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OP484858.1__UYE95908.1__KNLIENLN_00096__00095
Bact-VirOP484858.1__UYE95908.1__KNLIENLN_00096__00095
Identity
- Accession:
- OP484858 ↗
- Kingdom:
- phage
Quality
87.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-51
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2g6zA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.58 | 44.0 | 3.27e-01 | 93.3% | 75.5% |
| 1yfsA01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.53 | 38.0 | 2.59e-01 | 88.9% | 67.4% |
D2
high
residues 64-128
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3zqmA00 | 6.10.140.2160 | Special › Helix non-globular › Helix Hairpins › | 0.61 | 42.0 | 4.35e-01 | 84.6% | 79.7% |
| 1fs7A01 | 1.10.1130.10 | Mainly Alpha › Orthogonal Bundle › Flavocytochrome C3; Chain A, domain 2 › Flavocytochrome C3; Chain A | 0.59 | 39.0 | 2.52e-01 | 72.3% | 14.3% |
| 3pp9B00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.58 | 34.0 | 2.48e-01 | 90.8% | 21.8% |
| 4wksC02 | 2.30.120.10 | Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region | 0.58 | 39.0 | 3.76e-01 | 70.8% | 96.0% |
| 3gw6A03 | 3.30.2460.10 | Alpha Beta › 2-Layer Sandwich › Endo-n-acetylneuraminidase fold › Endo-n-acetylneuraminidase domain | 0.56 | 34.0 | 3.58e-01 | 72.3% | 66.7% |
| 2y3aA01 | 3.10.20.770 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.54 | 46.0 | 3.11e-01 | 100.0% | 51.4% |
| 1vwxP00 | 3.90.470.10 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › Ribosomal protein L22/L17 | 0.53 | 42.0 | 3.19e-01 | 90.8% | 36.6% |
| 3l0aA00 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.53 | 42.0 | 2.79e-01 | 86.2% | 39.1% |
| 3cjlA00 | 3.10.20.850 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Protein of unknown function DUF3861 | 0.52 | 33.0 | 3.07e-01 | 100.0% | 46.6% |
| 3pjvD02 | 6.20.270.20 | Special › Other non-globular › Carboxypeptidase Inhibitor; Chain A › LapD/MoxY periplasmic domain | 0.52 | 35.0 | 3.86e-01 | 83.1% | 94.0% |
| 4wjmA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.51 | 38.0 | 2.47e-01 | 81.5% | 57.7% |
ECOD (33)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3797631 | 210.1.1.0 ↗ | a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits | 0.70 | 45.0 | 3.04e-01 | 80.0% | 17.3% |
| 3406671 | 59.1.1.11 ↗ | beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like › Paf1 | 0.67 | 46.0 | 3.45e-01 | 70.8% | 30.0% |
| 3724623 | 109.4.1.356 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans | 0.64 | 45.0 | 2.65e-01 | 98.5% | 9.8% |
| 4943632 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 49.0 | 4.08e-01 | 87.7% | 83.3% |
| 1834407 | 3218.1.1.1 ↗ | a+b duplicates or obligate multimers › small terminase oligomerization domain › small terminase oligomerization domain › small terminase oligomerization domain › Terminase_2 | 0.61 | 40.0 | 3.86e-01 | 78.5% | 56.4% |
| 4250601 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.60 | 40.0 | 3.03e-01 | 70.8% | 35.9% |
| 1033457 | 3218.1.1.0 ↗ | a+b duplicates or obligate multimers › small terminase oligomerization domain › small terminase oligomerization domain › small terminase oligomerization domain | 0.60 | 41.0 | 4.28e-01 | 84.6% | 81.0% |
| 4955690 | 327.10.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related | 0.60 | 31.0 | 3.05e-01 | 100.0% | 42.9% |
