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OP484858.1__UYE95888.1__KNLIENLN_00076__00075
Bact-VirOP484858.1__UYE95888.1__KNLIENLN_00076__00075
Identity
- Accession:
- OP484858 ↗
- Kingdom:
- phage
Quality
95.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-66
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3vxvA00 | 3.30.890.10 | Alpha Beta › 2-Layer Sandwich › Methyl-cpg-binding Protein 2; Chain A › Methyl-cpg-binding Protein 2; Chain A | 0.64 | 43.0 | 4.39e-01 | 100.0% | 70.8% |
| 3luqB00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.62 | 35.0 | 2.95e-01 | 83.3% | 31.6% |
| 4dkkA02 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.60 | 41.0 | 4.02e-01 | 72.7% | 87.8% |
| 1whqA01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.60 | 41.0 | 4.09e-01 | 74.2% | 94.4% |
| 2mdrA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.57 | 46.0 | 4.18e-01 | 90.9% | 87.2% |
| 1cx8A01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.57 | 41.0 | 2.73e-01 | 78.8% | 34.2% |
| 2n3gA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.57 | 40.0 | 3.92e-01 | 75.8% | 95.8% |
| 1qu6A02 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.56 | 39.0 | 3.80e-01 | 75.8% | 88.2% |
| 4zv9A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.55 | 39.0 | 2.76e-01 | 77.3% | 93.7% |
| 3i3lA02 | 3.30.390.160 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › | 0.55 | 39.0 | 3.25e-01 | 77.3% | 96.8% |
| 1tkjA00 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.55 | 41.0 | 2.75e-01 | 81.8% | 39.7% |
| 1rm6A03 | 3.30.365.10 | Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain | 0.54 | 38.0 | 3.13e-01 | 75.8% | 60.6% |
| 2afsA00 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.53 | 39.0 | 2.67e-01 | 86.4% | 34.1% |
| 4mh4A02 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.52 | 36.0 | 3.25e-01 | 72.7% | 67.0% |
| 2mcfA00 | 3.40.50.11630 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.50 | 36.0 | 2.83e-01 | 75.8% | 49.3% |
ECOD (42)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3866247 | 252.1.1.1 ↗ | a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD › MBD | 0.69 | 49.0 | 4.86e-01 | 75.8% | 74.3% |
| 3539740 | 378.1.1.19 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_3 | 0.65 | 46.0 | 3.72e-01 | 74.2% | 43.2% |
| 4018452 | 7579.1.1.36 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_3 | 0.62 | 44.0 | 2.91e-01 | 77.3% | 84.9% |
| 4160593 | 3675.1.1.1 ↗ | a+b complex topology › DNA gyrase subunit B insertion domain › DNA gyrase subunit B insertion domain › DNA gyrase subunit B insertion domain › GyrB_insert | 0.61 | 42.0 | 3.14e-01 | 71.2% | 49.7% |
| 2439579 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.61 | 48.0 | 3.14e-01 | 86.4% | 43.0% |
| 3645375 | 386.1.1.117 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › DUF7028 | 0.61 | 53.0 | 4.76e-01 | 100.0% | 88.3% |
| 3670347 | 252.1.1.1 ↗ | a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD › MBD | 0.61 | 42.0 | 4.02e-01 | 72.7% | 74.7% |
| 4862964 | 3675.1.1.1 ↗ | a+b complex topology › DNA gyrase subunit B insertion domain › DNA gyrase subunit B insertion domain › DNA gyrase subunit B insertion domain › GyrB_insert | 0.61 | 42.0 | 3.06e-01 | 72.7% | 47.1% |
| 5066997 | 4295.1.1.1 ↗ | beta barrels › Acetoacetate decarboxylase-like › Acetoacetate decarboxylase-like › Acetoacetate decarboxylase-like › ADC | 0.61 | 48.0 | 3.24e-01 | 87.9% | 68.9% |
| 4025995 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.60 | 41.0 | 2.82e-01 | 71.2% | 62.1% |
| 3492441 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.60 | 42.0 | 4.05e-01 | 74.2% | 94.7% |
| 4995231 | 101.1.2.914 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF6015 | 0.58 | 45.0 | 4.07e-01 | 83.3% | 82.2% |
| 4356796 | 1001.1.1.1 ↗ | a+b two layers › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 › Molybdop_Fe4S4 | 0.58 | 38.0 | 3.73e-01 | 84.8% | 61.4% |
