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OP380603.1__UYD59955.1__LEHPIFIF_00182__00182

Bact-Vir

OP380603.1__UYD59955.1__LEHPIFIF_00182__00182

Identity

Accession:
OP380603 ↗
Kingdom:
phage

Quality

96.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Straboviridae› Biquartavirus› Aeromonas_phage_avDM9-HANS

TaxID: 3101604

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-51
PDB
Domain cluster: rep: OP292654.1__UYE98907.1__XbC2_507__00478__D116-176
CATH (48)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1wzoA01 2.30.30.370 Mainly Beta › Roll › SH3 type barrels. › FAH 0.77 51.0 5.52e-01 100.0% 87.5%
3lx7A01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 57.0 5.97e-01 100.0% 91.3%
1txqA00 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.71 62.0 5.47e-01 100.0% 90.5%
3pieC09 2.30.30.750 Mainly Beta › Roll › SH3 type barrels. › 0.70 62.0 4.98e-01 100.0% 66.7%
1whjA00 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.70 61.0 4.84e-01 100.0% 64.7%
2fhdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 61.0 5.67e-01 100.0% 85.5%
2eqjA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 58.0 5.26e-01 100.0% 71.2%
2heqA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 59.0 5.81e-01 100.0% 100.0%
1m9sA03 2.30.30.170 Mainly Beta › Roll › SH3 type barrels. › 0.67 57.0 5.06e-01 100.0% 89.3%
1jegA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 58.0 5.51e-01 100.0% 95.0%
2n88A00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.66 46.0 4.47e-01 76.0% 75.9%
4oelB00 2.40.50.170 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Cysteine proteinases. Chain C 0.64 51.0 4.65e-01 90.0% 76.8%
1wgsA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.64 56.0 4.13e-01 100.0% 40.6%
1vq8A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 46.0 4.09e-01 80.0% 64.1%
2f5kA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 54.0 5.48e-01 98.0% 100.0%
4fnfA00 2.40.50.50 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.63 50.0 4.09e-01 90.0% 89.8%
3be3A00 2.30.30.320 Mainly Beta › Roll › SH3 type barrels. › DUF1653-like domain 0.63 55.0 4.80e-01 100.0% 82.9%
2k57A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.62 51.0 5.04e-01 100.0% 85.5%
1o5yA00 3.10.690.10 Alpha Beta › Roll › Bifunctional nuclease domain › Bifunctional nuclease domain 0.62 43.0 3.18e-01 74.0% 79.0%
2eyqA05 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.62 52.0 5.04e-01 100.0% 84.7%
3kbgA02 2.40.50.740 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain 0.61 42.0 4.14e-01 72.0% 98.1%
2ra2B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.61 47.0 4.59e-01 100.0% 79.3%
1khiA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.60 50.0 4.51e-01 100.0% 77.3%
2lqkA00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.59 50.0 4.55e-01 100.0% 81.4%
4dq2A03 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.59 46.0 4.77e-01 100.0% 97.9%
1rl2A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 44.0 4.30e-01 82.0% 87.5%
1m4zA01 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.58 50.0 3.41e-01 100.0% 49.5%
6iouA02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.58 39.0 3.10e-01 72.0% 100.0%
1pjxA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.57 46.0 2.90e-01 94.0% 22.3%
2lt1A00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.56 45.0 4.13e-01 100.0% 78.7%
1ej6B00 3.90.1830.10 Alpha Beta › Alpha-Beta Complex › Inner capsid protein lambda-1 › Inner capsid protein lambda-1 0.55 45.0 2.46e-01 94.0% 7.0%
1inlC02 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.55 44.0 4.18e-01 94.0% 78.1%
2l3rA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.54 43.0 4.02e-01 100.0% 79.5%
6pxyA01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.54 41.0 3.26e-01 88.0% 100.0%
2aqjA00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.54 45.0 2.61e-01 98.0% 40.2%
3o58B01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.54 40.0 3.58e-01 82.0% 64.0%
3o4fC01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.54 43.0 4.36e-01 94.0% 94.1%
2o07A01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.53 43.0 4.13e-01 94.0% 84.7%
6y48D01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 43.0 2.75e-01 98.0% 43.0%
