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OP491958.1__UZV39708.1__APT65_00105__00093
Bact-VirOP491958.1__UZV39708.1__APT65_00105__00093
Identity
- Accession:
- OP491958 ↗
- Kingdom:
- phage
Quality
65.1
mean pLDDT
Taxonomy
TaxID: 3432974
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-274
Domain cluster:
rep: OP830906.1__WBF78058.1__MEP401_gp05__00005__D296-546
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF12224.14 best | Amidoligase_2 | 33.2 | 7.10e-08 | 61.0% | 56.7% |
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1r8gA00 | 3.30.590.20 | Alpha Beta › 2-Layer Sandwich › Creatine Kinase; Chain A, domain 2 › | 0.71 | 64.0 | 5.73e-01 | 92.6% | 91.8% |
| 4nzdB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 23.0 | 3.67e-01 | 81.8% | 92.9% |
| 1xauA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 23.0 | 3.63e-01 | 81.4% | 91.3% |
| 1c16A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 22.0 | 3.59e-01 | 86.6% | 92.8% |
| 1p5dX04 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.58 | 21.0 | 3.57e-01 | 70.3% | 94.6% |
| 4dezA01 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.58 | 24.0 | 3.76e-01 | 74.3% | 100.0% |
| 3o1lB01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.57 | 21.0 | 3.61e-01 | 76.2% | 100.0% |
| 2gysA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 20.0 | 3.60e-01 | 82.2% | 100.0% |
| 1ix2A00 | 2.60.40.1220 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 23.0 | 3.63e-01 | 81.8% | 95.1% |
| 1o0vA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 24.0 | 3.57e-01 | 86.6% | 90.0% |
| 6efyA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 22.0 | 3.51e-01 | 81.4% | 92.9% |
| 2cryA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 23.0 | 3.57e-01 | 89.2% | 95.1% |
| 2i53A01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.55 | 25.0 | 3.35e-01 | 92.9% | 76.9% |
| 3kavA00 | 1.20.1270.360 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.55 | 22.0 | 3.50e-01 | 79.2% | 94.1% |
| 3x17A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 22.0 | 3.44e-01 | 81.8% | 93.1% |
| 4of8A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 22.0 | 3.46e-01 | 86.6% | 94.2% |
| 1sq2N00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 23.0 | 3.49e-01 | 81.4% | 94.6% |
| 4ofdB02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 19.0 | 3.17e-01 | 70.6% | 89.5% |
| 2ednA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 23.0 | 3.34e-01 | 86.6% | 88.1% |
| 1wzlA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 24.0 | 3.45e-01 | 82.9% | 90.9% |
| 2fgeA02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.52 | 34.0 | 3.64e-01 | 98.9% | 73.2% |
| 3zxaC02 | 2.60.40.3420 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 21.0 | 3.26e-01 | 75.1% | 92.5% |
| 2eefA01 | 2.60.40.2440 | Mainly Beta › Sandwich › Immunoglobulin-like › Carbohydrate binding type-21 domain | 0.51 | 23.0 | 3.30e-01 | 86.2% | 87.4% |
| 2zaiB03 | 2.60.40.3020 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 23.0 | 3.36e-01 | 82.5% | 96.3% |
| 1gsoA04 | 3.90.600.10 | Alpha Beta › Alpha-Beta Complex › Glycinamide Ribonucleotide Synthetase; Chain A, domain 4 › Phosphoribosylglycinamide synthetase, C-terminal domain | 0.51 | 20.0 | 3.28e-01 | 80.3% | 100.0% |
| 3l81A02 | 2.60.40.1170 | Mainly Beta › Sandwich › Immunoglobulin-like › Mu homology domain, subdomain B | 0.51 | 23.0 | 3.40e-01 | 81.8% | 99.1% |
| 2c5dC01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 21.0 | 3.20e-01 | 84.8% | 93.3% |
| 1h6eA02 | 2.60.40.1170 | Mainly Beta › Sandwich › Immunoglobulin-like › Mu homology domain, subdomain B | 0.50 | 22.0 | 3.30e-01 | 82.2% | 98.1% |
ECOD (40)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3187412 | 321.1.1.10 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › Amidoligase_2 | 0.84 | 69.0 | 6.32e-01 | 84.4% | 100.0% |
| 4014087 | 321.1.1.0 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase | 0.84 | 70.0 | 6.40e-01 | 85.1% | 93.1% |
| 3192908 | 321.1.1.10 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › Amidoligase_2 | 0.83 | 70.0 | 6.32e-01 | 85.9% | 99.7% |
| 4014247 | 321.1.1.0 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase | 0.83 | 69.0 | 6.08e-01 | 85.5% | 99.7% |
| 3191600 | 321.1.1.0 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase | 0.82 | 61.0 | 6.44e-01 | 75.5% | 100.0% |
