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OP380602.1__UYD59530.1__JNMOADIG_00001__00001

Bact-Vir

OP380602.1__UYD59530.1__JNMOADIG_00001__00001

Identity

Accession:
OP380602 ↗
Kingdom:
phage

Quality

91.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Straboviridae› Biquartavirus› Aeromonas_phage_avDM5

TaxID: 3101603

Cluster

View cluster (6 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 55-119
PDB
Domain cluster: rep: OM471789.1__UMM62452.1__X__00001__D31-84
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1wosA04 2.40.30.110 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains 0.62 43.0 3.92e-01 100.0% 54.7%
2auaA01 3.20.170.10 Alpha Beta › Alpha-Beta Barrel › ADP-ribosylation fold › ADP-ribosylation domain 0.61 49.0 4.23e-01 90.8% 89.8%
3wndA03 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.61 51.0 4.49e-01 100.0% 63.8%
4paaA05 2.40.30.110 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains 0.59 41.0 3.91e-01 100.0% 60.8%
3p26A03 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.57 51.0 4.29e-01 100.0% 61.8%
3g8rA02 3.90.1210.10 Alpha Beta › Alpha-Beta Complex › Type Iii Antifreeze Protein Isoform Hplc 12 › Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain 0.57 45.0 4.29e-01 92.3% 75.3%
3frnA02 3.90.1210.10 Alpha Beta › Alpha-Beta Complex › Type Iii Antifreeze Protein Isoform Hplc 12 › Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain 0.56 46.0 4.61e-01 92.3% 91.2%
2wqpA02 3.90.1210.10 Alpha Beta › Alpha-Beta Complex › Type Iii Antifreeze Protein Isoform Hplc 12 › Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain 0.56 44.0 4.29e-01 90.8% 79.5%
4kh9A03 2.60.120.1370 Mainly Beta › Sandwich › Jelly Rolls › 0.52 36.0 3.10e-01 72.3% 96.5%
2ba0A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 40.0 3.65e-01 84.6% 92.0%
1k8mA00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.51 44.0 4.07e-01 100.0% 89.7%
ECOD (25)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4983877 1.1.8.1 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D3 0.66 52.0 4.64e-01 100.0% 61.1%
4966530 1.1.8.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain 0.66 51.0 5.02e-01 100.0% 78.6%
3946545 1.1.8.21 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › Baseplate_J 0.65 46.0 4.23e-01 100.0% 57.6%
5046884 1.1.8.1 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D3 0.64 51.0 4.60e-01 100.0% 62.9%
4123849 1.1.8.3 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GCV_T_C 0.62 42.0 3.91e-01 100.0% 55.3%
4948145 1.1.8.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain 0.61 43.0 3.91e-01 100.0% 54.4%
5076600 1.1.8.3 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GCV_T_C 0.59 42.0 3.79e-01 100.0% 54.4%
3502343 1.1.8.11 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C 0.59 49.0 4.30e-01 100.0% 61.6%
3393782 70.3.1.3 ↗ beta barrels › beta-clip › SET domain-like › SET domain-like › SAF 0.58 46.0 4.75e-01 90.8% 95.0%
3970319 1.1.8.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain 0.58 41.0 3.76e-01 100.0% 55.6%
4159528 70.3.1.3 ↗ beta barrels › beta-clip › SET domain-like › SET domain-like › SAF 0.58 45.0 4.48e-01 90.8% 81.4%
2756432 1.1.8.11 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C 0.58 51.0 4.00e-01 100.0% 49.3%
4268048 70.3.1.3 ↗ beta barrels › beta-clip › SET domain-like › SET domain-like › SAF 0.57 47.0 4.72e-01 90.8% 92.3%
4588640 70.3.1.3 ↗ beta barrels › beta-clip › SET domain-like › SET domain-like › SAF 0.57 47.0 4.62e-01 90.8% 88.6%
3729551 1.1.8.11 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C 0.57 51.0 4.22e-01 100.0% 60.0%
5060627 1.1.8.11 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C 0.57 51.0 4.34e-01 100.0% 66.7%
3960359 1.1.8.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain 0.57 50.0 4.10e-01 100.0% 56.7%
185265 70.3.1.3 ↗ beta barrels › beta-clip › SET domain-like › SET domain-like › SAF 0.56 46.0 4.66e-01 92.3% 93.9%
5083817 70.4.1.0 ↗ beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) 0.56 49.0 5.00e-01 98.5% 100.0%
224541 70.3.1.3 ↗ beta barrels › beta-clip › SET domain-like › SET domain-like › SAF 0.55 44.0 4.36e-01 90.8% 85.3%
4932859 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.53 42.0 3.62e-01 87.7% 90.5%
3962108 70.3.1.3 ↗ beta barrels › beta-clip › SET domain-like › SET domain-like › SAF 0.53 43.0 4.30e-01 93.8% 88.6%
4300476 304.102.1.4 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N 0.52 36.0 2.58e-01 100.0% 21.8%
5011922 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.52 38.0 3.68e-01 81.5% 94.7%
3287503 2.3.1.0 ↗ beta barrels › OB-fold › TIMP-like › TIMP-like 0.52 38.0 3.06e-01 80.0% 68.1%