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OP380595.1__UYD57643.1__MEIMHGIN_00001__00001

Bact-Vir

OP380595.1__UYD57643.1__MEIMHGIN_00001__00001

Identity

Accession:
OP380595 ↗
Kingdom:
phage

Quality

77.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 15-61
PDB
Domain cluster: representative
CATH (47)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1mpgA01 3.30.310.20 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › DNA-3-methyladenine glycosylase AlkA, N-terminal domain 0.70 53.0 4.01e-01 83.0% 40.2%
5z5dA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.69 53.0 3.51e-01 87.2% 22.1%
5zbeA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.67 48.0 3.76e-01 78.7% 84.1%
2nvmA00 3.30.310.110 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like 0.63 51.0 4.09e-01 95.7% 49.0%
3tzgA00 2.40.160.150 Mainly Beta › Beta Barrel › Porin › 0.63 53.0 3.44e-01 100.0% 20.5%
3k44B00 3.30.2450.30 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.61 53.0 3.78e-01 100.0% 61.4%
4nkbA01 3.30.1120.120 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.61 49.0 3.82e-01 100.0% 39.5%
1vr8A00 3.40.1000.20 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › TM1622-like 0.61 46.0 3.52e-01 100.0% 31.9%
3lm3A02 3.30.1120.110 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.61 49.0 3.96e-01 100.0% 77.6%
2jhnA01 3.30.310.20 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › DNA-3-methyladenine glycosylase AlkA, N-terminal domain 0.60 44.0 3.39e-01 80.9% 35.4%
4ktpB02 2.60.420.10 Mainly Beta › Sandwich › Maltose phosphorylase, domain 3 › Maltose phosphorylase, domain 3 0.60 48.0 4.12e-01 95.7% 92.7%
1p5tA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 50.0 3.95e-01 100.0% 68.9%
1npeA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.59 52.0 3.24e-01 100.0% 28.9%
4akmB00 2.40.160.110 Mainly Beta › Beta Barrel › Porin › 0.59 48.0 3.48e-01 100.0% 33.8%
3w9kA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.59 46.0 3.47e-01 91.5% 33.3%
1cgtA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.58 46.0 3.77e-01 91.5% 90.4%
3hfqA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 49.0 2.94e-01 100.0% 24.1%
3cm1A00 2.30.31.20 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Sporulation-specific cell division protein SsgB 0.57 45.0 3.34e-01 100.0% 30.9%
5amhA00 2.170.150.20 Mainly Beta › Beta Complex › Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A › Peptide methionine sulfoxide reductase. 0.57 45.0 3.62e-01 93.6% 48.1%
3d2fA03 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.57 44.0 3.61e-01 87.2% 59.1%
4r8oA00 2.40.128.720 Mainly Beta › Beta Barrel › Lipocalin › 0.56 44.0 3.71e-01 100.0% 64.3%
2kc8A00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.56 41.0 3.40e-01 83.0% 41.1%
1y7bA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.56 46.0 3.11e-01 100.0% 38.8%
3ge2A00 2.40.128.50 Mainly Beta › Beta Barrel › Lipocalin › 0.56 39.0 3.34e-01 87.2% 41.6%
1e5tA02 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.55 46.0 2.80e-01 100.0% 24.1%
2durB01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 42.0 2.84e-01 93.6% 80.8%
3q0xA01 2.170.210.20 Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › Spindle assembly abnormal protein 6, N-terminal domain 0.55 44.0 3.24e-01 100.0% 85.2%
2w38A01 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.55 46.0 2.84e-01 100.0% 28.9%
1lfoA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.55 39.0 3.01e-01 91.5% 29.9%
3hjhA02 3.30.2060.10 Alpha Beta › 2-Layer Sandwich › Penicillin-binding protein 1b fold › Penicillin-binding protein 1b domain 0.54 45.0 3.74e-01 100.0% 52.3%
5kkuD00 3.10.129.110 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase 0.53 40.0 2.59e-01 89.4% 82.7%
1nkgA01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.53 44.0 2.91e-01 100.0% 64.9%
3omzA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 38.0 3.02e-01 76.6% 78.6%
1s4uX00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 44.0 2.70e-01 100.0% 21.9%
2eqmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.53 36.0 3.56e-01 74.5% 79.2%
