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OP455940.1__WAX23980.1__X__00015

Bact-Vir

OP455940.1__WAX23980.1__X__00015

Identity

Accession:
OP455940 ↗
Kingdom:
phage

Quality

67.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Latilactobacillus_phage_TMW_1.46_P2

TaxID: 2995634

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 43-98
PDB
Domain cluster: representative
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5dukB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 58.0 5.44e-01 94.6% 77.6%
1j5yA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 55.0 5.26e-01 92.9% 79.7%
3q9vA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 50.0 4.28e-01 89.3% 72.4%
6v88A00 3.30.710.10 Alpha Beta › 2-Layer Sandwich › Potassium Channel Kv1.1; Chain A › Potassium Channel Kv1.1; Chain A 0.62 50.0 4.03e-01 92.9% 81.0%
2dk8A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 48.0 4.69e-01 96.4% 100.0%
3ccgA00 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.55 41.0 2.99e-01 87.5% 56.6%
3a8tA02 1.10.287.890 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 0.55 43.0 3.52e-01 98.2% 45.0%
2yhgA01 3.90.245.10 Alpha Beta › Alpha-Beta Complex › Inosine-uridine Nucleoside N-ribohydrolase; Chain A › Ribonucleoside hydrolase-like 0.54 45.0 2.94e-01 100.0% 33.2%
1lujB01 1.10.10.490 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Beta-catenin-interacting ICAT 0.54 42.0 4.34e-01 94.6% 94.3%
3lysA00 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.52 42.0 3.57e-01 96.4% 63.8%
4n21E00 1.10.287.210 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.52 36.0 2.79e-01 80.4% 33.1%
ECOD (10)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5039985 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.69 54.0 5.23e-01 87.5% 81.5%
3469087 101.1.2.386 ↗ alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.63 49.0 4.63e-01 87.5% 97.1%
4961017 101.1.1.552 ↗ alpha arrays › HTH › HTH › Three-helical HTH › DUF5806 0.62 50.0 4.66e-01 94.6% 94.7%
3753542 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.60 46.0 4.81e-01 85.7% 94.0%
3739880 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.60 46.0 4.60e-01 87.5% 81.7%
3945040 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.57 42.0 4.26e-01 92.9% 81.8%
3691507 604.12.1.24 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › DUF6604 0.54 37.0 3.01e-01 73.2% 73.9%
4966860 150.1.1.1 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Ferritin 0.53 37.0 2.94e-01 76.8% 94.6%
3730435 630.1.1.0 ↗ a+b complex topology › RuBisCo LSMT C-terminal, substrate-binding domain › RuBisCo LSMT C-terminal, substrate-binding domain › RuBisCo LSMT C-terminal, substrate-binding domain 0.52 42.0 3.10e-01 92.9% 81.9%
4408580 192.6.1.0 ↗ alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain 0.50 33.0 3.51e-01 71.4% 84.4%
D2 medium residues 193-273
PDB
D3 medium residues 308-365
PDB