| 4493573 | 4964.1.1.2 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › RNA_pol | 0.58 | 48.0 | 3.57e-01 | 98.5% | 35.5% |
| 3883088 | 252.1.1.1 ↗ | a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD › MBD | 0.58 | 48.0 | 4.77e-01 | 92.4% | 87.1% |
| 5556 | 242.1.1.4 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › Endonuc_subdom | 0.57 | 41.0 | 3.68e-01 | 77.3% | 76.5% |
| 5055411 | 2011.1.1.6 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M20 | 0.57 | 42.0 | 2.82e-01 | 78.8% | 95.7% |
| 5032566 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.57 | 48.0 | 2.99e-01 | 100.0% | 46.5% |
| 5066958 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.56 | 49.0 | 3.09e-01 | 100.0% | 33.5% |
| 4996301 | 2011.1.1.8 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M28 | 0.56 | 42.0 | 2.84e-01 | 81.8% | 40.3% |
| 5035441 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.56 | 47.0 | 2.90e-01 | 100.0% | 49.9% |
| 3505247 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.56 | 44.0 | 4.11e-01 | 92.4% | 100.0% |
| 1826875 | 330.13.1.1 ↗ | a+b two layers › dsRBD-like › dGTP triphosphohydrolase inhibitor › dGTP triphosphohydrolase inhibitor › T7-like_gp12 | 0.55 | 37.0 | 3.51e-01 | 71.2% | 80.0% |
| 3426157 | 219.1.1.71 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › PDDEXK_6 | 0.55 | 42.0 | 3.19e-01 | 83.3% | 53.9% |
| 5041027 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.55 | 41.0 | 3.68e-01 | 80.3% | 75.8% |
| 3294049 | 219.1.1.71 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › PDDEXK_6 | 0.55 | 42.0 | 3.23e-01 | 87.9% | 56.5% |
| 3670739 | 101.1.2.98 ↗ | alpha arrays › HTH › HTH › winged helix domain › CDT1 | 0.54 | 41.0 | 3.16e-01 | 83.3% | 71.2% |
| 4971711 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 37.0 | 3.11e-01 | 74.2% | 70.4% |
| 3174904 | 2011.1.1.8 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M28 | 0.54 | 39.0 | 2.61e-01 | 80.3% | 33.2% |
| 4997451 | 2011.1.1.6 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M20 | 0.53 | 43.0 | 2.90e-01 | 90.9% | 93.5% |
| 3656807 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 38.0 | 3.46e-01 | 75.8% | 70.0% |
| 5082698 | 101.1.2.914 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF6015 | 0.53 | 40.0 | 3.62e-01 | 80.3% | 80.0% |
| 3194016 | 2011.1.1.8 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M28 | 0.53 | 40.0 | 2.66e-01 | 84.8% | 91.1% |
| 4971051 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.52 | 42.0 | 2.67e-01 | 87.9% | 79.4% |
| 4547017 | 109.3.1.99 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2+Ank_5 | 0.52 | 38.0 | 2.71e-01 | 81.8% | 23.3% |
| 3241140 | 2004.1.1.199 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23,SbcC_Walker_B | 0.52 | 42.0 | 2.48e-01 | 93.9% | 82.5% |
| 4546376 | 3922.1.1.276 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › SMC_N, AAA_21 | 0.52 | 43.0 | 2.66e-01 | 100.0% | 49.4% |
| 3665317 | 101.1.2.98 ↗ | alpha arrays › HTH › HTH › winged helix domain › CDT1 | 0.51 | 39.0 | 3.20e-01 | 84.8% | 80.7% |
| 3343334 | 101.1.2.98 ↗ | alpha arrays › HTH › HTH › winged helix domain › CDT1 | 0.51 | 39.0 | 3.11e-01 | 84.8% | 79.3% |
| 3334401 | 101.1.2.566 ↗ | alpha arrays › HTH › HTH › winged helix domain › CDT1, CDT1_C | 0.51 | 39.0 | 2.66e-01 | 84.8% | 42.8% |
| 3371797 | 101.1.2.98 ↗ | alpha arrays › HTH › HTH › winged helix domain › CDT1 | 0.50 | 35.0 | 3.26e-01 | 75.8% | 68.9% |
| 3691415 | 2004.1.1.748 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_15, AAA_23, SbcC_Walker_B | 0.50 | 35.0 | 2.13e-01 | 75.8% | 51.3% |
D2
medium
residues 67-123
Domain cluster:
rep: KT626446.1__ALF02558.1__XO26_0051__00051__D110-168
CATH (61)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ecrB03 | 3.30.160.40 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain | 0.71 | 60.0 | 5.03e-01 | 98.2% | 89.2% |
