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OP380603.1__UYD59842.1__LEHPIFIF_00069__00069
Bact-VirOP380603.1__UYD59842.1__LEHPIFIF_00069__00069
Identity
- Accession:
- OP380603 ↗
- Kingdom:
- phage
Quality
87.2
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Biquartavirus›
Aeromonas_phage_avDM9-HANS
TaxID: 3101604
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 15-156
Domain cluster:
rep: MK327936.1__QBO63285.1__G2540_00043__00043__D2-173
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3kcnB00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.61 | 44.0 | 4.48e-01 | 100.0% | 75.9% |
| 5eanA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 46.0 | 4.09e-01 | 100.0% | 56.5% |
| 1reqA02 | 3.40.50.280 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin-binding domain | 0.59 | 45.0 | 4.32e-01 | 100.0% | 69.5% |
| 3dfzB01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.58 | 39.0 | 4.20e-01 | 100.0% | 79.2% |
| 4gudB00 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.57 | 54.0 | 4.72e-01 | 100.0% | 89.6% |
| 1tltA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 44.0 | 4.73e-01 | 97.9% | 97.5% |
| 3al2A01 | 3.40.50.10190 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain | 0.56 | 42.0 | 4.48e-01 | 95.1% | 91.1% |
| 3r74B02 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.55 | 50.0 | 4.53e-01 | 100.0% | 89.6% |
| 4oifA02 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.55 | 51.0 | 4.36e-01 | 100.0% | 87.6% |
| 2yjnA01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.54 | 49.0 | 4.11e-01 | 100.0% | 92.3% |
| 4zciA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 49.0 | 4.57e-01 | 100.0% | 86.2% |
| 3u7rA00 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.53 | 49.0 | 4.52e-01 | 100.0% | 90.7% |
| 3uk7A01 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.53 | 49.0 | 4.43e-01 | 100.0% | 91.6% |
| 1hyhA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 47.0 | 4.79e-01 | 100.0% | 97.9% |
| 3ttyA02 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.53 | 49.0 | 4.20e-01 | 100.0% | 88.6% |
| 2d4aD01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 48.0 | 4.87e-01 | 98.6% | 99.3% |
| 3hcwA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.53 | 46.0 | 4.63e-01 | 100.0% | 94.3% |
| 2vrnA00 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.52 | 47.0 | 4.35e-01 | 100.0% | 86.5% |
| 3l6dA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 44.0 | 4.22e-01 | 100.0% | 78.7% |
| 3fi9A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 45.0 | 4.57e-01 | 98.6% | 93.7% |
| 1yh0A02 | 3.40.50.1370 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase | 0.51 | 45.0 | 4.24e-01 | 97.2% | 86.0% |
| 1mkyA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 46.0 | 4.58e-01 | 100.0% | 94.7% |
| 4xr9B01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 46.0 | 4.05e-01 | 100.0% | 77.7% |
| 1u0tB01 | 3.40.50.10330 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Probable inorganic polyphosphate/atp-NAD kinase; domain 1 | 0.51 | 39.0 | 4.03e-01 | 98.6% | 84.2% |
| 3rhtA00 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.51 | 47.0 | 3.83e-01 | 100.0% | 84.5% |
ECOD (44)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4933349 | 2007.2.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Phosphotyrosine protein phosphatases I-like | 0.71 | 34.0 | 4.49e-01 | 100.0% | 82.5% |
| 4252878 | 2007.1.3.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › UPF0004 | 0.63 | 46.0 | 4.70e-01 | 100.0% | 78.5% |
| 3360159 | 2007.9.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain › TIR | 0.62 | 57.0 | 5.42e-01 | 100.0% | 92.1% |
| 2098131 | 2007.1.1.13 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › Glyco_hydro_42M | 0.61 | 47.0 | 4.06e-01 | 95.1% | 52.6% |
