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OP380606.1__UYD60655.1__NHNEHLNL_00059__00059
Bact-VirOP380606.1__UYD60655.1__NHNEHLNL_00059__00059
Identity
- Accession:
- OP380606 ↗
- Kingdom:
- phage
Quality
69.5
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Biquartavirus›
Aeromonas_phage_avDM1
TaxID: 3246724
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 26-75
Domain cluster:
representative
CATH (40)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6ldkA01 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.83 | 71.0 | 4.81e-01 | 98.0% | 27.3% |
| 1wa8A00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.83 | 72.0 | 5.75e-01 | 98.0% | 60.6% |
| 2yxyA01 | 1.10.287.880 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Hypothetical protein YfhH domain | 0.80 | 63.0 | 6.30e-01 | 94.0% | 86.0% |
| 1b3qA01 | 1.10.287.560 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Histidine kinase CheA-like, homodimeric domain | 0.80 | 70.0 | 6.55e-01 | 98.0% | 79.0% |
| 8fbnB01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.79 | 65.0 | 4.17e-01 | 96.0% | 20.3% |
| 2yb5F01 | 1.20.1280.250 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.78 | 66.0 | 5.54e-01 | 96.0% | 61.6% |
| 6hwjA01 | 3.90.1200.10 | Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe | 0.77 | 63.0 | 3.99e-01 | 100.0% | 18.8% |
| 1z0jB00 | 4.10.860.20 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › Rabenosyn, Rab binding domain | 0.75 | 65.0 | 6.53e-01 | 100.0% | 100.0% |
| 5o5jT00 | 1.20.58.110 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Ribosomal protein S20 | 0.75 | 64.0 | 5.36e-01 | 96.0% | 56.5% |
| 3lphC00 | 6.10.140.630 | Special › Helix non-globular › Helix Hairpins › | 0.74 | 63.0 | 6.04e-01 | 96.0% | 100.0% |
| 1skvA00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.74 | 59.0 | 5.55e-01 | 98.0% | 71.9% |
| 4u1cA01 | 4.10.860.10 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › UVR domain | 0.74 | 59.0 | 5.91e-01 | 94.0% | 84.6% |
| 4gzrB00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.74 | 61.0 | 5.44e-01 | 98.0% | 67.5% |
| 4i0xG00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.73 | 62.0 | 5.67e-01 | 98.0% | 72.1% |
| 6tkvA01 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.73 | 60.0 | 5.55e-01 | 98.0% | 88.2% |
| 2om6A02 | 1.10.150.400 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.73 | 62.0 | 5.28e-01 | 94.0% | 70.9% |
| 1hy0A01 | 1.10.275.10 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) | 0.72 | 60.0 | 4.34e-01 | 92.0% | 37.2% |
| 6gy8A01 | 1.20.1170.10 | Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › | 0.72 | 60.0 | 3.71e-01 | 100.0% | 51.8% |
| 3nbxX03 | 1.20.58.1510 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.71 | 57.0 | 4.69e-01 | 94.0% | 67.3% |
| 2vkzA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.71 | 61.0 | 3.90e-01 | 100.0% | 26.7% |
| 1pd3A00 | 1.10.287.230 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.71 | 59.0 | 5.81e-01 | 98.0% | 94.4% |
| 2mpkA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.69 | 57.0 | 5.13e-01 | 98.0% | 78.4% |
| 2rp4A00 | 6.10.280.60 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Transcription factor p53, C-terminal domain | 0.69 | 58.0 | 5.18e-01 | 98.0% | 67.6% |
| 3lssA01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.69 | 55.0 | 4.43e-01 | 98.0% | 42.9% |
| 2p4vA01 | 1.10.287.180 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Transcription elongation factor, GreA/GreB, N-terminal domain | 0.67 | 55.0 | 4.96e-01 | 98.0% | 64.5% |
| 4hteA03 | 1.10.167.30 | Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › | 0.67 | 50.0 | 4.45e-01 | 96.0% | 53.8% |
| 3a8pA02 | 6.10.140.680 | Special › Helix non-globular › Helix Hairpins › | 0.67 | 55.0 | 4.40e-01 | 100.0% | 86.0% |
| 1hr5A00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.67 | 53.0 | 5.39e-01 | 94.0% | 95.8% |
| 2rklF00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.67 | 51.0 | 5.10e-01 | 86.0% | 82.7% |
| 4hz4A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.66 | 56.0 | 4.40e-01 | 98.0% | 47.3% |
| 8b6jF01 | 1.10.287.20 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Ubiquinol-cytochrome C reductase hinge domain | 0.66 | 52.0 | 4.80e-01 | 96.0% | 68.7% |