| 4441043 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.59 | 40.0 | 3.03e-01 | 70.8% | 38.1% |
| 4978825 | 101.1.2.30 ↗ | alpha arrays › HTH › HTH › winged helix domain › TrmB | 0.58 | 48.0 | 3.96e-01 | 92.3% | 85.0% |
| 3268288 | 5001.1.1.5 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_3 | 0.58 | 50.0 | 3.34e-01 | 100.0% | 77.2% |
| 3488429 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.57 | 40.0 | 2.99e-01 | 76.9% | 49.7% |
| 4971747 | 101.1.2.30 ↗ | alpha arrays › HTH › HTH › winged helix domain › TrmB | 0.57 | 47.0 | 4.07e-01 | 96.9% | 92.7% |
| 3465836 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 36.0 | 3.18e-01 | 93.8% | 42.0% |
| 3550392 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 40.0 | 2.97e-01 | 76.9% | 50.3% |
| 4944959 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 45.0 | 3.86e-01 | 90.8% | 92.7% |
| 3223233 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.56 | 40.0 | 2.81e-01 | 76.9% | 41.7% |
| 3363114 | 325.1.7.25 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › PORR | 0.56 | 32.0 | 2.86e-01 | 73.8% | 41.1% |
| 3883105 | 3226.1.1.1 ↗ | alpha complex topology › Uracil Transporter UraA › Uracil Transporter UraA › Uracil Transporter UraA › Xan_ur_permease | 0.55 | 42.0 | 2.58e-01 | 89.2% | 11.4% |
| 4033997 | 4070.1.1.3 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › DUF3267 | 0.55 | 38.0 | 3.00e-01 | 73.8% | 89.7% |
| 3602715 | 101.1.2.30 ↗ | alpha arrays › HTH › HTH › winged helix domain › TrmB | 0.55 | 46.0 | 3.76e-01 | 95.4% | 79.2% |
| 4948149 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 41.0 | 3.53e-01 | 86.2% | 84.5% |
| 3798928 | 59.1.4.2 ↗ | beta complex topology › triple barrel › triple barrel › TFIID subunits TAF1-TAF7 › DUF3591 | 0.53 | 45.0 | 2.78e-01 | 100.0% | 64.5% |
| 4245032 | 192.11.1.2 ↗ | alpha bundles › Long alpha-hairpin › C-terminal UvrC-binding domain of UvrB › C-terminal UvrC-binding domain of UvrB › CysS_C | 0.53 | 45.0 | 3.24e-01 | 100.0% | 42.9% |
| 4973377 | 3110.1.1.0 ↗ | a/b three-layered sandwiches › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain | 0.53 | 40.0 | 2.98e-01 | 81.5% | 54.7% |
| 1211453 | 2498.1.1.23 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M49 | 0.52 | 41.0 | 2.44e-01 | 98.5% | 37.5% |
| 3636403 | 4001.1.1.4 ↗ | a+b duplicates or obligate multimers › a+b domain in cullin-like proteins › a+b domain in cullin-like proteins › a+b domain in cullin-like proteins › Cullin_AB | 0.51 | 34.0 | 2.84e-01 | 89.2% | 34.6% |
| 4002132 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.51 | 41.0 | 2.74e-01 | 95.4% | 84.0% |
| 3697137 | 5050.1.1.1 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Sugar_tr | 0.51 | 43.0 | 2.98e-01 | 98.5% | 49.6% |
| 4523828 | 101.26.1.2 ↗ | alpha arrays › HTH › Tex N-terminal domain › Tex N-terminal domain › HTH_44 | 0.50 | 41.0 | 3.38e-01 | 100.0% | 84.3% |
| 4025375 | 2008.1.1.86 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAP | 0.50 | 35.0 | 3.02e-01 | 75.4% | 54.8% |
| 415845 | 101.1.2.214 ↗ | alpha arrays › HTH › HTH › winged helix domain › DnaD_N | 0.50 | 41.0 | 3.43e-01 | 95.4% | 81.3% |
| 3483425 | 3745.1.1.0 ↗ | alpha bundles › Sodium/Calcium exchanger › Sodium/Calcium exchanger › Sodium/Calcium exchanger | 0.50 | 42.0 | 2.62e-01 | 100.0% | 56.7% |