Back to structures

OP441381.1__UZV39483.1__FBKp18_035__00035

Bact-Vir

OP441381.1__UZV39483.1__FBKp18_035__00035

Identity

Accession:
OP441381 ↗
Kingdom:
phage

Quality

85.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-39
PDB
Domain cluster: representative
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3kk7A03 3.30.160.840 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.71 49.0 4.24e-01 89.7% 46.8%
2fggA01 3.30.160.240 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Rv1738 0.62 51.0 4.14e-01 92.3% 64.0%
5ov3B01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.61 49.0 2.96e-01 94.9% 17.5%
2wl1A00 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.60 49.0 3.16e-01 100.0% 19.4%
2fk5A00 3.40.225.10 Alpha Beta › 3-Layer(aba) Sandwich › L-fuculose-1-phosphate Aldolase › Class II aldolase/adducin N-terminal domain 0.53 39.0 2.75e-01 100.0% 57.4%
2opiA00 3.40.225.10 Alpha Beta › 3-Layer(aba) Sandwich › L-fuculose-1-phosphate Aldolase › Class II aldolase/adducin N-terminal domain 0.53 39.0 2.70e-01 100.0% 57.4%
6bogA02 2.30.30.930 Mainly Beta › Roll › SH3 type barrels. › 0.52 41.0 3.61e-01 89.7% 78.3%
4cckA03 3.90.930.40 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › 0.52 40.0 2.92e-01 100.0% 32.2%
ECOD (12)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3740511 2.1.1.89 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Dis3l2_C_term 0.74 49.0 3.76e-01 84.6% 30.0%
3684267 5.1.10.15 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed › RPE65 0.62 48.0 3.37e-01 87.2% 26.2%
3791851 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.61 51.0 3.54e-01 100.0% 66.9%
4962879 101.1.17.0 alpha arrays › HTH › HTH › FF domain 0.61 51.0 3.47e-01 100.0% 37.4%
3621125 3209.1.1.1 a+b two layers › RPL28 › RPL28 › RPL28 › Ribosomal_L28e 0.59 47.0 3.41e-01 97.4% 44.4%
3270202 3209.1.1.1 a+b two layers › RPL28 › RPL28 › RPL28 › Ribosomal_L28e 0.59 48.0 3.06e-01 97.4% 26.7%
3640810 314.1.1.12 a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › LplA-B_cat 0.57 46.0 2.83e-01 100.0% 35.4%
4938040 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 42.0 3.01e-01 97.4% 29.3%
4991184 281.1.1.1 a+b three layers › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › Aldolase_II 0.55 41.0 2.88e-01 100.0% 63.3%
3333660 2003.1.2.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.54 44.0 3.07e-01 100.0% 23.7%
4982622 281.1.1.1 a+b three layers › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › Aldolase_II 0.54 40.0 2.82e-01 100.0% 60.1%
1291229 101.1.2.194 alpha arrays › HTH › HTH › winged helix domain › RIOX1_C_WH 0.52 40.0 2.96e-01 100.0% 33.8%