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OP484857.1__UYE95760.1__HAAEEKHM_00040__00040
Bact-VirOP484857.1__UYE95760.1__HAAEEKHM_00040__00040
Identity
- Accession:
- OP484857 ↗
- Kingdom:
- phage
Quality
89.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-53
Domain cluster:
representative
CATH (37)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3b0bB00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.77 | 62.0 | 5.02e-01 | 90.2% | 46.4% |
| 4m85C00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.76 | 62.0 | 4.20e-01 | 90.2% | 45.4% |
| 3ermB00 | 1.10.10.710 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PSPTO_1197 like | 0.76 | 63.0 | 5.89e-01 | 94.1% | 92.2% |
| 4ixjA01 | 3.30.1300.80 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › | 0.75 | 61.0 | 5.30e-01 | 88.2% | 67.5% |
| 1ad6A00 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.74 | 66.0 | 4.44e-01 | 98.0% | 50.8% |
| 7bqiA01 | 1.20.58.900 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › RUN domain | 0.74 | 56.0 | 3.93e-01 | 80.4% | 27.8% |
| 2of7A02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.72 | 60.0 | 4.37e-01 | 92.2% | 35.7% |
| 3ufeA02 | 1.20.58.1950 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.72 | 51.0 | 5.07e-01 | 82.4% | 73.6% |
| 2qvwA04 | 1.10.1520.10 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain | 0.71 | 62.0 | 4.47e-01 | 98.0% | 70.3% |
| 1pp0B00 | 3.40.198.10 | Alpha Beta › 3-Layer(aba) Sandwich › Delta-endotoxin CytB › Delta-endotoxin CytB-like | 0.71 | 54.0 | 3.67e-01 | 84.3% | 33.5% |
| 2e62A01 | 6.10.140.420 | Special › Helix non-globular › Helix Hairpins › | 0.70 | 56.0 | 5.59e-01 | 90.2% | 90.4% |
| 2y39A00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.70 | 55.0 | 4.20e-01 | 84.3% | 39.1% |
| 4ex8A00 | 3.40.1790.10 | Alpha Beta › 3-Layer(aba) Sandwich › Indigoidine synthase fold › Indigoidine synthase domain | 0.70 | 54.0 | 3.36e-01 | 90.2% | 15.0% |
| 1knzA01 | 6.10.280.20 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Rotavirus non-structural protein NSP3, N-terminal domain | 0.69 | 52.0 | 4.31e-01 | 90.2% | 44.1% |
| 2ymmA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.68 | 53.0 | 4.82e-01 | 90.2% | 64.4% |
| 3tndA00 | 3.40.50.1010 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease | 0.68 | 53.0 | 4.06e-01 | 92.2% | 43.9% |
| 2w43A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.67 | 48.0 | 4.75e-01 | 82.4% | 71.9% |
| 4k7cA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.67 | 58.0 | 3.46e-01 | 100.0% | 89.1% |
| 4evxA00 | 1.10.1740.240 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › | 0.66 | 53.0 | 4.29e-01 | 90.2% | 46.4% |
| 4cthA02 | 1.10.1380.10 | Mainly Alpha › Orthogonal Bundle › Neutral endopeptidase; domain 2 › Neutral endopeptidase , domain2 | 0.66 | 51.0 | 3.17e-01 | 96.1% | 36.1% |
| 2bnlC00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.64 | 51.0 | 3.94e-01 | 96.1% | 49.3% |
| 3vm9A02 | 6.10.140.2110 | Special › Helix non-globular › Helix Hairpins › | 0.63 | 50.0 | 4.82e-01 | 86.3% | 78.9% |
| 3s4lA00 | 1.10.3210.30 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › | 0.63 | 53.0 | 3.62e-01 | 98.0% | 56.9% |
| 2e6oA00 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.62 | 44.0 | 3.80e-01 | 82.4% | 44.8% |
| 2euiA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.62 | 45.0 | 3.44e-01 | 82.4% | 43.6% |