1p32B00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.53 45.0 3.11e-01 100.0% 29.2%
4l9cA00 3.40.1000.30 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › 0.52 38.0 2.98e-01 93.6% 74.7%
3bn0A00 3.30.1320.10 Alpha Beta › 2-Layer Sandwich › S16 Ribosomal Protein; Chain: A; › Ribosomal protein S16 0.52 39.0 3.22e-01 85.1% 45.3%
1xkpC00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.52 42.0 3.26e-01 100.0% 71.4%
3zx7A02 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.52 42.0 3.19e-01 100.0% 86.9%
1dp4C02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.52 43.0 2.95e-01 100.0% 33.8%
8hpoK01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 41.0 2.49e-01 100.0% 22.4%
1u7bA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.52 38.0 2.58e-01 91.5% 89.6%
2pmeA01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.51 40.0 2.60e-01 100.0% 36.2%
2bs6A01 2.40.128.190 Mainly Beta › Beta Barrel › Lipocalin › 0.51 40.0 3.55e-01 100.0% 91.7%
1lkeA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.51 42.0 3.02e-01 100.0% 31.8%
3jclA01 2.60.120.960 Mainly Beta › Sandwich › Jelly Rolls › Spike glycoprotein, N-terminal domain 0.51 41.0 2.62e-01 100.0% 36.2%
ECOD (65)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4960423 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.69 54.0 3.23e-01 85.1% 11.9%
3479960 5.1.4.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH 0.68 51.0 3.06e-01 80.9% 15.7%
5014686 809.2.1.0 a+b two layers › BLIP-like › BT0923-like › BT0923-like 0.68 51.0 4.83e-01 80.9% 70.9%
3577497 389.1.1.17 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › FXa_inhibition 0.68 50.0 3.61e-01 80.9% 29.3%
4136892 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.67 51.0 4.30e-01 83.0% 53.8%
4937627 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.66 54.0 4.36e-01 100.0% 47.8%
4436049 1190.1.1.1 a+b two layers › Curli production assembly/transport component CsgF › Curli production assembly/transport component CsgF › Curli production assembly/transport component CsgF › CsgF 0.66 49.0 3.86e-01 87.2% 38.0%
5032559 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.66 57.0 4.65e-01 100.0% 52.2%
4002261 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.66 54.0 3.04e-01 91.5% 80.0%
3433124 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.64 57.0 3.33e-01 100.0% 22.9%
3641797 5.3.1.0 beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II 0.64 50.0 4.34e-01 91.5% 60.0%
3466402 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.64 47.0 3.04e-01 80.9% 17.4%
5014009 11.1.1.53 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DOMON 0.64 48.0 3.27e-01 80.9% 64.4%
3233005 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.64 46.0 2.95e-01 100.0% 14.5%
5011728 4210.1.1.0 a+b two layers › WGR domain › WGR domain › WGR domain 0.63 48.0 3.89e-01 85.1% 48.4%
5051538 298.1.1.8 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C 0.63 49.0 3.10e-01 91.5% 14.9%
5022612 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.62 47.0 3.01e-01 87.2% 95.7%
3227515 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.62 51.0 3.85e-01 100.0% 38.0%
3186839 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.61 45.0 2.69e-01 80.9% 15.4%
3251953 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.61 46.0 4.69e-01 85.1% 95.6%
4941375 3772.1.1.0 beta sandwiches › Putative anti-sigma factor BDI_1681 N-terminal domain › Putative anti-sigma factor BDI_1681 N-terminal domain › Putative anti-sigma factor BDI_1681 N-terminal domain 0.61 52.0 3.54e-01 95.7% 35.8%
3953943 9.27.1.1 beta barrels › Lipocalins/Streptavidin › LpqH › LpqH › Myco_19_kDa 0.61 53.0 4.08e-01 100.0% 43.6%
3827726 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.61 45.0 2.84e-01 85.1% 16.6%
3826655 5.1.3.67 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.61 43.0 2.64e-01 78.7% 12.4%
3262392 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.60 50.0 3.06e-01 95.7% 28.2%
5033616 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.60 49.0 3.21e-01 100.0% 95.3%