| 2wjsA03 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.70 | 49.0 | 3.49e-01 | 73.7% | 38.5% |
| 2r1bA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.69 | 47.0 | 3.22e-01 | 71.9% | 30.8% |
| 2r16A00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.68 | 48.0 | 3.37e-01 | 73.7% | 34.9% |
| 1pz7A00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.68 | 48.0 | 3.31e-01 | 73.7% | 32.4% |
| 3pveA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.67 | 49.0 | 3.43e-01 | 77.2% | 50.9% |
| 7yh1A01 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.66 | 45.0 | 3.65e-01 | 71.9% | 41.2% |
| 4at7A02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.66 | 46.0 | 3.45e-01 | 73.7% | 53.3% |
| 2e1bA02 | 3.30.980.10 | Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Threonyl-trna Synthetase; Chain A, domain 2 | 0.65 | 45.0 | 3.54e-01 | 73.7% | 92.2% |
| 2pt7C01 | 3.30.450.90 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.65 | 41.0 | 3.40e-01 | 73.7% | 34.9% |
| 7ct3A01 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.63 | 43.0 | 3.54e-01 | 73.7% | 41.9% |
| 1egjA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 44.0 | 3.65e-01 | 73.7% | 86.1% |
| 3ligA02 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.63 | 43.0 | 3.15e-01 | 73.7% | 47.3% |
| 3d1cA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.62 | 46.0 | 3.68e-01 | 80.7% | 92.1% |
| 2ix2B00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.61 | 42.0 | 2.81e-01 | 73.7% | 17.6% |
| 4q0yA00 | 2.60.40.4400 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.61 | 43.0 | 3.40e-01 | 77.2% | 68.7% |
| 3obaA05 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.61 | 44.0 | 2.86e-01 | 80.7% | 99.7% |
| 3mixA01 | 3.40.30.60 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › FHIPEP family, domain 1 | 0.60 | 49.0 | 4.02e-01 | 98.2% | 64.2% |
| 2hc5A01 | 3.30.160.170 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › FlaG-like | 0.60 | 50.0 | 4.35e-01 | 100.0% | 65.3% |
| 2giaB00 | 2.30.31.40 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › | 0.60 | 41.0 | 3.13e-01 | 73.7% | 68.5% |
| 2fpnA01 | 3.30.2030.10 | Alpha Beta › 2-Layer Sandwich › TBP-like › YwmB-like | 0.60 | 51.0 | 3.92e-01 | 100.0% | 62.9% |
| 1ukfA00 | 3.90.70.20 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.60 | 51.0 | 3.69e-01 | 100.0% | 35.6% |
| 2auwA01 | 3.30.2020.10 | Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › NE0471-like N-terminal domain | 0.60 | 41.0 | 3.71e-01 | 71.9% | 96.3% |
| 1vq8E02 | 3.90.930.12 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 | 0.60 | 51.0 | 4.42e-01 | 100.0% | 82.8% |
| 1w97L02 | 3.30.420.370 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › GspL cytoplasmic domain, C-terminal subdomain | 0.59 | 41.0 | 3.83e-01 | 73.7% | 56.0% |
| 4dokA01 | 3.50.70.10 | Alpha Beta › 3-Layer(bba) Sandwich › Chalcone isomerase › | 0.59 | 41.0 | 3.10e-01 | 75.4% | 48.4% |
| 4hs5A00 | 3.30.920.10 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY | 0.58 | 47.0 | 4.07e-01 | 100.0% | 87.6% |
| 3wasA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.58 | 44.0 | 2.69e-01 | 84.2% | 24.4% |
| 1q67A01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.58 | 43.0 | 3.32e-01 | 82.5% | 85.7% |
| 1nkgA01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.57 | 48.0 | 3.23e-01 | 100.0% | 34.7% |
| 2zc0A01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.57 | 48.0 | 3.48e-01 | 100.0% | 52.5% |
| 3hbkA00 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.57 | 41.0 | 2.78e-01 | 78.9% | 34.6% |
| 1vp4B01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.57 | 47.0 | 3.40e-01 | 100.0% | 49.7% |
| 4zm3B01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.57 | 47.0 | 3.67e-01 | 100.0% | 69.7% |
| 2h36X00 | 3.30.160.300 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.57 | 45.0 | 3.82e-01 | 94.7% | 55.6% |