| 3uk6A02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.62 | 45.0 | 3.96e-01 | 82.4% | 54.2% |
| 6w6jD01 | 1.10.1780.10 | Mainly Alpha › Orthogonal Bundle › Double Clp-N motif › Clp, N-terminal domain | 0.61 | 52.0 | 3.98e-01 | 100.0% | 80.2% |
| 3bemB00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.60 | 54.0 | 3.53e-01 | 98.0% | 27.8% |
| 2w9mB01 | 1.10.150.110 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › DNA polymerase beta, N-terminal domain-like | 0.60 | 48.0 | 4.14e-01 | 92.2% | 91.9% |
| 2c9oB03 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.59 | 43.0 | 3.77e-01 | 82.4% | 54.2% |
| 1sr9A02 | 3.30.160.270 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Alpha-isopropylmalate synthase LeuA, regulatory domain | 0.58 | 46.0 | 3.24e-01 | 88.2% | 82.9% |
| 1vfiA00 | 1.10.246.100 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Vanadium-binding protein 2 | 0.58 | 44.0 | 3.61e-01 | 98.0% | 45.3% |
| 4gxbA02 | 1.20.80.60 | Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › | 0.57 | 47.0 | 4.48e-01 | 94.1% | 83.9% |
| 2wtbA01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.57 | 47.0 | 2.90e-01 | 90.2% | 18.1% |
| 1j09A04 | 1.10.8.70 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Glutamate-tRNA synthetase, class I, anticodon-binding domain 1 | 0.56 | 41.0 | 4.16e-01 | 82.4% | 100.0% |
| 3dsbA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.56 | 40.0 | 3.44e-01 | 84.3% | 75.2% |
| 3nufB00 | 1.10.1790.10 | Mainly Alpha › Orthogonal Bundle › PTS-regulatory domain, PRD › PRD domain | 0.55 | 41.0 | 3.43e-01 | 92.2% | 80.4% |
ECOD (36)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3264584 | 5010.1.1.0 ↗ | extended segments › Bacterial aa3 type cytochrome c oxidase subunit IV › Bacterial aa3 type cytochrome c oxidase subunit IV › Bacterial aa3 type cytochrome c oxidase subunit IV | 0.78 | 57.0 | 5.79e-01 | 78.4% | 78.0% |
| 3984343 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.78 | 67.0 | 4.49e-01 | 100.0% | 30.5% |
| 5082532 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.75 | 64.0 | 5.87e-01 | 100.0% | 82.9% |
| 5006976 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.75 | 59.0 | 4.17e-01 | 88.2% | 73.8% |
| 3287198 | 191.1.1.0 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain | 0.75 | 64.0 | 4.66e-01 | 100.0% | 51.4% |
| 3518379 | 3502.1.1.1 ↗ | alpha bundles › uncharacterized conserved protein › uncharacterized conserved protein › uncharacterized conserved protein › YebG | 0.74 | 60.0 | 5.86e-01 | 90.2% | 85.5% |
| 4032062 | 162.1.1.0 ↗ | alpha bundles › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD | 0.74 | 53.0 | 4.14e-01 | 78.4% | 35.5% |
| 4044417 | 1037.1.1.1 ↗ | alpha bundles › Prolipoprotein diacylglyceryl transferase › Prolipoprotein diacylglyceryl transferase › Prolipoprotein diacylglyceryl transferase › LGT | 0.73 | 63.0 | 3.94e-01 | 100.0% | 74.6% |
| 3165347 | 148.1.3.335 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AzlD | 0.72 | 54.0 | 4.82e-01 | 88.2% | 56.8% |
| 185221 | 3502.1.1.1 ↗ | alpha bundles › uncharacterized conserved protein › uncharacterized conserved protein › uncharacterized conserved protein › YebG | 0.71 | 63.0 | 5.75e-01 | 100.0% | 97.0% |
| 3226591 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.70 | 57.0 | 4.34e-01 | 100.0% | 40.0% |