5036656 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.60 41.0 3.86e-01 72.3% 56.7%
3801015 5.1.4.94 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Det1 0.60 45.0 2.63e-01 100.0% 8.7%
3716012 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.60 47.0 2.83e-01 87.2% 11.3%
5022797 12.6.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycoside hydrolase family 127 middle domain-related › Glycoside hydrolase family 127 middle domain-related 0.59 49.0 3.24e-01 100.0% 23.7%
3238997 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.58 47.0 3.57e-01 100.0% 36.8%
3574041 5.1.13.2 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › Propeller domain of DCAF15 › Det1 0.58 42.0 2.51e-01 95.7% 8.6%
5014685 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.57 44.0 4.00e-01 95.7% 61.5%
3588455 274.1.1.0 a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.57 42.0 3.72e-01 91.5% 54.3%
3953302 331.2.1.1 a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV 0.56 48.0 3.79e-01 97.9% 56.7%
3903552 5.1.4.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH 0.56 42.0 2.55e-01 85.1% 11.1%
4400911 12.1.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.56 43.0 4.55e-01 91.5% 100.0%
3931222 5.1.4.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH 0.56 41.0 2.59e-01 85.1% 13.0%
3926459 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 43.0 3.58e-01 97.9% 80.0%
5041294 5.1.4.665 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › FG-GAP_2 0.56 44.0 2.83e-01 100.0% 40.7%
3435547 5.3.1.0 beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II 0.56 41.0 3.21e-01 85.1% 39.2%
3484246 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.56 48.0 2.89e-01 100.0% 18.4%
5014619 4312.1.1.3 a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.56 41.0 3.56e-01 85.1% 47.5%
3802590 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.56 48.0 2.92e-01 100.0% 26.2%
4453958 274.1.1.23 a+b two layers › Pili subunits › Pili subunits › Pili subunits › DUF5374 0.55 36.0 3.42e-01 85.1% 51.7%
3806012 5.1.3.67 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.55 48.0 2.90e-01 100.0% 24.6%
3460207 5.1.3.67 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.55 44.0 2.82e-01 95.7% 55.2%
3991137 5.1.4.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH 0.54 42.0 2.63e-01 95.7% 22.6%
3295272 387.1.3.0 few secondary structure elements › omega toxin-like › omega toxin-related › Colipase-like 0.54 43.0 4.40e-01 95.7% 97.8%
3441723 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.54 40.0 2.53e-01 85.1% 14.1%
3608706 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.53 44.0 2.70e-01 100.0% 24.3%
5063704 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.53 39.0 3.60e-01 91.5% 58.5%
3403871 2007.1.2.4 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor 0.53 41.0 2.90e-01 100.0% 32.7%
3612239 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.52 41.0 2.63e-01 100.0% 26.8%
5062732 4312.1.1.0 a+b two layers › RelE-like › RelE-like › RelE-like 0.52 39.0 3.35e-01 85.1% 50.6%
3516546 2007.1.2.4 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor 0.52 40.0 2.87e-01 100.0% 50.5%
4998404 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.52 35.0 3.31e-01 85.1% 55.0%
3291828 5.1.4.14 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Peptidase_S9_N 0.52 41.0 2.55e-01 100.0% 31.5%
3524397 2007.1.2.4 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor 0.52 40.0 2.79e-01 100.0% 48.1%
3856372 2007.1.2.4 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor 0.52 42.0 2.96e-01 100.0% 37.4%
5012403 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 37.0 2.67e-01 80.9% 26.7%
3675561 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.51 39.0 2.55e-01 97.9% 98.0%
3287203 319.1.1.16 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › PF26059 0.51 39.0 3.44e-01 93.6% 100.0%
5079259 2004.1.1.308 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_21 0.50 40.0 2.48e-01 93.6% 14.5%
3957060 325.1.6.2 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 0.50 42.0 3.09e-01 100.0% 51.0%
D2 high residues 199-268
PDB