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OP484857.1__UYE95777.1__HAAEEKHM_00057__00057

Bact-Vir

OP484857.1__UYE95777.1__HAAEEKHM_00057__00057

Identity

Accession:
OP484857 ↗
Kingdom:
phage

Quality

89.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 40-91
PDB
Domain cluster: representative
CATH (46)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4nb5B02 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.76 66.0 6.15e-01 100.0% 76.6%
1b5lA00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.76 70.0 4.88e-01 100.0% 63.8%
3fd9A03 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.75 66.0 5.85e-01 96.2% 93.2%
1vx7301 1.10.287.310 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.74 60.0 5.26e-01 100.0% 60.8%
1zkeA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.74 66.0 5.68e-01 100.0% 93.8%
3lssA01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.74 66.0 5.06e-01 100.0% 45.5%
1x0tA01 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.73 58.0 5.53e-01 94.2% 73.8%
2xseA00 1.20.120.1440 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › JBP1, DNA-binding domain 0.73 63.0 4.51e-01 100.0% 39.6%
3rrkA02 1.20.1460.20 Mainly Alpha › Up-down Bundle › subunit c (vma5p) of the yeast v-atpase, domain 2 › 0.73 66.0 4.61e-01 100.0% 49.7%
1vw4T01 6.10.330.20 Special › Helix non-globular › Monooxygenase › 0.72 64.0 4.94e-01 100.0% 46.4%
1urfA00 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.71 64.0 5.50e-01 100.0% 64.2%
2etnB01 1.10.287.180 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Transcription elongation factor, GreA/GreB, N-terminal domain 0.71 64.0 5.59e-01 100.0% 73.7%
6vq6G02 1.20.1460.10 Mainly Alpha › Up-down Bundle › subunit c (vma5p) of the yeast v-atpase, domain 2 › subunit c (vma5p) of the yeast v-atpase, domain 2 0.71 60.0 4.05e-01 100.0% 26.6%
2a3qA00 1.10.287.1080 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like 0.70 63.0 4.86e-01 100.0% 58.4%
4aflA00 6.10.140.1740 Special › Helix non-globular › Helix Hairpins › 0.70 63.0 5.02e-01 100.0% 52.0%
1wcrA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.70 62.0 4.94e-01 100.0% 65.0%
1b06A01 1.10.287.990 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain 0.69 61.0 5.60e-01 100.0% 85.1%
1pd3A00 1.10.287.230 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.68 58.0 5.79e-01 100.0% 92.6%
1b3qA01 1.10.287.560 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Histidine kinase CheA-like, homodimeric domain 0.68 54.0 5.18e-01 90.4% 88.7%
1u7lA02 1.20.1460.10 Mainly Alpha › Up-down Bundle › subunit c (vma5p) of the yeast v-atpase, domain 2 › subunit c (vma5p) of the yeast v-atpase, domain 2 0.67 55.0 3.95e-01 100.0% 84.2%
8b6jF01 1.10.287.20 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Ubiquinol-cytochrome C reductase hinge domain 0.67 52.0 4.79e-01 100.0% 65.7%
2c2aA01 1.10.287.130 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.67 58.0 4.91e-01 100.0% 58.9%
2aswA00 1.10.8.500 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › HAMP domain in histidine kinase 0.67 44.0 4.37e-01 94.2% 64.3%
2zy2A02 1.10.20.110 Mainly Alpha › Orthogonal Bundle › Histone, subunit A › 0.67 57.0 4.21e-01 100.0% 93.2%
2q0oC00 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.67 58.0 4.96e-01 100.0% 64.0%
2i7uA00 6.10.250.1010 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.66 55.0 5.24e-01 96.2% 82.3%
2yksA02 1.20.58.390 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Neurotransmitter-gated ion-channel transmembrane domain 0.65 56.0 4.39e-01 100.0% 48.7%
3u0cA00 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.64 54.0 3.97e-01 100.0% 38.4%
2gtsA00 1.10.287.850 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain 0.63 54.0 4.86e-01 100.0% 77.9%
2j3tD01 3.30.450.70 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.63 50.0 3.78e-01 90.4% 35.1%
7miqA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.63 54.0 4.31e-01 100.0% 49.1%