| 1v7wA01 | 2.70.98.40 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain | 0.56 | 50.0 | 3.16e-01 | 100.0% | 64.9% |
| 4upiA01 | 3.40.720.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alkaline Phosphatase, subunit A › Alkaline Phosphatase, subunit A | 0.56 | 43.0 | 2.55e-01 | 86.0% | 91.8% |
| 3awiA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.56 | 40.0 | 2.66e-01 | 77.2% | 53.3% |
| 4jpdA00 | 3.30.920.10 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY | 0.56 | 47.0 | 3.93e-01 | 100.0% | 83.5% |
| 4a18P00 | 3.30.720.90 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.56 | 40.0 | 3.82e-01 | 75.4% | 71.2% |
| 3t32A01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.55 | 45.0 | 3.60e-01 | 100.0% | 68.7% |
| 3dzzA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.55 | 45.0 | 3.55e-01 | 100.0% | 64.8% |
| 1db3A02 | 3.90.25.10 | Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 | 0.55 | 48.0 | 3.83e-01 | 100.0% | 73.3% |
| 2x49A01 | 3.40.30.60 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › FHIPEP family, domain 1 | 0.55 | 43.0 | 3.83e-01 | 96.5% | 69.8% |
| 2lqoA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.55 | 46.0 | 4.05e-01 | 98.2% | 71.6% |
| 4ddpA00 | 1.10.418.40 | Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Autophagy protein 6/Beclin 1 | 0.54 | 45.0 | 3.24e-01 | 100.0% | 99.5% |
| 2nvnA00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.54 | 36.0 | 2.97e-01 | 71.9% | 80.0% |
| 4bjzA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.53 | 45.0 | 3.34e-01 | 98.2% | 74.4% |
| 3v5nB02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.53 | 43.0 | 3.19e-01 | 98.2% | 73.4% |
| 3lxqA01 | 3.30.1120.80 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.53 | 45.0 | 3.76e-01 | 94.7% | 74.7% |
| 3gnnA01 | 3.90.1170.20 | Alpha Beta › Alpha-Beta Complex › Aldehyde Oxidoreductase; domain 3 › Quinolinate phosphoribosyl transferase, N-terminal domain | 0.53 | 44.0 | 3.39e-01 | 94.7% | 60.9% |
| 3cxbA02 | 3.30.390.70 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Salmonella typhimurium protein | 0.53 | 42.0 | 3.48e-01 | 89.5% | 77.4% |
| 2wmmA02 | 3.30.70.3500 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › MukB, hinge domain | 0.52 | 37.0 | 2.93e-01 | 73.7% | 63.7% |
| 3p2mA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.52 | 43.0 | 2.85e-01 | 98.2% | 95.0% |
| 5yrzB00 | 3.30.920.30 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Hypothetical protein. | 0.52 | 41.0 | 4.18e-01 | 98.2% | 96.6% |
| 3gkeA02 | 3.90.380.10 | Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 | 0.52 | 43.0 | 3.05e-01 | 100.0% | 61.9% |
| 1y13A00 | 3.30.479.10 | Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › 6-pyruvoyl tetrahydropterin synthase/QueD | 0.52 | 41.0 | 2.98e-01 | 91.2% | 30.1% |
| 3fvcA01 | 2.30.30.1230 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 36.0 | 3.32e-01 | 75.4% | 61.3% |
| 3ms6A00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.50 | 42.0 | 3.65e-01 | 94.7% | 95.6% |
| 4nswA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.50 | 36.0 | 3.06e-01 | 80.7% | 89.0% |
| 2v43A01 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.50 | 42.0 | 2.99e-01 | 94.7% | 43.2% |
ECOD (68)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3501861 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.82 | 66.0 | 5.35e-01 | 87.7% | 72.4% |
| 3670595 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.76 | 63.0 | 5.37e-01 | 94.7% | 76.8% |
| 5023929 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.76 | 63.0 | 5.52e-01 | 93.0% | 70.6% |
| 4929701 | 4100.1.1.0 ↗ | a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like | 0.73 | 53.0 | 5.30e-01 | 78.9% | 76.7% |
| 4983783 | 873.1.1.20 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › DUF6125 | 0.73 | 51.0 | 3.66e-01 | 73.7% | 62.5% |
| 3765454 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.69 | 47.0 | 3.64e-01 | 71.9% | 49.2% |
