←Back to structures
OP381185.1__UXM65461.1__X__00017
Bact-VirOP381185.1__UXM65461.1__X__00017
Identity
- Accession:
- OP381185 ↗
- Kingdom:
- phage
Quality
71.7
mean pLDDT
Taxonomy
TaxID: 2981581
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-62
Domain cluster:
representative
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3girA02 | 3.30.70.1400 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Aminomethyltransferase beta-barrel domains | 0.65 | 46.0 | 4.09e-01 | 74.6% | 75.6% |
| 2edgA00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.60 | 44.0 | 3.47e-01 | 81.4% | 87.7% |
| 3ervA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.59 | 49.0 | 3.50e-01 | 98.3% | 47.5% |
| 2h1qA01 | 3.30.390.100 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › | 0.58 | 40.0 | 3.11e-01 | 72.9% | 77.3% |
| 3m1uA01 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.57 | 48.0 | 3.56e-01 | 98.3% | 52.6% |
| 5c82A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.57 | 39.0 | 2.84e-01 | 71.2% | 34.1% |
| 3igfA02 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 36.0 | 3.34e-01 | 86.4% | 51.4% |
| 1nrkA02 | 3.30.70.1400 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Aminomethyltransferase beta-barrel domains | 0.57 | 40.0 | 3.55e-01 | 74.6% | 69.0% |
| 3k0xA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 34.0 | 2.87e-01 | 83.1% | 36.4% |
| 4gdxB00 | 3.60.20.40 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Gamma-glutamyltranspeptidase, small (S) subunit | 0.55 | 37.0 | 2.74e-01 | 72.9% | 99.5% |
| 5mmiG01 | 3.90.930.12 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 | 0.55 | 41.0 | 3.68e-01 | 81.4% | 73.8% |
| 1sxjH02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.54 | 42.0 | 3.24e-01 | 84.7% | 43.0% |
| 1bwzA01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.53 | 43.0 | 3.41e-01 | 91.5% | 96.1% |
| 1bvsA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 33.0 | 3.20e-01 | 83.1% | 56.9% |
| 2ix2A01 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.52 | 35.0 | 2.36e-01 | 84.7% | 18.1% |
| 5i47B03 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.52 | 36.0 | 3.15e-01 | 72.9% | 70.5% |
| 2fn0B00 | 3.60.120.10 | Alpha Beta › 4-Layer Sandwich › Anthranilate synthase › Anthranilate synthase | 0.52 | 35.0 | 2.21e-01 | 72.9% | 94.9% |
| 2pt7C01 | 3.30.450.90 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.52 | 40.0 | 3.32e-01 | 84.7% | 84.9% |
| 3mxnB00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 34.0 | 2.64e-01 | 83.1% | 30.5% |
| 3kd6A00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.51 | 42.0 | 2.69e-01 | 98.3% | 18.0% |
| 5gaeG01 | 3.90.930.12 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 | 0.51 | 37.0 | 3.41e-01 | 79.7% | 79.0% |
| 1vx7H01 | 3.90.930.12 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 | 0.50 | 37.0 | 3.41e-01 | 83.1% | 75.3% |
| 2i5bA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.50 | 35.0 | 2.44e-01 | 79.7% | 93.3% |
| 1k0eB00 | 3.60.120.10 | Alpha Beta › 4-Layer Sandwich › Anthranilate synthase › Anthranilate synthase | 0.50 | 41.0 | 2.60e-01 | 100.0% | 84.1% |
| 5fl4A00 | 3.10.200.10 | Alpha Beta › Roll › Carbonic Anhydrase II › Alpha carbonic anhydrase | 0.50 | 36.0 | 2.53e-01 | 83.1% | 92.8% |
| 3w5nA03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.50 | 36.0 | 2.70e-01 | 78.0% | 85.6% |
ECOD (32)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3509403 | 6129.1.1.0 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family | 0.63 | 44.0 | 2.91e-01 | 72.9% | 31.8% |
| 3858171 | 6129.1.1.0 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family | 0.63 | 54.0 | 3.61e-01 | 100.0% | 66.9% |
| 4995742 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.61 | 39.0 | 3.22e-01 | 88.1% | 34.5% |
