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OP484858.1__UYE95839.1__KNLIENLN_00026__00026
Bact-VirOP484858.1__UYE95839.1__KNLIENLN_00026__00026
Identity
- Accession:
- OP484858 ↗
- Kingdom:
- phage
Quality
88.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 10-90
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ho1B00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.64 | 45.0 | 3.29e-01 | 72.8% | 53.4% |
| 1w3bB00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.64 | 45.0 | 2.89e-01 | 72.8% | 30.4% |
| 1xnfA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.61 | 44.0 | 3.10e-01 | 76.5% | 45.2% |
| 2qgmA03 | 1.20.1440.30 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Biosynthetic Protein domain | 0.53 | 36.0 | 3.24e-01 | 70.4% | 82.8% |
| 5aioA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.51 | 35.0 | 3.00e-01 | 74.1% | 72.9% |
| 4houB00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.50 | 39.0 | 2.95e-01 | 90.1% | 96.3% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3315846 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.74 | 52.0 | 3.39e-01 | 72.8% | 52.4% |
| 3291807 | 109.4.1.1258 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2 | 0.72 | 52.0 | 3.70e-01 | 76.5% | 51.7% |
| 3785667 | 3712.1.1.10 ↗ | a+b complex topology › Mediator of RNA polymerase II transcription subunit 11 › Mediator of RNA polymerase II transcription subunit 11 › Mediator of RNA polymerase II transcription subunit 11 › Gsf2 | 0.68 | 47.0 | 4.45e-01 | 71.6% | 69.5% |
| 4024267 | 109.4.1.200 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_14 | 0.65 | 48.0 | 3.00e-01 | 77.8% | 25.2% |
| 3421024 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.65 | 45.0 | 3.32e-01 | 72.8% | 60.0% |
| 3169451 | 109.4.1.3193 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HAT, Suf, HAT_Syf1_CNRKL1_C, HAT_Syf1_CNRKL1_N, HAT_PRP39_N | 0.62 | 55.0 | 3.25e-01 | 100.0% | 34.4% |
| 3665890 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.61 | 44.0 | 3.39e-01 | 76.5% | 61.5% |
| 3862877 | 109.4.1.2270 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, HAT_Syf1_CNRKL1_C | 0.60 | 46.0 | 3.38e-01 | 81.5% | 51.9% |
| 3833475 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.59 | 43.0 | 3.75e-01 | 75.3% | 77.5% |
| 3414673 | 109.4.1.1788 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HAT, HAT_Syf1_CNRKL1_C, HAT_Syf1_CNRKL1_N, HAT_PRP39_C | 0.59 | 50.0 | 3.03e-01 | 100.0% | 35.3% |
| 4306566 | 109.4.1.2256 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HAT, TPR_14, HAT_Syf1_CNRKL1_N | 0.55 | 40.0 | 2.99e-01 | 76.5% | 45.6% |
| 3651090 | 2002.1.1.95 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Pantoate_transf | 0.53 | 36.0 | 2.45e-01 | 70.4% | 47.9% |