4nsmA00 6.10.250.2770 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.62 54.0 4.95e-01 100.0% 83.1%
2gsvA00 6.10.140.40 Special › Helix non-globular › Helix Hairpins › 0.62 50.0 4.64e-01 96.2% 68.7%
3r84A00 1.10.287.3490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.62 53.0 4.66e-01 100.0% 65.4%
4a17U01 1.10.287.310 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.62 53.0 4.74e-01 100.0% 68.8%
6r1nA01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.62 52.0 4.26e-01 100.0% 68.0%
1ku9A02 1.10.287.450 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.62 51.0 4.89e-01 98.1% 87.5%
3nrxA00 1.20.58.1520 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.61 51.0 4.00e-01 100.0% 43.1%
3d36B02 1.10.287.130 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.60 50.0 4.83e-01 100.0% 91.8%
4mndA02 1.20.120.1760 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CDP-alcohol phosphotransferase transmembrane (TM) domain 0.60 52.0 3.59e-01 100.0% 28.3%
3l1nA01 6.10.140.790 Special › Helix non-globular › Helix Hairpins › 0.60 50.0 5.07e-01 98.1% 100.0%
3t98B00 6.10.140.1350 Special › Helix non-globular › Helix Hairpins › 0.59 50.0 4.36e-01 100.0% 65.1%
1ij5A01 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.59 49.0 4.44e-01 100.0% 72.4%
2ipcA04 1.10.3060.10 Mainly Alpha › Orthogonal Bundle › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA 0.57 49.0 3.21e-01 100.0% 31.8%
1fs0G02 1.10.287.80 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain 0.56 47.0 4.02e-01 100.0% 62.9%
4l0rB00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.55 44.0 4.12e-01 100.0% 72.6%
ECOD (56)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3818733 4163.1.1.1 alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like › Sld5 0.78 71.0 5.03e-01 100.0% 35.9%
3596488 3737.1.1.0 alpha duplicates or obligate multimers › Major allergen Bla g 1 tandem repeats › Major allergen Bla g 1 tandem repeats › Major allergen Bla g 1 tandem repeats 0.78 70.0 5.22e-01 100.0% 44.0%
4038778 192.7.1.2 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.76 71.0 5.31e-01 100.0% 46.1%
3971706 5071.3.1.1 alpha bundles › cytochrome bc1 complex 11 kDa protein-like › DUF465 › DUF465 › DUF465 0.76 70.0 6.27e-01 100.0% 75.7%
3228000 605.4.1.0 alpha duplicates or obligate multimers › ROP-like › ROP protein › ROP protein 0.75 69.0 6.03e-01 100.0% 70.7%
5074487 109.4.1.5 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1 0.75 68.0 3.98e-01 100.0% 13.7%
3930829 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.74 69.0 5.98e-01 100.0% 98.7%
4942772 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.74 69.0 6.31e-01 100.0% 81.5%
3698292 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.74 66.0 4.75e-01 100.0% 37.9%
5044551 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.74 62.0 5.73e-01 100.0% 73.8%
3184698 3291.1.1.0 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.73 67.0 5.47e-01 100.0% 73.3%
3904566 3291.1.1.0 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.73 66.0 4.31e-01 100.0% 30.2%
3488333 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.72 63.0 4.82e-01 98.1% 43.5%
3930310 192.5.1.0 alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat 0.72 59.0 4.84e-01 88.5% 70.8%
3563979 174.1.1.1 few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin 0.72 62.0 4.57e-01 100.0% 90.3%
4174713 192.1.1.2 alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain › GreA_GreB_N 0.72 65.0 5.57e-01 100.0% 66.3%
5039854 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.72 65.0 5.73e-01 100.0% 69.3%
3283686 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.72 64.0 5.78e-01 100.0% 78.6%
3589446 2004.1.1.301 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_27 0.71 65.0 3.72e-01 100.0% 39.8%
4286197 605.1.1.1 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.71 63.0 5.44e-01 100.0% 63.7%
3810801 632.22.1.139 alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › KIF21A_4th 0.71 65.0 4.57e-01 100.0% 37.3%