| 3222222 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.61 | 35.0 | 4.12e-01 | 83.1% | 82.5% |
| 4930469 | 2.4.1.0 ↗ | beta barrels › OB-fold › MOP-like › MOP-like | 0.57 | 33.0 | 3.75e-01 | 83.1% | 82.5% |
| 3301519 | 802.1.1.0 ↗ | a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 | 0.57 | 38.0 | 3.42e-01 | 84.7% | 50.0% |
| 5071748 | 318.1.1.1 ↗ | a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 | 0.56 | 39.0 | 3.65e-01 | 72.9% | 80.0% |
| 3929344 | 3409.1.1.1 ↗ | a+b duplicates or obligate multimers › Vacuolar protein sorting-associated protein 30 BARA domain › Vacuolar protein sorting-associated protein 30 BARA domain › Vacuolar protein sorting-associated protein 30 BARA domain › APG6 | 0.56 | 45.0 | 3.24e-01 | 93.2% | 56.8% |
| 4374595 | 79.1.1.0 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain | 0.56 | 35.0 | 3.39e-01 | 74.6% | 52.9% |
| 1877510 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.56 | 42.0 | 3.82e-01 | 84.7% | 60.0% |
| 3840027 | 218.1.1.9 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › PF27310 | 0.55 | 34.0 | 3.26e-01 | 84.7% | 52.9% |
| 3518927 | 394.1.1.1 ↗ | few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 | 0.55 | 36.0 | 3.96e-01 | 93.2% | 88.9% |
| 4057937 | 227.1.1.4 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 | 0.55 | 43.0 | 3.27e-01 | 84.7% | 41.0% |
| 3576634 | 5.1.2.31 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › BING4CT | 0.53 | 38.0 | 2.82e-01 | 74.6% | 35.9% |
| 4197245 | 318.1.1.1 ↗ | a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 | 0.53 | 39.0 | 3.56e-01 | 79.7% | 76.2% |
| 3407018 | 391.1.2.11 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › VWC2L_2nd | 0.52 | 42.0 | 4.25e-01 | 91.5% | 85.0% |
| 3407274 | 394.1.1.1 ↗ | few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 | 0.52 | 36.0 | 3.92e-01 | 94.9% | 91.7% |
| 3577064 | 394.1.1.0 ↗ | few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins | 0.52 | 36.0 | 3.80e-01 | 98.3% | 86.0% |
| 3407258 | 394.1.1.1 ↗ | few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 | 0.52 | 36.0 | 3.73e-01 | 94.9% | 79.6% |
| 3466927 | 4.2.1.4 ↗ | beta barrels › SH3 › SAND › SAND › TDBD | 0.52 | 43.0 | 3.84e-01 | 98.3% | 85.6% |
| 3823449 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.52 | 41.0 | 2.79e-01 | 98.3% | 28.3% |
| 5079949 | 829.1.1.3 ↗ | a+b duplicates or obligate multimers › NinB › NinB › NinB › DUF1367 | 0.51 | 37.0 | 3.25e-01 | 78.0% | 98.9% |
| 3791485 | 6129.1.1.1 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD | 0.51 | 41.0 | 2.83e-01 | 96.6% | 70.6% |
| 4456820 | 318.1.1.1 ↗ | a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 | 0.51 | 38.0 | 3.53e-01 | 84.7% | 76.2% |
| 3520452 | 394.1.1.1 ↗ | few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 | 0.51 | 35.0 | 3.61e-01 | 94.9% | 78.2% |
| 3946570 | 2004.1.1.42 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE | 0.50 | 38.0 | 2.46e-01 | 86.4% | 51.7% |
| 3405865 | 394.1.1.1 ↗ | few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 | 0.50 | 35.0 | 3.50e-01 | 94.9% | 71.7% |
| 3585752 | 394.1.1.1 ↗ | few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 | 0.50 | 35.0 | 3.73e-01 | 94.9% | 88.0% |
| 4952580 | 2003.6.1.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › Phos_pyr_kin | 0.50 | 35.0 | 2.47e-01 | 78.0% | 92.1% |
| 3739717 | 318.1.1.1 ↗ | a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 | 0.50 | 38.0 | 3.45e-01 | 84.7% | 81.2% |
| 4242523 | 318.1.1.1 ↗ | a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 | 0.50 | 38.0 | 3.51e-01 | 84.7% | 75.0% |
| 3399348 | 394.1.1.1 ↗ | few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 | 0.50 | 38.0 | 3.81e-01 | 98.3% | 81.7% |