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OP434449.1__UYL87143.1__SEA_OSCARSO_22__00022
Bact-VirOP434449.1__UYL87143.1__SEA_OSCARSO_22__00022
Identity
- Accession:
- OP434449 ↗
- Kingdom:
- phage
Quality
63.7
mean pLDDT
Taxonomy
TaxID: 2985324
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 13-65
Domain cluster:
representative
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3kl0A02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.66 | 54.0 | 3.46e-01 | 96.2% | 41.7% |
| 1q0qA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.65 | 52.0 | 3.81e-01 | 90.6% | 98.7% |
| 6lydA01 | 3.40.470.10 | Alpha Beta › 3-Layer(aba) Sandwich › Uracil-DNA Glycosylase, subunit E › Uracil-DNA glycosylase-like domain | 0.65 | 51.0 | 3.39e-01 | 92.5% | 71.3% |
| 4jn7A02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.64 | 50.0 | 3.26e-01 | 92.5% | 33.3% |
| 6wjaA02 | 3.90.25.10 | Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 | 0.61 | 43.0 | 3.64e-01 | 79.2% | 54.8% |
| 3i4kA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.61 | 49.0 | 3.22e-01 | 94.3% | 29.8% |
| 7o71E01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.60 | 46.0 | 2.96e-01 | 92.5% | 16.2% |
| 2zadA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.59 | 48.0 | 3.27e-01 | 96.2% | 32.2% |
| 3gg7A00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.59 | 47.0 | 3.15e-01 | 94.3% | 58.4% |
| 4wv3B01 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.59 | 49.0 | 2.96e-01 | 100.0% | 17.5% |
| 1vwxO01 | 3.90.1180.10 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L13p; Chain: A; › Ribosomal protein L13 | 0.58 | 44.0 | 3.41e-01 | 92.5% | 70.1% |
| 3b8iC00 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.57 | 42.0 | 2.81e-01 | 88.7% | 55.4% |
| 3w20A00 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.57 | 47.0 | 3.09e-01 | 96.2% | 88.1% |
| 7arcP01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 43.0 | 2.88e-01 | 92.5% | 19.6% |
| 4k9qA03 | 3.40.50.970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains | 0.56 | 44.0 | 3.18e-01 | 98.1% | 43.5% |
| 3otxB01 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.55 | 46.0 | 2.99e-01 | 100.0% | 65.2% |
| 3tkaA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.55 | 46.0 | 3.28e-01 | 100.0% | 57.6% |
| 2ynmD03 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.55 | 45.0 | 3.29e-01 | 100.0% | 49.7% |
| 7pd2B01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.55 | 43.0 | 2.73e-01 | 96.2% | 79.6% |
| 2xdqB04 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.54 | 44.0 | 3.81e-01 | 100.0% | 94.7% |
| 6jixA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.54 | 44.0 | 2.88e-01 | 98.1% | 42.6% |
| 3ggdA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 39.0 | 2.72e-01 | 88.7% | 21.0% |
| 3ix9A00 | 3.40.430.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A | 0.53 | 43.0 | 3.18e-01 | 98.1% | 92.8% |
| 3ewiB00 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.53 | 41.0 | 3.14e-01 | 96.2% | 70.9% |
| 5nclA02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.52 | 38.0 | 2.57e-01 | 79.2% | 79.2% |
| 1sezA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.52 | 38.0 | 2.86e-01 | 88.7% | 30.0% |
| 8k1fC01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 41.0 | 2.99e-01 | 100.0% | 50.0% |
| 6hqvA05 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 39.0 | 2.86e-01 | 92.5% | 29.4% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4067926 | 7588.1.1.1 ↗ | a/b three-layered sandwiches › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › LYTB | 0.71 | 48.0 | 4.03e-01 | 71.7% | 47.4% |
| 3925777 | 2496.1.1.2 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS | 0.66 | 50.0 | 3.56e-01 | 86.8% | 68.0% |
| 4647639 | 2003.1.1.8 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › G6PD_N | 0.64 | 50.0 | 3.81e-01 | 90.6% | 95.0% |
| 5073126 | 327.5.1.9 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding | 0.63 | 51.0 | 3.13e-01 | 96.2% | 21.6% |
| 4494002 | 2003.1.1.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase | 0.62 | 50.0 | 3.95e-01 | 92.5% | 40.8% |
| 5049384 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.62 | 49.0 | 3.21e-01 | 92.5% | 30.2% |
| 3273090 | 2003.1.1.39 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Sacchrp_dh_NADP | 0.61 | 47.0 | 3.38e-01 | 90.6% | 65.4% |
| 4973771 | 2007.1.14.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › Oxidored_nitro | 0.61 | 52.0 | 3.61e-01 | 100.0% | 48.9% |
| None | — | 0.60 | 49.0 | 3.09e-01 | 100.0% | 20.9% | |
| 3478648 | 207.1.1.134 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_6, DUF7885 | 0.59 | 45.0 | 3.61e-01 | 88.7% | 65.6% |
| 4078388 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.59 | 50.0 | 3.59e-01 | 100.0% | 40.6% |
| 5038255 | 2003.1.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short | 0.59 | 46.0 | 3.11e-01 | 92.5% | 21.7% |
| 3318087 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.59 | 48.0 | 3.50e-01 | 96.2% | 55.8% |
| None | — | 0.58 | 48.0 | 3.26e-01 | 100.0% | 55.2% | |
| None | — | 0.58 | 48.0 | 3.26e-01 | 100.0% | 55.2% | |
| 4875207 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.58 | 46.0 | 3.52e-01 | 98.1% | 50.0% |
| 3569070 | 2007.1.3.37 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Mut7-C | 0.58 | 46.0 | 3.47e-01 | 100.0% | 38.2% |
| 3250680 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.58 | 46.0 | 3.27e-01 | 96.2% | 38.5% |
| 4535746 | 2007.1.14.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › Oxidored_nitro | 0.58 | 47.0 | 3.39e-01 | 100.0% | 40.0% |
| 4444238 | 2003.1.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short | 0.57 | 43.0 | 2.84e-01 | 92.5% | 20.5% |
| 4998267 | 2484.1.1.16 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_HII | 0.57 | 46.0 | 3.26e-01 | 100.0% | 67.0% |
| 5076147 | 2002.1.1.44 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TatD_DNase | 0.57 | 44.0 | 2.96e-01 | 94.3% | 48.8% |
| 5009714 | 7584.1.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › AMP-binding | 0.56 | 47.0 | 3.40e-01 | 100.0% | 39.4% |
| 3962432 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.56 | 45.0 | 3.39e-01 | 96.2% | 46.0% |
| 3725701 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.55 | 44.0 | 3.13e-01 | 98.1% | 36.5% |
| None | — | 0.54 | 43.0 | 2.70e-01 | 96.2% | 64.9% | |
| 4957149 | 7512.1.1.30 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 | 0.53 | 44.0 | 3.06e-01 | 100.0% | 77.6% |
| 4458401 | 375.1.1.17 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › tRNA-synt_1f | 0.52 | 41.0 | 2.78e-01 | 100.0% | 87.3% |
| 4951433 | 2007.1.14.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › Oxidored_nitro | 0.50 | 40.0 | 3.14e-01 | 100.0% | 53.6% |