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OP455940.1__WAX23995.1__X__00030

Bact-Vir

OP455940.1__WAX23995.1__X__00030

Identity

Accession:
OP455940 ↗
Kingdom:
phage

Quality

80.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-69
PDB
Domain cluster: representative
CATH (52)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1zpyA00 6.10.140.1960 Special › Helix non-globular › Helix Hairpins › 0.79 53.0 4.58e-01 90.6% 48.4%
2ic6A00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.79 62.0 5.95e-01 92.2% 74.6%
5i1uA00 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.76 61.0 3.86e-01 84.4% 35.7%
2gtsA00 1.10.287.850 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain 0.76 58.0 5.42e-01 90.6% 67.5%
2yn7A00 1.10.3160.10 Mainly Alpha › Orthogonal Bundle › Bbcrasp-1 › Bbcrasp-1 0.75 64.0 4.30e-01 95.3% 27.1%
3t0yA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 49.0 5.03e-01 71.9% 75.0%
1l0oC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 34.0 3.65e-01 90.6% 50.9%
3kb9A00 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.71 60.0 3.76e-01 93.8% 34.7%
2amxB00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.70 52.0 3.22e-01 78.1% 16.9%
1rr7A02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.70 43.0 4.86e-01 70.3% 83.3%
2b5dX01 3.20.110.10 Alpha Beta › Alpha-Beta Barrel › 7-stranded beta/alpha barrel › Glycoside hydrolase 38, N terminal domain 0.70 56.0 3.38e-01 85.9% 22.8%
4zo4A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.69 51.0 3.50e-01 76.6% 82.1%
2w7nA00 1.10.10.2690 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.69 50.0 4.47e-01 87.5% 53.2%
4pxoA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.69 50.0 4.00e-01 78.1% 41.2%
1jkwA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.69 51.0 3.74e-01 79.7% 55.1%
8gr7A01 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.69 57.0 3.58e-01 89.1% 35.2%
4f4cA01 1.20.1560.10 Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain 0.68 61.0 3.43e-01 100.0% 65.2%
4dylA02 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.68 58.0 5.05e-01 92.2% 67.0%
1fi2A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.66 46.0 3.17e-01 71.9% 57.7%
4rocA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.66 46.0 3.96e-01 73.4% 67.0%
3f51C00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.65 54.0 4.82e-01 90.6% 93.3%
1aisB02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.65 45.0 4.02e-01 73.4% 70.2%
5c17A00 3.30.450.410 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.64 56.0 3.99e-01 100.0% 78.2%
7s0rB01 1.20.81.20 Mainly Alpha › Up-down Bundle › Receptor-associated Protein › 0.64 49.0 4.59e-01 79.7% 86.8%
4krdB00 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.64 46.0 3.34e-01 79.7% 26.3%
1c9bA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.63 43.0 3.84e-01 73.4% 67.0%
2nn4A00 1.10.287.760 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YqgQ-like 0.62 43.0 4.37e-01 71.9% 93.5%
3tqnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 45.0 4.39e-01 78.1% 86.3%
1f45B00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.62 52.0 4.00e-01 90.6% 42.9%
3mc1A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.62 44.0 4.40e-01 75.0% 92.5%
2xvcA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 42.0 4.43e-01 71.9% 82.1%
1g3nC01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.62 48.0 3.95e-01 87.5% 45.8%
3broD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 45.0 3.58e-01 78.1% 51.5%
2d1hB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 46.0 4.08e-01 82.8% 72.4%
4bbrM00 1.10.472.170 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › 0.61 41.0 2.99e-01 70.3% 31.6%
1wu3I00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.61 48.0 3.59e-01 85.9% 55.3%
4od4A01 1.10.357.140 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › UbiA prenyltransferase 0.60 49.0 3.76e-01 90.6% 94.2%
4it4A02 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.60 51.0 4.64e-01 98.4% 91.2%
2jn6A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.59 39.0 3.58e-01 70.3% 50.6%