| 4653764 | 2003.1.1.120 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD-bd_HRPKS_sdrA | 0.61 | 51.0 | 4.60e-01 | 100.0% | 65.6% |
| 4044629 | 7568.1.1.15 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › BRCT_TopB1_SLF1 | 0.60 | 40.0 | 4.44e-01 | 95.1% | 85.2% |
| 4653628 | 2003.1.1.120 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD-bd_HRPKS_sdrA | 0.59 | 49.0 | 4.59e-01 | 100.0% | 70.6% |
| 5037677 | 2007.1.10.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › PrpR receptor domain-like | 0.59 | 38.0 | 4.51e-01 | 71.1% | 97.9% |
| 3962870 | 2003.1.10.29 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain › PF27100 | 0.58 | 43.0 | 4.44e-01 | 78.2% | 80.6% |
| 3610925 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.57 | 51.0 | 4.56e-01 | 99.3% | 94.1% |
| 4235164 | 2003.1.1.22 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GFO_IDH_MocA | 0.57 | 44.0 | 4.79e-01 | 98.6% | 96.7% |
| 4561342 | 2007.1.3.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › UPF0004 | 0.56 | 42.0 | 3.97e-01 | 100.0% | 64.7% |
| 3932663 | 2007.9.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain | 0.56 | 51.0 | 4.99e-01 | 100.0% | 90.3% |
| 5011225 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.56 | 51.0 | 4.82e-01 | 100.0% | 97.6% |
| 4084916 | 2007.9.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain › TIR | 0.56 | 47.0 | 4.43e-01 | 100.0% | 74.3% |
| 4023480 | 129.1.1.54 ↗ | alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › NAD-bd_HRPKS_sdrA | 0.55 | 50.0 | 4.68e-01 | 100.0% | 80.6% |
| 4965363 | 2003.1.12.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › UDPG/MGDP dehydrogenase C-terminal domain › UDPG_MGDP_dh_C | 0.55 | 42.0 | 4.07e-01 | 98.6% | 72.3% |
| 5001902 | 2003.1.1.27 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › PDH_N | 0.55 | 46.0 | 3.64e-01 | 100.0% | 45.0% |
| 5069762 | 2007.1.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like | 0.55 | 50.0 | 4.01e-01 | 100.0% | 92.9% |
| 4446028 | 2007.1.1.13 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › Glyco_hydro_42M | 0.54 | 51.0 | 4.40e-01 | 100.0% | 90.5% |
| 4999435 | 2007.1.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like | 0.54 | 50.0 | 4.36e-01 | 100.0% | 90.5% |
| 4321282 | 2003.1.1.46 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › F420_oxidored | 0.54 | 45.0 | 4.38e-01 | 100.0% | 80.6% |
| 4947113 | 2003.1.1.22 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GFO_IDH_MocA | 0.54 | 45.0 | 4.50e-01 | 100.0% | 87.6% |
| 4603975 | 2007.12.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Beta-D-glucan exohydrolase, C-terminal domain › Beta-D-glucan exohydrolase, C-terminal domain › Glyco_hydro_3_C | 0.53 | 48.0 | 3.95e-01 | 100.0% | 70.2% |
| 4949763 | 2003.1.1.2 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Ldh_1_N | 0.53 | 46.0 | 4.72e-01 | 97.2% | 97.8% |
| 5012028 | 2003.1.1.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase | 0.53 | 46.0 | 3.64e-01 | 96.5% | 67.1% |
| 2993855 | 2003.1.1.52 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › RmlD_sub_bind | 0.53 | 48.0 | 3.83e-01 | 100.0% | 92.7% |
| 2062995 | 2007.1.1.13 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › Glyco_hydro_42M | 0.53 | 49.0 | 4.19e-01 | 100.0% | 90.4% |
| 5006804 | 2007.1.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › GATase | 0.52 | 48.0 | 4.19e-01 | 100.0% | 93.9% |
| 4172988 | 2007.1.3.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › UPF0004 | 0.52 | 43.0 | 4.41e-01 | 100.0% | 89.3% |
| 3609831 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.52 | 47.0 | 4.65e-01 | 100.0% | 97.4% |