4wfsA01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.53 41.0 2.76e-01 90.0% 32.0%
3luuA00 3.30.2020.30 Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › 0.53 43.0 3.71e-01 98.0% 79.8%
3fgbA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 42.0 2.58e-01 92.0% 24.1%
1iy9A02 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.52 41.0 4.11e-01 94.0% 92.3%
2e5wA01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.52 41.0 4.04e-01 94.0% 85.7%
5uaoC00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.51 41.0 2.40e-01 96.0% 38.3%
1av4A03 2.70.98.20 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain 0.51 38.0 2.31e-01 84.0% 78.5%
3gwfA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.51 40.0 2.63e-01 98.0% 46.4%
3kyhC01 3.30.470.30 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme 0.51 38.0 2.48e-01 82.0% 79.2%
ECOD (71)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5017637 4.1.1.458 ↗ beta barrels › SH3 › SH3 › SH3 › DUF2098 0.85 67.0 6.49e-01 100.0% 76.4%
3230533 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.84 62.0 6.50e-01 98.0% 86.7%
3713588 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 68.0 5.41e-01 100.0% 65.3%
4480519 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 64.0 5.98e-01 100.0% 78.3%
4110878 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 60.0 6.32e-01 98.0% 100.0%
4616207 4.1.1.448 ↗ beta barrels › SH3 › SH3 › SH3 › DUF5372 0.72 61.0 6.17e-01 94.0% 96.0%
3585492 4.1.1.103 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_12 0.71 63.0 4.84e-01 100.0% 58.2%
3419491 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 63.0 5.89e-01 100.0% 86.7%
3228213 4.8.1.2 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow 0.69 52.0 4.79e-01 82.0% 69.2%
3523144 4.1.1.20 ↗ beta barrels › SH3 › SH3 › SH3 › BAH 0.69 60.0 4.06e-01 100.0% 41.6%
3511007 4.8.1.6 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.69 60.0 4.54e-01 100.0% 50.0%
3277860 4.1.1.368 ↗ beta barrels › SH3 › SH3 › SH3 › DUF3097_N 0.68 56.0 5.19e-01 100.0% 72.3%
5026824 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 59.0 5.29e-01 100.0% 70.0%
3739064 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 59.0 5.47e-01 100.0% 87.7%
3781209 4.1.1.308 ↗ beta barrels › SH3 › SH3 › SH3 › PF31073 0.67 60.0 4.75e-01 100.0% 53.0%
3702154 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 58.0 5.09e-01 100.0% 68.0%
3768116 4.8.1.6 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.67 58.0 3.80e-01 100.0% 27.0%
3553413 4.8.1.6 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.66 56.0 4.81e-01 100.0% 68.2%
3022070 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.65 56.0 4.37e-01 100.0% 69.3%
3930845 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.65 48.0 4.35e-01 84.0% 58.6%
2527304 4.8.1.6 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.64 55.0 5.25e-01 100.0% 86.9%
3260945 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 56.0 5.28e-01 100.0% 90.0%
3385654 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 53.0 4.12e-01 98.0% 64.2%
4120629 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.63 55.0 4.85e-01 100.0% 68.0%
3931602 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.62 46.0 4.19e-01 82.0% 61.4%
3687350 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 52.0 5.13e-01 100.0% 90.9%
4327595 4.1.1.402 ↗ beta barrels › SH3 › SH3 › SH3 › DUF2761 0.61 52.0 4.30e-01 100.0% 53.7%
3676844 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 52.0 4.57e-01 100.0% 65.3%
3329059 4.1.1.141 ↗ beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor 0.61 51.0 5.12e-01 98.0% 96.0%
3979842 4.1.1.45 ↗ beta barrels › SH3 › SH3 › SH3 › DUF903 0.60 47.0 4.62e-01 100.0% 83.6%
3717955 219.1.1.4 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C2 0.60 52.0 3.14e-01 100.0% 32.8%
4986272 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.59 42.0 4.12e-01 92.0% 70.9%
3403184 719.2.1.1 ↗ beta barrels › XRCC4, N-terminal domain-like › NE0471 N-terminal domain-like › NE0471 N-terminal domain-like › GBBH-like_N 0.59 48.0 3.89e-01 92.0% 78.0%
4195627 4.6.1.6 ↗ beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC_RimM 0.58 50.0 4.66e-01 100.0% 83.1%