| 3723519 | 321.1.1.10 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › Amidoligase_2 | 0.80 | 69.0 | 6.13e-01 | 89.2% | 97.3% |
| 3735130 | 321.1.1.10 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › Amidoligase_2 | 0.80 | 70.0 | 5.79e-01 | 91.1% | 98.9% |
| 3194430 | 321.1.1.10 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › Amidoligase_2 | 0.79 | 69.0 | 6.23e-01 | 90.0% | 99.7% |
| 5044400 | 321.1.1.0 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase | 0.78 | 66.0 | 5.38e-01 | 87.0% | 90.5% |
| 5076798 | 321.1.1.7 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › GCS2 | 0.77 | 64.0 | 5.36e-01 | 86.6% | 90.6% |
| 4998366 | 321.1.1.7 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › GCS2 | 0.75 | 63.0 | 5.77e-01 | 86.6% | 96.8% |
| 5023855 | 321.1.1.0 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase | 0.75 | 63.0 | 5.47e-01 | 86.6% | 90.5% |
| 5000177 | 321.1.1.7 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › GCS2 | 0.75 | 63.0 | 5.65e-01 | 86.6% | 91.8% |
| 4971846 | 321.1.1.7 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › GCS2 | 0.75 | 63.0 | 5.59e-01 | 86.6% | 96.4% |
| 3685180 | 321.1.1.0 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase | 0.75 | 63.0 | 5.48e-01 | 86.2% | 97.1% |
| 4045403 | 321.1.1.7 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › GCS2 | 0.74 | 61.0 | 5.39e-01 | 84.0% | 91.9% |
| 4450157 | 321.1.1.7 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › GCS2 | 0.73 | 62.0 | 5.49e-01 | 86.2% | 90.9% |
| 4183191 | 321.1.1.7 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › GCS2 | 0.73 | 59.0 | 5.19e-01 | 83.6% | 90.6% |
| 4659512 | 321.1.1.7 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › GCS2 | 0.73 | 62.0 | 5.45e-01 | 87.4% | 89.9% |
| 4665948 | 321.1.1.0 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase | 0.73 | 62.0 | 5.49e-01 | 88.1% | 91.6% |
| 4253460 | 321.1.1.7 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › GCS2 | 0.72 | 61.0 | 5.40e-01 | 87.7% | 88.3% |
| 5039266 | 321.1.1.7 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › GCS2 | 0.72 | 64.0 | 5.61e-01 | 91.8% | 91.5% |
| 4086700 | 321.1.1.7 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › GCS2 | 0.72 | 63.0 | 5.62e-01 | 91.4% | 91.4% |
| 4109408 | 321.1.1.7 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › GCS2 | 0.71 | 63.0 | 5.57e-01 | 91.4% | 91.4% |
| 3291238 | 321.1.1.7 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › GCS2 | 0.71 | 60.0 | 5.34e-01 | 87.0% | 92.1% |
| 4441942 | 321.1.1.7 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › GCS2 | 0.71 | 63.0 | 5.54e-01 | 91.8% | 92.4% |
| 4616960 | 321.1.1.7 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › GCS2 | 0.71 | 59.0 | 5.28e-01 | 87.0% | 89.7% |
| 4528253 | 321.1.1.7 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › GCS2 | 0.70 | 61.0 | 5.37e-01 | 88.8% | 90.3% |
| 4090827 | 321.1.1.7 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › GCS2 | 0.70 | 61.0 | 5.45e-01 | 90.7% | 90.8% |
| 4643240 | 321.1.1.7 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › GCS2 | 0.70 | 61.0 | 5.49e-01 | 91.8% | 92.1% |
| 4194780 | 321.1.1.7 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › GCS2 | 0.70 | 62.0 | 5.39e-01 | 92.2% | 88.1% |
| 5039184 | 321.1.1.6 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › Pup_ligase | 0.66 | 56.0 | 4.89e-01 | 87.7% | 78.9% |
| 3934401 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 24.0 | 3.61e-01 | 90.3% | 88.2% |
| 3851190 | 11.1.1.178 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_2 | 0.58 | 23.0 | 3.61e-01 | 81.4% | 90.5% |
| 3261996 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 23.0 | 3.14e-01 | 81.8% | 75.6% |
| 3247934 | 1.1.7.41 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › UPF1_1B_dom | 0.54 | 20.0 | 3.31e-01 | 89.6% | 93.7% |
| 4986508 | 5067.1.1.4 ↗ | alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › MMPL | 0.53 | 32.0 | 2.92e-01 | 70.3% | 41.6% |
| 3929182 | 11.1.1.108 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 | 0.53 | 23.0 | 3.39e-01 | 86.6% | 93.6% |
| None | — | 0.52 | 21.0 | 3.27e-01 | 81.4% | 92.4% | |
| 3829376 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.51 | 27.0 | 3.57e-01 | 79.2% | 93.1% |