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OP484857.1__UYE95779.1__HAAEEKHM_00059__00059
Bact-VirOP484857.1__UYE95779.1__HAAEEKHM_00059__00059
Identity
- Accession:
- OP484857 ↗
- Kingdom:
- phage
Quality
52.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 88-149
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 8be0A01 | 3.40.91.90 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › Influenza RNA-dependent RNA polymerase subunit PA, endonuclease domain | 0.64 | 52.0 | 3.73e-01 | 90.3% | 92.1% |
| 3gwiA00 | 3.40.1110.10 | Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N | 0.61 | 51.0 | 3.89e-01 | 100.0% | 69.5% |
| 1kczA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.61 | 45.0 | 3.29e-01 | 95.2% | 30.1% |
| 3aeiA00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.56 | 46.0 | 4.01e-01 | 88.7% | 62.8% |
| 3r4iA02 | 6.10.140.960 | Special › Helix non-globular › Helix Hairpins › | 0.54 | 38.0 | 3.95e-01 | 100.0% | 78.3% |
| 3iieB03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.51 | 43.0 | 3.87e-01 | 90.3% | 91.8% |
| 1vq0A02 | 3.90.1280.10 | Alpha Beta › Alpha-Beta Complex › CBS domain Like › HSP33 redox switch-like | 0.51 | 36.0 | 3.68e-01 | 93.5% | 82.5% |
| 1dmhA00 | 2.60.130.10 | Mainly Beta › Sandwich › Protocatechuate 3,4-Dioxygenase, subunit A › Aromatic compound dioxygenase | 0.51 | 40.0 | 2.59e-01 | 88.7% | 55.7% |
| 2ppqA02 | 3.90.1200.10 | Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe | 0.50 | 40.0 | 2.88e-01 | 93.5% | 80.4% |
| 2fsjA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.50 | 41.0 | 3.18e-01 | 90.3% | 65.9% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3594658 | 210.1.3.0 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases | 0.71 | 51.0 | 3.46e-01 | 74.2% | 42.1% |
| 4028685 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.71 | 50.0 | 4.04e-01 | 72.6% | 55.5% |
| None | — | 0.70 | 48.0 | 3.41e-01 | 71.0% | 26.7% | |
| 3632945 | 109.4.1.162 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Nup192 | 0.61 | 42.0 | 2.77e-01 | 71.0% | 50.9% |
| 4289468 | 2004.1.1.363 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase+UvrD_C | 0.61 | 42.0 | 2.31e-01 | 72.6% | 16.4% |
| 3926959 | 605.6.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › HP1531-like › HP1531-like | 0.58 | 44.0 | 3.98e-01 | 100.0% | 58.8% |
| 4224821 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.58 | 47.0 | 3.82e-01 | 88.7% | 54.8% |
| 5059005 | 5068.1.1.0 ↗ | alpha bundles › a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) › a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) › a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | 0.57 | 40.0 | 2.95e-01 | 75.8% | 79.4% |
| 5062774 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 41.0 | 2.94e-01 | 75.8% | 62.4% |
| 4996700 | 2485.1.1.38 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_3 | 0.56 | 38.0 | 3.35e-01 | 71.0% | 72.6% |
| 3937187 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.55 | 43.0 | 3.67e-01 | 88.7% | 51.8% |
| 5013274 | 5011.1.1.0 ↗ | extended segments › Bacterial ba3 type cytochrome c oxidase subunit IIa › Bacterial ba3 type cytochrome c oxidase subunit IIa › Bacterial ba3 type cytochrome c oxidase subunit IIa | 0.55 | 37.0 | 3.44e-01 | 72.6% | 67.1% |
| 2076676 | 4012.1.1.4 ↗ | a+b two layers › SSHS domain › SSHS domain in type II DNA topoisomerase › SSHS domain in type II DNA topoisomerase › GyrB_hook | 0.55 | 41.0 | 4.52e-01 | 88.7% | 98.0% |
| 5032364 | 7569.1.1.0 ↗ | a/b three-layered sandwiches › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like | 0.52 | 41.0 | 2.82e-01 | 83.9% | 37.7% |
| 3886971 | 3704.1.1.0 ↗ | alpha superhelices › Apoptotic protease-activating factor 1 (Apaf-1) helical domain › Apoptotic protease-activating factor 1 (Apaf-1) helical domain › Apoptotic protease-activating factor 1 (Apaf-1) helical domain | 0.52 | 39.0 | 2.94e-01 | 85.5% | 56.0% |
| 3831782 | 109.4.1.1531 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF7812 | 0.51 | 45.0 | 2.89e-01 | 96.8% | 46.3% |
| 3484831 | 1089.1.1.1 ↗ | a+b two layers › Asparaginal-tRNA synthetase N-terminal domain › Asparaginal-tRNA synthetase N-terminal domain › Asparaginal-tRNA synthetase N-terminal domain › AsnRS_N | 0.51 | 45.0 | 4.25e-01 | 100.0% | 92.0% |