3770066 3291.1.1.169 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › KIF21A_4th 0.71 64.0 4.22e-01 100.0% 32.3%
4203309 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.70 63.0 3.65e-01 100.0% 12.0%
3887929 174.1.1.1 few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin 0.70 61.0 4.67e-01 100.0% 55.0%
3175323 7015.1.1.1 alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › DHHC 0.70 62.0 3.90e-01 100.0% 19.6%
3561663 3567.1.1.0 a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer 0.69 62.0 5.99e-01 100.0% 91.5%
3421989 3291.1.1.0 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.68 60.0 4.52e-01 100.0% 44.8%
3686421 616.1.1.0 alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain 0.68 58.0 4.79e-01 94.2% 78.9%
3386554 605.1.1.1 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.68 61.0 5.36e-01 100.0% 69.3%
3358852 3755.4.1.62 alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › PF31016 0.67 59.0 4.21e-01 100.0% 75.5%
3286769 5069.1.1.0 alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes 0.67 58.0 4.23e-01 100.0% 36.0%
3574610 3755.4.1.0 alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain 0.66 57.0 3.87e-01 100.0% 26.5%
2893266 5041.1.1.1 extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › ATP-synt_C 0.66 58.0 4.84e-01 100.0% 64.1%
3714831 109.54.1.0 alpha superhelices › Repetitive alpha hairpins › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 0.66 59.0 4.57e-01 100.0% 50.9%
3715472 2004.1.1.184 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 0.66 57.0 3.19e-01 100.0% 19.0%
4612826 605.1.1.1 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.66 56.0 4.94e-01 100.0% 73.8%
3992068 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.65 57.0 4.51e-01 100.0% 49.1%
2732157 605.1.1.1 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.65 57.0 5.22e-01 100.0% 85.5%
3936581 174.1.1.0 few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.65 57.0 3.86e-01 100.0% 27.9%
3287947 605.1.1.1 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.64 54.0 4.64e-01 100.0% 62.2%
3385950 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.64 56.0 5.12e-01 100.0% 98.6%
4267024 605.1.1.1 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.64 56.0 4.99e-01 100.0% 69.3%
3490268 148.1.3.13 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_9 0.64 55.0 3.36e-01 100.0% 24.2%
4336724 192.7.1.2 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.63 53.0 4.23e-01 98.1% 50.9%
4945473 2498.1.1.10 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M48 0.63 53.0 3.27e-01 96.2% 16.3%
4028290 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.63 53.0 4.33e-01 100.0% 50.5%
3651322 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.62 53.0 3.27e-01 100.0% 16.1%
3440420 632.22.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats 0.61 53.0 4.00e-01 96.2% 41.7%
3808476 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.61 51.0 4.73e-01 100.0% 75.7%
3349325 5086.1.1.135 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › DUF7615 0.60 50.0 4.47e-01 100.0% 70.0%
3701384 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.60 49.0 3.42e-01 100.0% 28.7%
4357993 3291.1.1.58 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › QcrA_N 0.60 53.0 4.03e-01 100.0% 46.7%
3936737 150.1.1.0 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin 0.59 49.0 3.32e-01 100.0% 30.0%
3574040 192.8.1.34 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › Meckelin 0.58 49.0 4.07e-01 100.0% 56.0%
3582494 192.5.1.0 alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat 0.58 47.0 3.92e-01 100.0% 50.5%
3572161 541.1.1.12 alpha duplicates or obligate multimers › Dimerization-anchoring domain of cAMP-dependent type II PK regulatory subunit › Dimerization-anchoring domain of cAMP-dependent type II PK regulatory subunit › Dimerization-anchoring domain of cAMP-dependent type II PK regulatory subunit › PF30825 0.57 46.0 3.86e-01 90.4% 55.6%