←Back to structures
OP434452.1__UYL87445.1__SEA_PUREGLOBE5_82__00082
Bact-VirOP434452.1__UYL87445.1__SEA_PUREGLOBE5_82__00082
Identity
- Accession:
- OP434452 ↗
- Kingdom:
- phage
Quality
86.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-67
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4x9tA01 | 3.40.190.150 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Bordetella uptake gene, domain 1 | 0.66 | 48.0 | 3.57e-01 | 78.1% | 76.0% |
| 2e6wA00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.61 | 46.0 | 4.10e-01 | 84.4% | 95.8% |
| 2bbrA01 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.59 | 47.0 | 4.33e-01 | 92.2% | 76.4% |
| 2cpdA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.58 | 46.0 | 4.46e-01 | 90.6% | 88.0% |
| 4jhyA00 | 3.30.530.80 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › | 0.55 | 42.0 | 3.32e-01 | 87.5% | 98.1% |
| 4pxdA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 46.0 | 3.87e-01 | 96.9% | 95.7% |
| 1x9zA01 | 3.30.1540.20 | Alpha Beta › 2-Layer Sandwich › formyl-coa transferase, domain 3 › MutL, C-terminal domain, dimerisation subdomain | 0.55 | 41.0 | 3.75e-01 | 84.4% | 84.9% |
| 2ap1A02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.54 | 40.0 | 3.12e-01 | 84.4% | 81.9% |
| 2sasA00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.54 | 44.0 | 3.30e-01 | 96.9% | 97.3% |
| 2hkeA02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.53 | 44.0 | 3.28e-01 | 100.0% | 96.4% |
| 7wboA01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.53 | 41.0 | 3.23e-01 | 96.9% | 96.7% |
| 3i3wA04 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.53 | 41.0 | 3.87e-01 | 84.4% | 90.9% |
| 1vqyB01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 44.0 | 3.97e-01 | 100.0% | 97.9% |
| 3gmgA00 | 3.30.70.1880 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Protein of unknown function DUF881 | 0.52 | 43.0 | 3.48e-01 | 100.0% | 73.4% |
| 2g9oA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 40.0 | 3.83e-01 | 93.8% | 94.8% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3287878 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.67 | 48.0 | 3.09e-01 | 100.0% | 15.8% |
| 4289158 | 108.1.1.97 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_7 | 0.62 | 48.0 | 4.10e-01 | 85.9% | 89.1% |
| 3911057 | 108.1.1.97 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_7 | 0.62 | 46.0 | 4.16e-01 | 84.4% | 90.5% |
| 3880513 | 108.1.1.107 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_7, EF-hand_8 | 0.61 | 45.0 | 3.37e-01 | 81.2% | 51.4% |
| 4146515 | 304.148.1.1 ↗ | a+b two layers › Alpha-beta plaits › Uncharacterized protein Rv1825/MT1873 › Uncharacterized protein Rv1825/MT1873 › DUF881 | 0.60 | 46.0 | 3.73e-01 | 85.9% | 76.3% |
| 3908024 | 108.1.1.96 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_6, EF-hand_7 | 0.60 | 43.0 | 4.02e-01 | 79.7% | 98.8% |
| 3902433 | 108.1.1.101 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5, EF-hand_7, EF-hand_8 | 0.59 | 46.0 | 3.26e-01 | 87.5% | 42.3% |
| 3673160 | 3265.1.1.1 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › GIDA_C_1st | 0.59 | 48.0 | 4.29e-01 | 93.8% | 82.1% |
| 4991735 | 210.1.3.0 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases | 0.57 | 47.0 | 3.34e-01 | 100.0% | 57.0% |
| 4170381 | 304.56.1.2 ↗ | a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like › CRISPR_Cas2 | 0.56 | 44.0 | 3.92e-01 | 87.5% | 58.5% |
| 4113263 | 304.8.1.48 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › MNHE | 0.55 | 42.0 | 4.02e-01 | 84.4% | 85.3% |
| 5060746 | 4159.1.1.0 ↗ | alpha arrays › SP0561-like › SP0561-like › SP0561-like | 0.55 | 42.0 | 4.22e-01 | 82.8% | 98.5% |
| 3929094 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.55 | 39.0 | 4.00e-01 | 76.6% | 80.0% |
| 3908842 | 148.1.1.4 ↗ | alpha arrays › Histone-like › Histone-related › Histone › CBFD_NFYB_HMF | 0.54 | 38.0 | 3.34e-01 | 82.8% | 46.2% |
| 2892078 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.54 | 40.0 | 3.61e-01 | 81.2% | 96.8% |
| 4990267 | 316.1.1.39 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › DUF2204 | 0.54 | 40.0 | 3.00e-01 | 84.4% | 46.8% |
| 4660106 | 4342.1.1.1 ↗ | alpha complex topology › Tex N-terminal region-like › Tex N-terminal region-like › Tex N-terminal region-like › Tex_central_region | 0.54 | 45.0 | 3.15e-01 | 100.0% | 27.6% |
| 4029214 | 2002.1.1.126 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM,Radical_SAM_C | 0.53 | 39.0 | 2.50e-01 | 79.7% | 21.1% |
| 3223597 | 101.1.17.0 ↗ | alpha arrays › HTH › HTH › FF domain | 0.52 | 35.0 | 3.49e-01 | 76.6% | 65.7% |
| 3291316 | 225.1.1.3 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c | 0.52 | 38.0 | 2.99e-01 | 81.2% | 58.7% |
| 3474514 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.52 | 41.0 | 3.55e-01 | 89.1% | 83.8% |
| 3255165 | 213.1.1.57 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › BCCIP | 0.50 | 41.0 | 2.81e-01 | 90.6% | 70.2% |
| 5049314 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.50 | 43.0 | 3.27e-01 | 100.0% | 100.0% |