2wusS00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.59 41.0 3.86e-01 75.0% 96.3%
1j1vA00 1.10.1750.10 Mainly Alpha › Orthogonal Bundle › Chromosomal Replication Initiator Protein Dnaa; Chain: A; › DnaA protein, C-terminal DNA-binding domain 0.58 43.0 3.83e-01 79.7% 57.4%
3s2wG00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 46.0 3.66e-01 87.5% 65.4%
1ub9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 47.0 4.04e-01 89.1% 89.0%
7dvrA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 48.0 3.73e-01 93.8% 70.9%
3ecoB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 46.0 3.77e-01 93.8% 72.9%
1u8bA02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.56 40.0 4.14e-01 78.1% 83.6%
6f8hC00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.56 45.0 4.01e-01 90.6% 86.0%
8dtqA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.56 40.0 3.77e-01 78.1% 89.0%
2fa5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 45.0 3.53e-01 92.2% 62.6%
6oinA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 38.0 3.79e-01 76.6% 95.5%
3bpvA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 44.0 3.45e-01 92.2% 69.3%
6rnzA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.51 34.0 3.44e-01 70.3% 93.9%
ECOD (66)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4552002 3728.1.1.1 alpha superhelices › Surface cell antigen Sca2 helical repeats › Surface cell antigen Sca2 helical repeats › Surface cell antigen Sca2 helical repeats › Sca2 0.88 69.0 4.34e-01 92.2% 18.0%
4828003 310.2.1.0 a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF 0.77 71.0 5.67e-01 100.0% 93.4%
5027661 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.76 52.0 4.20e-01 70.3% 42.6%
4994316 101.1.10.3 alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.76 57.0 4.26e-01 87.5% 35.7%
4683324 101.1.1.26 alpha arrays › HTH › HTH › Three-helical HTH › UPF0122 0.75 55.0 4.51e-01 76.6% 82.7%
3587350 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.74 50.0 5.44e-01 70.3% 90.0%
3348367 109.4.1.1262 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_long 0.74 64.0 3.87e-01 96.9% 15.6%
3233890 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.72 57.0 5.69e-01 84.4% 90.8%
4133751 3728.1.1.1 alpha superhelices › Surface cell antigen Sca2 helical repeats › Surface cell antigen Sca2 helical repeats › Surface cell antigen Sca2 helical repeats › Sca2 0.72 61.0 3.83e-01 92.2% 26.4%
3639520 219.1.1.9 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C12 0.72 62.0 3.88e-01 93.8% 22.8%
4614033 101.1.2.66 alpha arrays › HTH › HTH › winged helix domain › Mga 0.72 53.0 4.98e-01 79.7% 81.2%
3100923 101.1.10.1 alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.71 53.0 3.95e-01 79.7% 35.9%
3586880 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.71 46.0 4.95e-01 73.4% 78.2%
4217329 4964.1.1.1 alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › DNA_pol_A 0.71 50.0 4.00e-01 73.4% 47.5%
4966030 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.71 51.0 5.30e-01 81.2% 82.8%
5005544 101.1.2.205 alpha arrays › HTH › HTH › winged helix domain › PF0610-like_N 0.70 49.0 4.85e-01 75.0% 72.9%
3987510 101.1.2.89 alpha arrays › HTH › HTH › winged helix domain › HTH_DeoR 0.70 49.0 5.23e-01 71.9% 98.2%
4961655 101.1.10.3 alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.70 52.0 4.57e-01 84.4% 53.7%
3588130 101.1.2.66 alpha arrays › HTH › HTH › winged helix domain › Mga 0.70 49.0 5.27e-01 75.0% 87.3%
3721781 101.1.10.3 alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.70 59.0 4.43e-01 96.9% 38.2%
3853936 101.1.10.2 alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N,Cyclin_C_2 0.69 51.0 3.41e-01 79.7% 37.3%
4058197 141.1.1.8 alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › Terpene_syn_C_2 0.68 57.0 3.68e-01 95.3% 42.5%
5021925 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 48.0 3.96e-01 73.4% 54.5%
3187803 101.1.2.57 alpha arrays › HTH › HTH › winged helix domain › EAP30 0.67 47.0 4.48e-01 73.4% 78.7%
4954539 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 45.0 5.06e-01 73.4% 90.0%
