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OP380596.1__UYD58065.1__GHHBBDOD_00210__00194
Bact-VirOP380596.1__UYD58065.1__GHHBBDOD_00210__00194
Identity
- Accession:
- OP380596 ↗
- Kingdom:
- phage
Quality
82.8
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Tulanevirus›
Aeromonas_phage_avDM4
TaxID: 3101597
Cluster
View cluster (9 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-96
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF25693.2 best | Phage_Y01A | 44.8 | 2.30e-11 | 99.0% | 96.7% |
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3aqoA01 | 3.30.70.3400 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.68 | 34.0 | 3.66e-01 | 90.5% | 56.2% |
| 4oi3A00 | 3.30.70.3090 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ORF SCO4226, nickel-binding ferredoxin-like monomer | 0.67 | 33.0 | 3.53e-01 | 92.6% | 53.1% |
| 3znuA00 | 3.30.70.1060 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel | 0.65 | 33.0 | 3.38e-01 | 85.3% | 50.0% |
| 1p65A00 | 6.10.140.90 | Special › Helix non-globular › Helix Hairpins › | 0.58 | 26.0 | 3.31e-01 | 71.6% | 70.2% |
| 6l3tA01 | 1.20.1440.80 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Gap junction channel protein cysteine-rich domain | 0.57 | 49.0 | 3.89e-01 | 95.8% | 81.9% |
| 1t6aA02 | 3.30.310.120 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Rbstp2229 like protein | 0.57 | 31.0 | 3.40e-01 | 76.8% | 65.4% |
| 4gr5C01 | 3.90.820.10 | Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id | 0.54 | 31.0 | 3.71e-01 | 85.3% | 84.4% |
| 1nd7A01 | 3.90.1750.10 | Alpha Beta › Alpha-Beta Complex › Hect, E3 ligase catalytic domain fold › Hect, E3 ligase catalytic domains | 0.52 | 40.0 | 3.27e-01 | 83.2% | 58.6% |
| 1in0A01 | 3.30.70.860 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 36.0 | 4.09e-01 | 98.9% | 100.0% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4242475 | 304.28.1.4 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › SecD_1st | 0.64 | 33.0 | 3.59e-01 | 91.6% | 58.7% |
| 4662505 | 304.28.1.4 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › SecD_1st | 0.62 | 33.0 | 3.55e-01 | 90.5% | 58.8% |
| 4234725 | 304.28.1.4 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › SecD_1st | 0.59 | 34.0 | 3.48e-01 | 92.6% | 56.8% |
| 4044667 | 4076.2.1.2 ↗ | a+b two layers › L9 N-domain-like › MbtH-like › MbtH-like › PF27096 | 0.58 | 37.0 | 4.20e-01 | 87.4% | 82.7% |
| 3725600 | 304.3.1.1 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA | 0.58 | 26.0 | 3.06e-01 | 90.5% | 53.8% |
| 3189419 | 267.1.1.0 ↗ | a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain | 0.55 | 40.0 | 2.90e-01 | 76.8% | 82.1% |
| 4603329 | 101.1.2.108 ↗ | alpha arrays › HTH › HTH › winged helix domain › PuR_N | 0.55 | 32.0 | 3.49e-01 | 81.1% | 68.8% |
| 3741391 | 11.1.1.471 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Kre9_KNH | 0.54 | 31.0 | 3.24e-01 | 100.0% | 57.8% |
| 4934213 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.53 | 46.0 | 4.16e-01 | 97.9% | 97.7% |
| 3605264 | 2007.2.3.9 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › PTPlike_phytase | 0.52 | 46.0 | 3.17e-01 | 100.0% | 40.0% |
| 3237653 | 109.26.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains › Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains › Nucleoporin_C | 0.52 | 39.0 | 2.30e-01 | 80.0% | 25.5% |
| 3969345 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.51 | 42.0 | 3.19e-01 | 91.6% | 37.7% |