3396958 719.2.1.1 ↗ beta barrels › XRCC4, N-terminal domain-like › NE0471 N-terminal domain-like › NE0471 N-terminal domain-like › GBBH-like_N 0.57 47.0 3.84e-01 96.0% 83.0%
4002724 2003.1.2.58 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox, Pyr_redox_2 0.56 46.0 2.84e-01 100.0% 36.2%
3403990 719.2.1.1 ↗ beta barrels › XRCC4, N-terminal domain-like › NE0471 N-terminal domain-like › NE0471 N-terminal domain-like › GBBH-like_N 0.55 45.0 3.69e-01 96.0% 84.5%
3242411 719.2.1.1 ↗ beta barrels › XRCC4, N-terminal domain-like › NE0471 N-terminal domain-like › NE0471 N-terminal domain-like › GBBH-like_N 0.55 46.0 3.65e-01 96.0% 81.8%
3910381 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.55 43.0 2.47e-01 92.0% 14.3%
4421675 2003.1.2.25 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.54 46.0 3.13e-01 98.0% 56.5%
3958604 2003.1.2.5 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FMO-like 0.54 42.0 2.88e-01 90.0% 21.1%
3239022 2003.1.3.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO 0.54 44.0 2.68e-01 98.0% 49.8%
3831756 2003.1.2.16 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3,NAD_binding_8 0.54 45.0 2.90e-01 98.0% 44.4%
3166879 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.54 43.0 4.10e-01 100.0% 89.2%
None — 0.54 45.0 2.79e-01 100.0% 33.7%
4635782 331.2.1.0 ↗ a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain 0.53 46.0 3.66e-01 98.0% 63.5%
5044391 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.53 44.0 4.42e-01 94.0% 98.0%
4537528 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.53 42.0 3.98e-01 100.0% 90.0%
None — 0.53 44.0 2.75e-01 100.0% 33.7%
4195918 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.53 41.0 2.73e-01 92.0% 31.4%
3300781 5.1.4.226 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DUF7899 0.53 40.0 2.68e-01 90.0% 40.8%
3276003 2003.1.2.16 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3,NAD_binding_8 0.53 44.0 2.98e-01 98.0% 55.5%
4561895 5.1.3.19 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Hira 0.53 44.0 2.96e-01 96.0% 40.5%
3683580 2003.1.2.16 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3,NAD_binding_8 0.52 44.0 2.86e-01 98.0% 49.4%
3634232 2003.1.2.15 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.52 44.0 2.62e-01 100.0% 34.4%
3343842 2003.1.2.15 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.52 46.0 2.72e-01 100.0% 37.3%
3969289 2003.1.2.16 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3,NAD_binding_8 0.52 42.0 2.58e-01 98.0% 39.2%
3466109 2003.1.2.16 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3,NAD_binding_8 0.52 45.0 2.82e-01 100.0% 44.8%
4875445 2003.1.2.6 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FMO-like,NAD_binding_8 0.52 40.0 3.05e-01 96.0% 86.1%
3259156 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.52 42.0 3.29e-01 98.0% 99.2%
3269433 2003.1.2.15 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.52 42.0 2.54e-01 98.0% 34.0%
3286035 2003.1.2.69 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NAD_binding_8, Pyr_redox_3 0.52 43.0 2.54e-01 96.0% 25.0%
3959289 2003.1.2.69 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NAD_binding_8, Pyr_redox_3 0.52 42.0 2.95e-01 98.0% 67.9%
4399722 1013.1.1.2 ↗ beta duplicates or obligate multimers › WD repeat-containing protein 48 ancillary domain › WD repeat-containing protein 48 ancillary domain › WD repeat-containing protein 48 ancillary domain › WD40 0.52 39.0 2.28e-01 84.0% 69.3%
4066000 2003.1.2.15 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.52 44.0 2.66e-01 98.0% 36.7%
4013709 2003.1.2.58 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox, Pyr_redox_2 0.51 43.0 2.62e-01 100.0% 24.6%
4549004 2003.1.2.49 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_2+FAD_binding_3 0.51 44.0 2.68e-01 100.0% 38.7%
3635145 2003.1.2.58 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox, Pyr_redox_2 0.51 43.0 2.63e-01 100.0% 24.5%
3335386 2003.1.2.15 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.50 45.0 2.69e-01 100.0% 37.2%
3290740 2003.1.2.69 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NAD_binding_8, Pyr_redox_3 0.50 39.0 2.34e-01 96.0% 26.5%
None — 0.50 43.0 2.77e-01 100.0% 45.5%