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OP381185.1__UXM65495.1__X__00051

Bact-Vir

OP381185.1__UXM65495.1__X__00051

Identity

Accession:
OP381185 ↗
Kingdom:
phage

Quality

69.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Megaira_polyxenophila_phage_MAnkyphage_25.80

TaxID: 2981581

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 80-151
PDB
Domain cluster: representative
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5fmnA00 1.20.58.1000 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer 0.83 63.0 5.95e-01 84.7% 67.4%
4kb2A01 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.82 65.0 5.64e-01 86.1% 56.9%
2c5iT00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.72 51.0 4.68e-01 73.6% 57.4%
2wwwA03 1.10.287.130 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.67 49.0 5.15e-01 76.4% 86.2%
4hwhE00 1.20.58.120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain 0.64 44.0 4.18e-01 72.2% 59.1%
1vfrA00 3.40.109.10 Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase 0.61 42.0 2.93e-01 70.8% 26.7%
2qm8A03 1.10.287.130 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.61 45.0 4.71e-01 79.2% 86.2%
2p67A03 1.10.287.130 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.59 43.0 4.49e-01 76.4% 92.3%
ECOD (24)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3198228 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.89 82.0 5.75e-01 100.0% 35.6%
3720672 109.4.1.1591 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › U-box 0.88 80.0 5.26e-01 100.0% 26.1%
4323650 2004.1.1.45 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MutS_V 0.87 80.0 5.15e-01 100.0% 24.9%
3997665 622.4.1.0 ↗ alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related 0.84 73.0 6.16e-01 93.1% 61.1%
4433527 109.4.1.3336 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1, TPR_2, ANAPC3, CHIP_TPR_N 0.83 77.0 5.43e-01 100.0% 37.1%
4957875 605.1.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.81 75.0 6.17e-01 98.6% 62.5%
3991599 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.81 72.0 6.41e-01 97.2% 75.0%
4076608 109.4.1.924 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_CcmH_CycH 0.79 61.0 3.98e-01 81.9% 21.0%
3311806 3291.1.1.0 ↗ alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.78 70.0 5.50e-01 98.6% 50.3%
5073290 4307.1.1.0 ↗ alpha duplicates or obligate multimers › EB1 dimerisation domain-like › EB1 dimerisation domain-like › EB1 dimerisation domain-like 0.76 61.0 5.91e-01 97.2% 78.8%
None — 0.76 59.0 3.87e-01 86.1% 21.1%
3693339 3922.1.1.228 ↗ alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › LisH 0.74 64.0 4.79e-01 97.2% 38.3%
3756218 5001.1.1.1 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 0.74 68.0 4.28e-01 100.0% 83.7%
3731570 109.46.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Helical domain in TOPLESS related protein 2 (TPR2) › Helical domain in TOPLESS related protein 2 (TPR2) 0.74 63.0 4.04e-01 97.2% 20.0%
4405271 4207.1.1.0 ↗ alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › RNA polymerase II holoenzyme component SRB7 (MED21) 0.73 62.0 4.88e-01 97.2% 44.5%
3257726 192.15.1.2 ↗ alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › Mod_r 0.73 56.0 5.23e-01 83.3% 86.7%
4148347 101.1.1.26 ↗ alpha arrays › HTH › HTH › Three-helical HTH › UPF0122 0.73 52.0 4.53e-01 73.6% 51.9%
4008053 4168.1.1.7 ↗ alpha duplicates or obligate multimers › HAMP domain › HAMP domain › HAMP domain › PF26769 0.70 61.0 4.73e-01 100.0% 46.1%
3997555 192.15.1.2 ↗ alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › Mod_r 0.69 51.0 4.62e-01 79.2% 57.9%
3769584 4146.1.1.4 ↗ alpha bundles › YqgQ-like › YqgQ-like › YqgQ-like › FAM216B 0.68 53.0 5.16e-01 84.7% 78.8%
3515411 3877.1.1.0 ↗ alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC 0.64 47.0 3.41e-01 84.7% 27.3%
3663440 109.4.1.359 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Exo70_C 0.64 49.0 2.92e-01 87.5% 10.8%
None — 0.63 55.0 5.04e-01 98.6% 76.8%
4209030 4336.1.1.1 ↗ alpha duplicates or obligate multimers › YheA/YmcA-like › YheA/YmcA-like › YheA/YmcA-like › Com_YlbF 0.57 43.0 3.70e-01 80.6% 82.5%