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OP380604.1__UYD60233.1__OPFAMLBM_00234__00212
Bact-VirOP380604.1__UYD60233.1__OPFAMLBM_00234__00212
Identity
- Accession:
- OP380604 ↗
- Kingdom:
- phage
Quality
74.7
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Chrysonvirus›
Aeromonas_phage_avDM12-TAAL
TaxID: 3101605
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 16-98
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3pjvD02 | 6.20.270.20 | Special › Other non-globular › Carboxypeptidase Inhibitor; Chain A › LapD/MoxY periplasmic domain | 0.58 | 25.0 | 3.20e-01 | 81.9% | 68.0% |
| 3syyA00 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.56 | 52.0 | 3.85e-01 | 100.0% | 63.4% |
| 1bm9A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 49.0 | 4.27e-01 | 96.4% | 75.0% |
| 1uzxA00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.53 | 39.0 | 3.39e-01 | 79.5% | 71.4% |
| 2e57B01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.53 | 43.0 | 2.88e-01 | 88.0% | 31.2% |
| 7wu7501 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.52 | 40.0 | 3.52e-01 | 100.0% | 54.8% |
| 4esbA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 44.0 | 4.13e-01 | 94.0% | 78.6% |
| 1sfxB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 40.0 | 3.73e-01 | 91.6% | 66.3% |
| 1e8oA00 | 3.30.720.10 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 | 0.51 | 36.0 | 3.80e-01 | 74.7% | 100.0% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3829017 | 263.1.1.1 ↗ | a+b three layers › SRF-like › SRF-like › SRF-like › SRF-TF | 0.80 | 35.0 | 3.67e-01 | 80.7% | 45.3% |
| 3512189 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.76 | 52.0 | 4.97e-01 | 71.1% | 91.6% |
| 3412059 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.76 | 52.0 | 4.79e-01 | 71.1% | 89.5% |
| 140754 | 304.54.1.1 ↗ | a+b two layers › Alpha-beta plaits › CcmK-like › CcmK-like › BMC | 0.62 | 43.0 | 4.17e-01 | 72.3% | 81.9% |
| 5010738 | 101.1.2.30 ↗ | alpha arrays › HTH › HTH › winged helix domain › TrmB | 0.62 | 48.0 | 4.19e-01 | 100.0% | 56.8% |
| 5028087 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.62 | 48.0 | 4.30e-01 | 83.1% | 77.4% |
| 3239569 | 5001.1.1.25 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Sru | 0.61 | 51.0 | 3.38e-01 | 89.2% | 50.8% |
| 4889219 | 3937.1.1.3 ↗ | alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 › Pannexin_like | 0.60 | 48.0 | 3.26e-01 | 86.7% | 70.3% |
| 5043775 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 46.0 | 3.82e-01 | 98.8% | 49.3% |
| 3750868 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.58 | 52.0 | 4.03e-01 | 97.6% | 88.9% |
| 3724779 | 101.1.2.236 ↗ | alpha arrays › HTH › HTH › winged helix domain › POLR3C_WHD | 0.58 | 47.0 | 3.64e-01 | 85.5% | 63.5% |
| 3741614 | 101.1.2.236 ↗ | alpha arrays › HTH › HTH › winged helix domain › POLR3C_WHD | 0.57 | 48.0 | 3.85e-01 | 92.8% | 64.8% |
| 3218266 | 5001.1.1.41 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srw | 0.57 | 51.0 | 3.35e-01 | 100.0% | 60.6% |
| 4004118 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.55 | 45.0 | 3.46e-01 | 100.0% | 39.5% |
| 2609 | 101.1.2.38 ↗ | alpha arrays › HTH › HTH › winged helix domain › RTP | 0.55 | 49.0 | 4.27e-01 | 96.4% | 75.0% |
| 4135068 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.55 | 47.0 | 2.95e-01 | 92.8% | 25.1% |
| 4604112 | 213.1.1.8 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › HlyC | 0.54 | 46.0 | 3.71e-01 | 94.0% | 75.0% |
| 3238364 | 109.4.1.32 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MIF4G | 0.53 | 45.0 | 2.93e-01 | 91.6% | 35.7% |
| 4953244 | 300.1.1.0 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease | 0.52 | 37.0 | 3.04e-01 | 74.7% | 84.0% |
| 4026109 | 220.1.1.21 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SPT16 | 0.52 | 36.0 | 3.18e-01 | 72.3% | 74.2% |
| 4928248 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 43.0 | 3.72e-01 | 94.0% | 58.5% |
| 3178436 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.51 | 42.0 | 2.75e-01 | 86.7% | 24.2% |
| 5048466 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 45.0 | 3.73e-01 | 100.0% | 56.4% |