| 4946613 | 512.1.1.5 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_3rd | 0.68 | 58.0 | 4.01e-01 | 98.2% | 32.0% |
| 4025792 | 223.2.1.3 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Clat_adaptor_s | 0.68 | 47.0 | 3.45e-01 | 73.7% | 53.7% |
| 4408461 | 71.1.1.3 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB | 0.67 | 49.0 | 3.47e-01 | 78.9% | 36.6% |
| 3268750 | 316.1.1.56 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PF26128 | 0.67 | 46.0 | 3.32e-01 | 73.7% | 24.0% |
| 3510204 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.66 | 45.0 | 2.73e-01 | 71.9% | 17.5% |
| 3461881 | 223.2.1.15 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Longin | 0.65 | 45.0 | 3.57e-01 | 73.7% | 40.0% |
| 4955758 | 2004.1.1.16 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Arf | 0.65 | 53.0 | 3.48e-01 | 96.5% | 24.1% |
| 2389074 | 10.1.1.27 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Alginate_lyase2 | 0.64 | 45.0 | 2.91e-01 | 73.7% | 31.5% |
| 3620221 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.64 | 46.0 | 3.75e-01 | 77.2% | 69.1% |
| 3517889 | 331.23.1.0 ↗ | a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain | 0.64 | 55.0 | 4.61e-01 | 100.0% | 77.9% |
| 3284448 | 873.1.1.7 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › Arabinose_bd | 0.64 | 46.0 | 3.25e-01 | 78.9% | 55.9% |
| 4000169 | 4161.1.1.0 ↗ | beta complex topology › MOSC N-terminal domain-like › MOSC N-terminal domain-like › MOSC N-terminal domain-like | 0.63 | 54.0 | 3.54e-01 | 98.2% | 34.2% |
| 4429302 | 4161.1.1.0 ↗ | beta complex topology › MOSC N-terminal domain-like › MOSC N-terminal domain-like › MOSC N-terminal domain-like | 0.63 | 53.0 | 3.40e-01 | 98.2% | 28.7% |
| 5014724 | 295.1.1.51 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › FtsQ_DivIB_C | 0.62 | 44.0 | 3.69e-01 | 75.4% | 85.0% |
| 4978331 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.62 | 52.0 | 4.89e-01 | 96.5% | 80.0% |
| 4939583 | 512.1.1.2 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd | 0.62 | 52.0 | 3.72e-01 | 98.2% | 32.8% |
| 3228787 | 4161.1.1.0 ↗ | beta complex topology › MOSC N-terminal domain-like › MOSC N-terminal domain-like › MOSC N-terminal domain-like | 0.61 | 52.0 | 3.34e-01 | 98.2% | 28.6% |
| 3838717 | 2004.1.1.42 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE | 0.61 | 43.0 | 2.72e-01 | 75.4% | 14.1% |
| 4064755 | 71.1.1.3 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB | 0.61 | 45.0 | 3.26e-01 | 80.7% | 38.8% |
| 3585077 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.61 | 42.0 | 3.38e-01 | 73.7% | 52.5% |
| 3970136 | 241.2.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like | 0.61 | 50.0 | 4.27e-01 | 100.0% | 89.5% |
| 4269649 | 241.2.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay | 0.61 | 50.0 | 4.20e-01 | 100.0% | 85.5% |
| 3733997 | 241.2.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay | 0.60 | 48.0 | 3.95e-01 | 98.2% | 90.4% |
| 4975637 | 241.2.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like | 0.60 | 49.0 | 4.50e-01 | 98.2% | 97.5% |
| 3495264 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.59 | 42.0 | 3.04e-01 | 77.2% | 48.3% |
| 3702424 | 10.1.1.56 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › TS_C | 0.59 | 41.0 | 3.24e-01 | 73.7% | 47.2% |
| 3705929 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.59 | 41.0 | 2.74e-01 | 73.7% | 45.0% |
| 5011765 | 324.1.1.1 ↗ | a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC | 0.58 | 41.0 | 3.18e-01 | 75.4% | 35.6% |
| 3569168 | 3164.1.1.2 ↗ | few secondary structure elements › Zinc-binding domain in Junin virus envelope glycoprotein › Zinc-binding domain in Junin virus envelope glycoprotein › Zinc-binding domain in Junin virus envelope glycoprotein › SWIM | 0.58 | 45.0 | 3.99e-01 | 86.0% | 88.2% |
| 2099578 | 12.3.1.12 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_transf_36 | 0.58 | 41.0 | 2.50e-01 | 77.2% | 11.1% |
