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OP484858.1__UYE95887.1__KNLIENLN_00075__00074
Bact-VirOP484858.1__UYE95887.1__KNLIENLN_00075__00074
Identity
- Accession:
- OP484858 ↗
- Kingdom:
- phage
Quality
95.3
mean pLDDT
Cluster
View cluster (19 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 37-163_201-222_292-298
Domain cluster:
rep: CAKLQF020000016.1__CAH1088165.1__SAMEA5780031_02845__00068__D54-174
Pfam (7)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13489.13 best | Methyltransf_23 | 67.0 | 2.30e-18 | 93.6% | 68.9% |
| PF13847.13 | Methyltransf_31 | 56.9 | 2.90e-15 | 80.8% | 73.3% |
| PF06325.20 | PrmA | 22.8 | 8.20e-05 | 75.0% | 32.4% |
| PF08241.19 | Methyltransf_11 | 50.7 | 3.20e-13 | 64.1% | 100.0% |
| PF08242.19 | Methyltransf_12 | 53.7 | 4.00e-14 | 62.8% | 100.0% |
| PF13649.13 | Methyltransf_25 | 48.2 | 2.10e-12 | 62.2% | 100.0% |
| PF09445.17 | Methyltransf_15 | 24.0 | 3.50e-05 | 48.1% | 24.9% |
D2
high
residues 226-288
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3tklB01 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.76 | 56.0 | 5.73e-01 | 79.4% | 87.1% |
| 2h21A02 | 3.90.1420.10 | Alpha Beta › Alpha-Beta Complex › set domain protein methyltransferase, domain 2 › Rubisco LSMT, substrate-binding domain | 0.74 | 59.0 | 4.37e-01 | 88.9% | 60.6% |
| 1wa8A00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.73 | 56.0 | 4.89e-01 | 85.7% | 58.6% |
| 2pmsC00 | 6.10.140.920 | Special › Helix non-globular › Helix Hairpins › | 0.73 | 56.0 | 4.64e-01 | 85.7% | 47.7% |
| 4nsmA00 | 6.10.250.2770 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.73 | 57.0 | 5.55e-01 | 87.3% | 97.2% |
| 3syvA01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.66 | 56.0 | 3.84e-01 | 100.0% | 75.5% |
| 1d2mA03 | 6.10.140.240 | Special › Helix non-globular › Helix Hairpins › | 0.65 | 54.0 | 5.34e-01 | 100.0% | 92.4% |
| 2kg7B00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.62 | 48.0 | 4.28e-01 | 88.9% | 58.8% |
| 2xvtC00 | 1.10.150.510 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Receptor activity modifying family | 0.59 | 43.0 | 4.08e-01 | 88.9% | 63.3% |
| 5nohA00 | 1.20.120.1350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Pneumovirus matrix protein 2 (M2), zinc-binding domain | 0.55 | 47.0 | 4.07e-01 | 100.0% | 77.7% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4949374 | 616.1.1.0 ↗ | alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain | 0.79 | 58.0 | 5.80e-01 | 77.8% | 78.5% |
| 2337262 | 1189.1.1.1 ↗ | alpha bundles › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › Trypan_glycop | 0.76 | 59.0 | 5.14e-01 | 85.7% | 67.0% |
| 4951260 | 601.14.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Hemerythrin › Hemerythrin › Hemerythrin | 0.74 | 66.0 | 5.08e-01 | 100.0% | 60.7% |
| 3714091 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.72 | 61.0 | 5.81e-01 | 95.2% | 84.0% |
| 3266812 | 3291.1.1.211 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › EMC3_TMCO1 | 0.70 | 52.0 | 3.93e-01 | 84.1% | 31.9% |
| 4031187 | 632.19.1.3 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Choline binding protein A › Choline binding protein A › DUF1542 | 0.68 | 56.0 | 5.37e-01 | 96.8% | 84.0% |
| 5045370 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.67 | 50.0 | 5.11e-01 | 81.0% | 86.7% |
| 4213046 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.66 | 50.0 | 4.98e-01 | 82.5% | 80.0% |
| 3519300 | 1147.1.1.1 ↗ | alpha bundles › RNA polymerase II elongation factor ELL2 C-terminal domain › RNA polymerase II elongation factor ELL2 C-terminal domain › RNA polymerase II elongation factor ELL2 C-terminal domain › Occludin_ELL | 0.65 | 50.0 | 4.17e-01 | 85.7% | 45.8% |