5025138 101.1.10.80 alpha arrays › HTH › HTH › Cyclin-like › Zn_Ribbon_TF 0.67 47.0 3.33e-01 73.4% 32.0%
3886097 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.67 46.0 4.44e-01 75.0% 62.7%
5025139 101.1.10.3 alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.67 45.0 4.00e-01 70.3% 68.4%
4503081 101.1.2.57 alpha arrays › HTH › HTH › winged helix domain › EAP30 0.66 49.0 4.79e-01 78.1% 90.0%
3840064 192.24.1.0 alpha bundles › Long alpha-hairpin › RPC62 helical hairpin domain › RPC62 helical hairpin domain 0.66 57.0 5.00e-01 95.3% 74.7%
4031617 101.1.2.112 alpha arrays › HTH › HTH › winged helix domain › FtsK_gamma 0.66 46.0 4.28e-01 71.9% 73.4%
3194347 101.1.10.3 alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.66 51.0 3.86e-01 84.4% 45.8%
4956629 101.1.10.3 alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.66 48.0 4.10e-01 79.7% 86.4%
4956384 3755.4.1.0 alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain 0.65 52.0 3.61e-01 84.4% 28.7%
5037673 101.1.10.3 alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.65 45.0 3.84e-01 73.4% 60.0%
4962267 101.1.10.3 alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.65 44.0 3.93e-01 70.3% 66.7%
5047333 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.64 44.0 3.95e-01 73.4% 51.1%
3374351 101.1.10.0 alpha arrays › HTH › HTH › Cyclin-like 0.64 44.0 4.76e-01 78.1% 94.0%
3668668 101.1.1.29 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 0.64 54.0 4.40e-01 96.9% 56.0%
5040337 101.1.2.673 alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N 0.63 44.0 3.95e-01 73.4% 65.6%
3693312 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.63 45.0 4.68e-01 76.6% 85.0%
3998880 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.63 48.0 4.26e-01 84.4% 72.6%
5073679 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.62 42.0 3.87e-01 70.3% 55.0%
4306568 4207.1.2.1 alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › MED7 hinge region › Med7 0.62 53.0 4.32e-01 95.3% 51.3%
4991639 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 45.0 4.23e-01 78.1% 76.2%
5039839 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.62 45.0 3.84e-01 78.1% 85.7%
3662896 101.1.1.411 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r2 0.61 49.0 3.92e-01 85.9% 48.8%
5039663 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.61 47.0 4.51e-01 90.6% 72.0%
4945513 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.61 44.0 3.17e-01 78.1% 77.6%
4026959 101.1.1.29 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 0.61 51.0 3.30e-01 95.3% 21.2%
3273891 101.1.10.0 alpha arrays › HTH › HTH › Cyclin-like 0.61 42.0 3.51e-01 73.4% 74.2%
5025028 101.1.10.3 alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.61 45.0 4.08e-01 82.8% 100.0%
3925845 109.4.1.192 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8 0.61 52.0 3.38e-01 100.0% 37.9%
3676572 142.1.1.3 alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 0.61 51.0 3.79e-01 95.3% 38.3%
4174198 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.61 44.0 3.85e-01 78.1% 55.0%
5006390 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.60 42.0 4.23e-01 73.4% 86.2%
4945048 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 42.0 4.49e-01 73.4% 87.3%
4926960 101.1.2.652 alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repr_C 0.60 48.0 3.75e-01 85.9% 66.9%
4399586 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 43.0 3.47e-01 76.6% 47.7%
4973758 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.60 41.0 4.18e-01 73.4% 85.9%
4962048 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.59 42.0 3.85e-01 78.1% 71.1%
3975658 101.1.1.58 alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.57 46.0 4.17e-01 92.2% 71.1%
3727621 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.57 47.0 4.46e-01 96.9% 82.5%
5028128 101.1.2.530 alpha arrays › HTH › HTH › winged helix domain › HVO_A0114 0.56 41.0 3.70e-01 78.1% 70.0%
4033641 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.55 47.0 3.70e-01 96.9% 62.9%
4476647 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.54 46.0 3.57e-01 93.8% 65.0%