| 3474858 | 719.1.1.1 ↗ | beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › XRCC4 | 0.58 | 44.0 | 3.64e-01 | 84.2% | 94.3% |
| 3188399 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.58 | 49.0 | 3.62e-01 | 98.2% | 81.2% |
| 4143716 | 241.2.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay | 0.57 | 49.0 | 4.03e-01 | 100.0% | 83.6% |
| None | — | 0.57 | 49.0 | 3.06e-01 | 100.0% | 24.5% | |
| 3427234 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.57 | 47.0 | 3.16e-01 | 94.7% | 30.2% |
| 3640334 | 241.2.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like | 0.57 | 48.0 | 3.89e-01 | 98.2% | 86.7% |
| 3288787 | 327.16.1.9 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › DUF6882 | 0.57 | 44.0 | 3.31e-01 | 87.7% | 65.8% |
| 4193772 | 331.1.1.13 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › CPSF73-100_C | 0.56 | 47.0 | 4.22e-01 | 100.0% | 76.5% |
| 5003057 | 243.6.1.0 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain | 0.56 | 45.0 | 4.29e-01 | 94.7% | 90.0% |
| 4928672 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.56 | 45.0 | 3.83e-01 | 98.2% | 87.3% |
| 3806422 | 247.1.1.38 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › CPSF73-100_C | 0.56 | 46.0 | 4.17e-01 | 100.0% | 76.5% |
| 3874132 | 220.1.1.170 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_alsin | 0.55 | 38.0 | 3.18e-01 | 75.4% | 68.7% |
| 4808082 | 241.2.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay | 0.55 | 47.0 | 3.91e-01 | 98.2% | 79.2% |
| 5027344 | 1170.1.1.0 ↗ | beta barrels › IL8-related › IL8-related › IL8 | 0.55 | 39.0 | 4.00e-01 | 75.4% | 81.8% |
| 5031334 | 298.1.1.0 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | 0.55 | 39.0 | 2.90e-01 | 75.4% | 30.2% |
| 3607693 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.54 | 41.0 | 2.63e-01 | 84.2% | 32.1% |
| None | — | 0.54 | 43.0 | 2.66e-01 | 96.5% | 86.0% | |
| 4128787 | 3439.1.1.0 ↗ | a+b two layers › PafA/Dop C-terminal domain › PafA/Dop C-terminal domain › PafA/Dop C-terminal domain | 0.54 | 44.0 | 4.42e-01 | 100.0% | 100.0% |
| 3963351 | 325.1.4.1 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Nicotinate/Quinolinate PRTase N-terminal domain-like › QRPTase_N | 0.54 | 41.0 | 3.30e-01 | 100.0% | 41.7% |
| 3180612 | 2003.1.2.58 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox, Pyr_redox_2 | 0.54 | 39.0 | 2.43e-01 | 80.7% | 80.7% |
| 4991400 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.54 | 43.0 | 3.19e-01 | 100.0% | 83.2% |
| 3951812 | 7579.1.1.44 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_6 | 0.52 | 41.0 | 2.77e-01 | 98.2% | 94.9% |
| 2330317 | 330.7.1.2 ↗ | a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain › HicA_toxin | 0.52 | 41.0 | 4.18e-01 | 98.2% | 96.6% |
| 3604572 | 243.6.1.1 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › DUF1947 | 0.52 | 43.0 | 4.07e-01 | 96.5% | 90.0% |
| 4315725 | 295.1.1.12 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › UPF0231 | 0.52 | 37.0 | 2.96e-01 | 75.4% | 75.0% |
| 5048066 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.52 | 39.0 | 3.28e-01 | 84.2% | 87.6% |
| 4934114 | 243.6.1.0 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain | 0.51 | 41.0 | 3.86e-01 | 96.5% | 88.0% |
| 3617244 | 109.4.1.839 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Maestro_HEAT | 0.51 | 44.0 | 2.70e-01 | 100.0% | 21.1% |
| 3912886 | 633.23.1.1 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › PMP22_Claudin | 0.51 | 42.0 | 3.10e-01 | 100.0% | 76.6% |
| 5051015 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.51 | 45.0 | 3.29e-01 | 100.0% | 85.2% |
| 5073565 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.50 | 41.0 | 3.58e-01 | 93.0% | 98.9% |
| 3472591 | 109.4.1.1578 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF30504 | 0.50 | 36.0 | 2.24e-01 | 77.2% | 26.8% |