| 4341780 | 4957.1.1.0 ↗ | a+b complex topology › helical domain in yeast RNA-polymerases › third helical domain in yeast RNA-polymerase II beta-prime subunit › third helical domain in yeast RNA-polymerase II beta-prime subunit | 0.69 | 55.0 | 5.23e-01 | 96.1% | 81.5% |
| 162296 | 103.4.1.2 ↗ | alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › TFIIS_M | 0.69 | 56.0 | 4.43e-01 | 98.0% | 70.8% |
| 4644218 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.67 | 53.0 | 4.65e-01 | 98.0% | 57.6% |
| 4991104 | 1075.3.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC importer transmembrane domain fold › Type I ABC importer transmembrane domain fold › BPD_transp_1 | 0.66 | 56.0 | 3.51e-01 | 98.0% | 15.9% |
| 4082855 | 106.1.1.4 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like › Rsbr_N | 0.66 | 52.0 | 3.95e-01 | 94.1% | 42.9% |
| 3625029 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.66 | 48.0 | 3.94e-01 | 82.4% | 54.3% |
| 3697477 | 7581.1.1.7 ↗ | a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › Ketoacyl-synt_C | 0.66 | 54.0 | 3.27e-01 | 90.2% | 16.8% |
| 2833148 | 1128.1.1.1 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein › Complex1_LYR | 0.66 | 57.0 | 4.44e-01 | 100.0% | 70.4% |
| 3519328 | 148.1.3.18 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › TIP49_C | 0.65 | 47.0 | 4.01e-01 | 82.4% | 69.5% |
| 3644157 | 148.1.3.42 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid | 0.64 | 47.0 | 4.65e-01 | 82.4% | 85.5% |
| 2858351 | 1128.1.1.2 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein › Complex1_LYR_2 | 0.64 | 55.0 | 4.28e-01 | 100.0% | 70.7% |
| 3175298 | 130.1.1.51 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › Tho1_MOS11_C | 0.64 | 52.0 | 4.93e-01 | 88.2% | 85.0% |
| 3928773 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.63 | 45.0 | 4.01e-01 | 76.5% | 82.7% |
| 4148075 | 102.1.1.42 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › RNAseD_HRDC_C | 0.63 | 48.0 | 4.59e-01 | 90.2% | 75.4% |
| 5028605 | 148.1.3.47 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › DNAX_ATPase_lid | 0.62 | 44.0 | 4.28e-01 | 80.4% | 100.0% |
| 4974262 | 148.1.3.42 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid | 0.62 | 44.0 | 4.30e-01 | 80.4% | 98.3% |
| 3615878 | 632.1.1.3 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain › Alpha-mann_mid | 0.62 | 53.0 | 4.27e-01 | 94.1% | 72.6% |
| 4982784 | 148.1.3.42 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid | 0.62 | 44.0 | 4.26e-01 | 80.4% | 75.0% |
| 3690980 | 1128.1.1.1 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein › Complex1_LYR | 0.61 | 51.0 | 4.11e-01 | 96.1% | 80.0% |
| 1487360 | 3929.1.1.1 ↗ | alpha bundles › THO1 C-terminal domain › THO1 C-terminal domain › THO1 C-terminal domain › Tho1_MOS11_C | 0.61 | 49.0 | 4.50e-01 | 90.2% | 91.0% |
| 3269970 | 1128.1.1.0 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein | 0.61 | 52.0 | 4.21e-01 | 100.0% | 78.1% |
| 2557383 | 1128.1.1.1 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein › Complex1_LYR | 0.61 | 48.0 | 3.69e-01 | 88.2% | 64.2% |
| 4452139 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.60 | 49.0 | 3.68e-01 | 100.0% | 69.3% |
| None | — | 0.60 | 44.0 | 3.08e-01 | 86.3% | 23.0% | |
| 4675322 | 101.8.1.2 ↗ | alpha arrays › HTH › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › Anticodon_2 | 0.59 | 45.0 | 3.27e-01 | 88.2% | 73.6% |