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OP455937.1__WAX23812.1__X__00020

Bact-Vir

OP455937.1__WAX23812.1__X__00020

Identity

Accession:
OP455937 ↗
Kingdom:
phage

Quality

88.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Aliceevansviridae› Latilactobacillus_phage_TMW_1.1393_P1

TaxID: 2995631

Cluster

View cluster (8 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-55
PDB
Domain cluster: rep: MN689530.1__QGT53599.1__CHPC974_001264__00045__D5-60
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4myjA04 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.63 45.0 3.34e-01 100.0% 31.0%
1s6lA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 44.0 4.54e-01 92.6% 76.9%
1m1hA02 2.60.320.10 Mainly Beta › Sandwich › mini-chromosome maintenance (MCM) complex, domain 2 › N-utilization substance G protein NusG, insert domain 0.61 52.0 4.58e-01 100.0% 96.3%
3pfiA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 46.0 4.18e-01 92.6% 64.4%
1uxdA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.58 40.0 3.97e-01 74.1% 86.4%
5c8qB02 3.10.350.10 Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain 0.56 39.0 4.16e-01 90.7% 84.8%
3prbA01 3.10.50.40 Alpha Beta › Roll › Chitinase A; domain 3 › 0.56 46.0 3.84e-01 100.0% 95.2%
1v8hA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 42.0 3.38e-01 100.0% 43.4%
4b8vA03 3.10.350.10 Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain 0.53 41.0 4.29e-01 83.3% 91.8%
3wnoA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 43.0 3.51e-01 100.0% 49.0%
3h5tA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.52 42.0 4.52e-01 98.1% 100.0%
6grqA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 41.0 3.51e-01 100.0% 53.4%
1d1jB00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.52 37.0 2.97e-01 83.3% 66.9%
2mtzA01 3.10.350.10 Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain 0.51 38.0 3.90e-01 83.3% 88.0%
ECOD (27)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3587703 101.1.14.0 ↗ alpha arrays › HTH › HTH › DNA-binding domain of intron-encoded endonucleases 0.80 68.0 7.10e-01 96.3% 100.0%
4384880 101.1.14.3 ↗ alpha arrays › HTH › HTH › DNA-binding domain of intron-encoded endonucleases › NUMOD1 0.77 69.0 5.88e-01 98.1% 62.4%
4414927 101.1.14.3 ↗ alpha arrays › HTH › HTH › DNA-binding domain of intron-encoded endonucleases › NUMOD1 0.74 65.0 6.05e-01 100.0% 79.7%
3171408 101.1.14.3 ↗ alpha arrays › HTH › HTH › DNA-binding domain of intron-encoded endonucleases › NUMOD1 0.73 61.0 6.28e-01 94.4% 100.0%
3457416 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.65 43.0 4.17e-01 90.7% 61.7%
3529267 268.1.1.0 ↗ a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related 0.64 37.0 4.27e-01 94.4% 85.7%
1310621 10.12.1.1 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding 0.64 46.0 3.49e-01 100.0% 34.2%
3970704 101.15.1.0 ↗ alpha arrays › HTH › LysM domain › LysM domain 0.63 42.0 3.99e-01 90.7% 58.5%
5004272 101.1.9.41 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › ORF6N 0.63 40.0 4.07e-01 75.9% 65.5%
3720958 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.62 40.0 4.19e-01 90.7% 72.0%
4555777 101.15.1.0 ↗ alpha arrays › HTH › LysM domain › LysM domain 0.62 41.0 3.77e-01 90.7% 52.9%
3230171 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.61 42.0 4.35e-01 90.7% 78.0%
3426433 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.60 41.0 4.02e-01 90.7% 65.0%
3458171 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.60 41.0 3.90e-01 90.7% 60.0%
3636417 101.15.1.0 ↗ alpha arrays › HTH › LysM domain › LysM domain 0.59 43.0 4.42e-01 88.9% 79.2%
3337080 101.15.1.5 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM3_LYK4_5 0.59 41.0 3.96e-01 90.7% 65.0%
3925474 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.58 40.0 4.13e-01 92.6% 78.0%
2047861 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.58 40.0 3.94e-01 90.7% 67.2%
3631347 2004.1.1.5 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran 0.58 45.0 2.70e-01 88.9% 11.6%
4022446 101.15.1.0 ↗ alpha arrays › HTH › LysM domain › LysM domain 0.54 41.0 4.16e-01 90.7% 81.8%
4492966 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.53 41.0 4.15e-01 85.2% 81.8%
3324708 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.53 41.0 3.99e-01 83.3% 75.0%
4149501 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.53 40.0 4.19e-01 83.3% 92.0%
3320955 101.15.1.5 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM3_LYK4_5 0.53 41.0 3.83e-01 83.3% 69.2%
1758716 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.53 40.0 4.16e-01 83.3% 86.5%
2074716 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.52 40.0 4.10e-01 81.5% 88.2%
3946658 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.51 39.0 3.61e-01 83.3% 65.7%