| 3b2eF00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.66 | 52.0 | 4.97e-01 | 98.0% | 77.4% |
| 8jx6A02 | 2.30.30.780 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 56.0 | 4.39e-01 | 96.0% | 64.1% |
| 4abmD00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.65 | 50.0 | 4.58e-01 | 98.0% | 62.3% |
| 1p49A02 | 1.10.287.550 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.64 | 53.0 | 5.11e-01 | 98.0% | 83.1% |
| 1s35A01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.64 | 52.0 | 4.34e-01 | 100.0% | 51.5% |
| 2uv8A07 | 6.10.140.1410 | Special › Helix non-globular › Helix Hairpins › | 0.63 | 51.0 | 4.40e-01 | 94.0% | 57.6% |
| 4nphA02 | 1.20.1270.330 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.58 | 51.0 | 4.50e-01 | 100.0% | 98.6% |
| 2k9pA00 | 1.10.287.920 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Pheromone alpha factor receptor. | 0.58 | 50.0 | 4.28e-01 | 96.0% | 62.5% |
| 3umcD02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.55 | 44.0 | 3.95e-01 | 94.0% | 64.1% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4939264 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.81 | 71.0 | 6.34e-01 | 98.0% | 80.0% |
| 4465072 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.80 | 70.0 | 5.31e-01 | 98.0% | 42.6% |
| 4255370 | 6130.1.1.1 ↗ | alpha complex topology › Selenocysteine synthase N-terminal domain › Selenocysteine synthase N-terminal domain › Selenocysteine synthase N-terminal domain › Se-cys_synth_N | 0.79 | 58.0 | 5.10e-01 | 84.0% | 55.7% |
| 3354385 | 3755.1.1.22 ↗ | alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related › DUF3475 | 0.77 | 65.0 | 4.33e-01 | 98.0% | 23.9% |
| 4401282 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.77 | 68.0 | 5.17e-01 | 98.0% | 42.6% |
| 222846 | 150.5.1.1 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › WXG100 | 0.77 | 66.0 | 5.43e-01 | 98.0% | 60.2% |
| 3252860 | 609.1.1.0 ↗ | alpha bundles › Domain of poly(ADP-ribose) polymerase › Domain of poly(ADP-ribose) polymerase › Domain of poly(ADP-ribose) polymerase | 0.77 | 60.0 | 4.33e-01 | 86.0% | 31.4% |
| 3937465 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.76 | 67.0 | 4.36e-01 | 98.0% | 22.8% |
| 3192129 | 3755.1.1.0 ↗ | alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related | 0.75 | 64.0 | 4.23e-01 | 98.0% | 23.3% |
| 4784164 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.74 | 63.0 | 5.68e-01 | 98.0% | 82.9% |
| 3896876 | 5001.1.1.9 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › TAS2R | 0.74 | 65.0 | 4.01e-01 | 100.0% | 28.3% |
| 3668496 | 632.1.1.17 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain › Sas10_Utp3 | 0.73 | 63.0 | 5.09e-01 | 98.0% | 49.0% |
| 3424167 | 3826.1.1.84 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › DUF7797 | 0.73 | 61.0 | 5.24e-01 | 94.0% | 61.3% |
| 3373319 | 5059.1.1.8 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › Mg_trans_NIPA | 0.73 | 56.0 | 3.83e-01 | 86.0% | 47.8% |
| 3601054 | 109.4.1.257 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PDS5 | 0.71 | 59.0 | 3.21e-01 | 100.0% | 9.8% |
| 154974 | 150.5.1.1 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › WXG100 | 0.71 | 60.0 | 5.29e-01 | 98.0% | 74.0% |
| 3485149 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.71 | 58.0 | 3.77e-01 | 100.0% | 19.6% |
| 3211184 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.70 | 58.0 | 4.89e-01 | 98.0% | 54.4% |
| 3239667 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.69 | 58.0 | 3.23e-01 | 100.0% | 56.2% |
| 1487328 | 3928.1.1.1 ↗ | alpha bundles › Cell division protein CrgA › Cell division protein CrgA › Cell division protein CrgA › CrgA | 0.69 | 57.0 | 5.77e-01 | 96.0% | 96.0% |
| 3599499 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.68 | 57.0 | 4.15e-01 | 98.0% | 32.7% |
| 4942772 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.68 | 57.0 | 5.31e-01 | 98.0% | 80.0% |
| 3167929 | 192.4.1.0 ↗ | alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) | 0.68 | 57.0 | 5.20e-01 | 98.0% | 77.1% |
| 4026983 | 604.1.1.135 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › DUF155 | 0.67 | 55.0 | 3.66e-01 | 96.0% | 35.9% |