleviridae› Bacillus_phage_Nachito

TaxID: 2982875

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-67
PDB
Domain cluster: representative
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1z1bA01 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.71 28.0 3.10e-01 85.1% 42.1%
4mb7A02 1.10.8.50 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.65 38.0 2.96e-01 85.1% 26.5%
1yzyA02 3.40.980.20 Alpha Beta › 3-Layer(aba) Sandwich › Molybdenum Cofactor Biosythetic Enzyme; Chain A › Four-carbon acid sugar kinase, nucleotide binding domain 0.60 46.0 3.38e-01 82.1% 47.2%
2fgtA03 3.30.310.160 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › YycH protein, domain 2 0.59 41.0 3.30e-01 74.6% 63.7%
2bzyA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.58 34.0 3.56e-01 73.1% 62.9%
4hdoA03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 39.0 3.52e-01 70.1% 69.6%
5wceA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.57 40.0 3.28e-01 74.6% 70.5%
3rgfA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.55 38.0 3.42e-01 71.6% 99.0%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3786196 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 45.0 3.06e-01 91.0% 20.5%
4963580 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.66 42.0 4.00e-01 70.1% 53.8%
4202852 375.1.1.26 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 0.58 51.0 4.35e-01 95.5% 94.3%
3877938 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.54 39.0 3.56e-01 77.6% 91.1%
5078178 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.53 36.0 3.49e-01 70.1% 62.7%
3911238 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.52 37.0 3.46e-01 76.1% 90.6%