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OP434449.1__UYL87159.1__SEA_OSCARSO_38__00038
Bact-VirOP434449.1__UYL87159.1__SEA_OSCARSO_38__00038
Identity
- Accession:
- OP434449 ↗
- Kingdom:
- phage
Quality
56.5
mean pLDDT
Taxonomy
TaxID: 2985324
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-66
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1sg2A00 | 3.30.910.20 | Alpha Beta › 2-Layer Sandwich › Protein Binding, DinI Protein; Chain A › Skp domain | 0.76 | 63.0 | 4.87e-01 | 93.7% | 66.0% |
| 4r42A01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.75 | 57.0 | 4.06e-01 | 82.5% | 75.4% |
| 4fd4A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.74 | 46.0 | 3.17e-01 | 71.4% | 18.9% |
| 8d7hD01 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.74 | 57.0 | 4.17e-01 | 84.1% | 41.6% |
| 1zpyA00 | 6.10.140.1960 | Special › Helix non-globular › Helix Hairpins › | 0.70 | 53.0 | 4.73e-01 | 82.5% | 58.2% |
| 4l0rB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.67 | 54.0 | 5.21e-01 | 92.1% | 80.8% |
| 1xzzA00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.64 | 51.0 | 3.47e-01 | 85.7% | 73.6% |
| 4nooB00 | 1.10.8.1160 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.63 | 47.0 | 4.14e-01 | 79.4% | 52.6% |
| 1vkeB00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.63 | 48.0 | 4.08e-01 | 82.5% | 70.3% |
| 3qkaE02 | 1.10.287.2460 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.62 | 40.0 | 4.47e-01 | 71.4% | 97.7% |
ECOD (32)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4590370 | 5086.1.1.20 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › NYD-SP28 | 0.85 | 74.0 | 5.30e-01 | 95.2% | 37.1% |
| 3299977 | 109.4.1.628 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Sec7-like_HUS | 0.84 | 60.0 | 3.25e-01 | 74.6% | 9.1% |
| 3989094 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.82 | 63.0 | 6.07e-01 | 81.0% | 74.3% |
| 3412881 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.82 | 59.0 | 5.37e-01 | 76.2% | 58.7% |
| 3593590 | 5086.1.1.20 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › NYD-SP28 | 0.81 | 69.0 | 5.08e-01 | 93.7% | 45.0% |
| 4950607 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.79 | 68.0 | 4.80e-01 | 93.7% | 31.6% |
| 4950585 | 632.8.1.34 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 › HisKA | 0.79 | 66.0 | 6.34e-01 | 93.7% | 82.2% |
| 3170639 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.78 | 65.0 | 5.90e-01 | 92.1% | 82.4% |
| 4954852 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.78 | 66.0 | 4.79e-01 | 95.2% | 36.4% |
| 3878682 | 11.12.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD | 0.77 | 58.0 | 3.96e-01 | 81.0% | 23.8% |
| 3577937 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.76 | 65.0 | 5.39e-01 | 98.4% | 84.3% |
| 3409567 | 3755.3.1.324 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF725 | 0.73 | 60.0 | 4.46e-01 | 92.1% | 53.9% |
| 3733319 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.73 | 61.0 | 5.04e-01 | 93.7% | 93.9% |
| 5048590 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.73 | 57.0 | 4.78e-01 | 85.7% | 58.2% |
| 3219646 | 3826.1.1.0 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) | 0.73 | 54.0 | 5.78e-01 | 79.4% | 90.9% |
| 4016578 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.73 | 62.0 | 5.22e-01 | 93.7% | 89.5% |
| 3909706 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.72 | 56.0 | 5.10e-01 | 87.3% | 62.4% |
| 3514842 | 603.1.1.3 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › V-SNARE | 0.72 | 59.0 | 4.94e-01 | 88.9% | 82.9% |
| 3216709 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.71 | 55.0 | 4.92e-01 | 84.1% | 97.8% |
| 4115372 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.71 | 55.0 | 4.61e-01 | 85.7% | 58.2% |
| 4075707 | 3711.1.1.0 ↗ | alpha bundles › LTXXQ motif family protein › LTXXQ motif family protein › LTXXQ motif family protein | 0.70 | 57.0 | 5.03e-01 | 90.5% | 63.2% |
| 3504474 | 192.5.1.1 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › HR1 | 0.70 | 55.0 | 4.83e-01 | 88.9% | 61.0% |
| 4034237 | 5055.1.1.0 ↗ | extended segments › Small-conductance potassium channel › Small-conductance potassium channel › Small-conductance potassium channel | 0.70 | 59.0 | 4.98e-01 | 100.0% | 73.9% |
| 3805872 | 4095.1.1.1 ↗ | alpha bundles › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › DNA_ligase_A_N | 0.70 | 48.0 | 3.86e-01 | 71.4% | 38.4% |
| 3404638 | 603.1.1.3 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › V-SNARE | 0.69 | 54.0 | 4.73e-01 | 88.9% | 87.0% |
| 4449117 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.69 | 53.0 | 4.95e-01 | 87.3% | 66.3% |
| 3414399 | 5086.1.1.106 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › DUF725 | 0.68 | 59.0 | 4.28e-01 | 95.2% | 64.7% |
| 4041347 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.68 | 61.0 | 5.04e-01 | 100.0% | 63.6% |
| 3492118 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.67 | 55.0 | 3.72e-01 | 95.2% | 33.1% |
| 3550436 | 192.7.1.0 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm | 0.66 | 53.0 | 4.62e-01 | 93.7% | 57.7% |
| 4979981 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.65 | 59.0 | 4.86e-01 | 100.0% | 62.7% |
| 5081365 | 601.33.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › CHAD domain › CHAD domain | 0.64 | 55.0 | 4.30e-01 | 100.0% | 57.2% |
D2
high
residues 102-178