| 4011240 | 2007.12.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Beta-D-glucan exohydrolase, C-terminal domain › Beta-D-glucan exohydrolase, C-terminal domain | 0.52 | 47.0 | 3.79e-01 | 100.0% | 67.5% |
| 5028245 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.52 | 48.0 | 4.67e-01 | 100.0% | 98.7% |
| 5043079 | 2499.1.1.1 ↗ | a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 | 0.52 | 47.0 | 3.53e-01 | 100.0% | 65.0% |
| 4446191 | 2003.1.1.2 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Ldh_1_N | 0.52 | 47.0 | 4.68e-01 | 98.6% | 98.0% |
| 3895050 | 2008.1.1.7 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 | 0.52 | 41.0 | 3.90e-01 | 100.0% | 70.6% |
| 5077752 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.52 | 40.0 | 3.32e-01 | 99.3% | 46.0% |
| 4288654 | 2008.1.1.7 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 | 0.51 | 40.0 | 4.05e-01 | 100.0% | 82.8% |
| 3941115 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.51 | 32.0 | 3.80e-01 | 100.0% | 96.7% |
| 5032360 | 2003.1.1.45 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › UDPG_MGDP_dh_N | 0.51 | 46.0 | 4.04e-01 | 100.0% | 89.3% |
| 3639265 | 2003.1.1.53 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NmrA | 0.51 | 45.0 | 3.52e-01 | 100.0% | 94.2% |
| 4955835 | 2498.2.1.0 ↗ | mixed a+b and a/b › Zincin-like › beta-N-acetylhexosaminidase-like domain › beta-N-acetylhexosaminidase-like domain | 0.51 | 37.0 | 3.93e-01 | 100.0% | 83.8% |
| 3972535 | 2003.1.1.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase | 0.51 | 45.0 | 3.56e-01 | 100.0% | 88.1% |
| 5081446 | 2007.1.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like | 0.50 | 45.0 | 3.61e-01 | 100.0% | 91.7% |
D2
high
residues 159-347
Domain cluster:
rep: BC_09192017_0_5m_scaffold_0_prodigal-single.1__X__X__00276__D51-186
D3
high
residues 389-457_695-784
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7ccmB01 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.64 | 36.0 | 3.81e-01 | 84.9% | 60.1% |
| 7zd5C01 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.54 | 43.0 | 3.44e-01 | 84.3% | 94.6% |
| 2w02B01 | 1.10.150.640 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › AcsD, thumb domain, helical bundle | 0.53 | 26.0 | 3.58e-01 | 89.3% | 95.9% |
| 2uuqA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.53 | 38.0 | 2.86e-01 | 74.8% | 69.8% |
| 4lxjA01 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.53 | 38.0 | 2.86e-01 | 74.8% | 87.2% |
| 4uiqB00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.52 | 35.0 | 3.61e-01 | 85.5% | 69.9% |
| 5nx5B00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.52 | 38.0 | 3.16e-01 | 76.1% | 96.9% |
| 1nr6A00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.50 | 38.0 | 2.69e-01 | 77.4% | 72.7% |
| 4zvaA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.50 | 33.0 | 3.47e-01 | 85.5% | 71.1% |
D4
medium
residues 458-484_630-694
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1qf9A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 43.0 | 3.40e-01 | 88.0% | 57.2% |
| 2bwjA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 41.0 | 3.24e-01 | 88.0% | 55.6% |
| 4dmvA01 | 1.20.58.1190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.51 | 35.0 | 3.62e-01 | 81.5% | 76.5% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3619659 | 2004.1.1.41 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ADK | 0.53 | 45.0 | 2.90e-01 | 92.4% | 35.5% |
| 3902569 | 2004.1.1.41 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ADK | 0.53 | 43.0 | 3.37e-01 | 89.1% | 51.4% |
| None | — | 0.53 | 43.0 | 3.37e-01 | 88.0% | 51.0% | |
| 4997033 | 2002.1.1.418 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DUF7388 | 0.51 | 39.0 | 2.93e-01 | 84.8% | 49.4% |
D5
medium
residues 485-629
Domain cluster:
representative