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OP495736.1__UYE92018.1__KJBENDCP_00048__00048
Bact-VirOP495736.1__UYE92018.1__KJBENDCP_00048__00048
Identity
- Accession:
- OP495736 ↗
- Kingdom:
- phage
Quality
86.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-82
Domain cluster:
representative
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ig8A02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.67 | 51.0 | 4.35e-01 | 82.7% | 95.5% |
| 6r2nA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.66 | 51.0 | 4.28e-01 | 84.0% | 97.1% |
| 1bdgA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.64 | 49.0 | 3.93e-01 | 82.7% | 77.4% |
| 4jn7A01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.63 | 40.0 | 3.55e-01 | 84.0% | 43.7% |
| 3msyA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.59 | 38.0 | 3.44e-01 | 84.0% | 47.7% |
| 2e11A00 | 3.60.110.10 | Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase | 0.57 | 49.0 | 3.48e-01 | 96.3% | 85.7% |
| 3nqhA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.55 | 48.0 | 3.30e-01 | 100.0% | 55.1% |
| 4g79A00 | 2.170.210.20 | Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › Spindle assembly abnormal protein 6, N-terminal domain | 0.55 | 45.0 | 3.86e-01 | 91.4% | 68.7% |
| 4dm5A00 | 3.30.1450.10 | Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › | 0.54 | 33.0 | 3.30e-01 | 85.2% | 57.5% |
| 4exrA01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 35.0 | 3.55e-01 | 72.8% | 66.7% |
| 2gfgA00 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.53 | 46.0 | 3.59e-01 | 100.0% | 79.6% |
| 4qi3A00 | 2.60.40.1210 | Mainly Beta › Sandwich › Immunoglobulin-like › Cellobiose dehydrogenase, cytochrome domain | 0.53 | 46.0 | 3.49e-01 | 100.0% | 58.0% |
| 2vrsA03 | 2.60.90.40 | Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › | 0.53 | 38.0 | 3.20e-01 | 86.4% | 46.2% |
| 3f6gA02 | 3.30.160.340 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.52 | 37.0 | 4.09e-01 | 86.4% | 95.2% |
| 8aa0E01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.52 | 45.0 | 3.13e-01 | 100.0% | 63.4% |
| 4bg7A00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.52 | 46.0 | 4.34e-01 | 100.0% | 85.7% |
| 2jobA00 | 3.30.160.320 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.52 | 45.0 | 4.22e-01 | 100.0% | 83.3% |
| 1vprA03 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.51 | 34.0 | 2.80e-01 | 84.0% | 35.0% |
| 6f1uK02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.51 | 39.0 | 3.32e-01 | 85.2% | 78.6% |
| 3k44B00 | 3.30.2450.30 | Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › | 0.50 | 42.0 | 3.64e-01 | 97.5% | 92.1% |
| 3pieB05 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.50 | 32.0 | 3.56e-01 | 96.3% | 82.8% |
| 3l9rA01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.50 | 36.0 | 2.91e-01 | 77.8% | 89.1% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3968468 | 4152.2.1.0 ↗ | a+b two layers › Shew3726-like › Uncharacterized protein CV_2116 › Uncharacterized protein CV_2116 | 0.67 | 49.0 | 5.12e-01 | 85.2% | 85.3% |
| 4144852 | 220.1.1.126 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Ycf4 | 0.65 | 45.0 | 4.06e-01 | 76.5% | 53.7% |
| 3321360 | 4210.1.1.1 ↗ | a+b two layers › WGR domain › WGR domain › WGR domain › WGR | 0.64 | 46.0 | 4.78e-01 | 96.3% | 82.7% |
| 3230630 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.60 | 46.0 | 3.10e-01 | 84.0% | 21.7% |
| 3812180 | 3257.1.1.1 ↗ | a+b complex topology › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Syja_N | 0.60 | 45.0 | 3.29e-01 | 97.5% | 28.1% |
| 4294687 | 2484.1.1.174 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH | 0.59 | 45.0 | 4.10e-01 | 84.0% | 75.7% |
| 4938125 | 896.1.1.0 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related | 0.59 | 41.0 | 4.06e-01 | 71.6% | 70.6% |
| 3597078 | 10.1.1.35 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 | 0.59 | 52.0 | 3.96e-01 | 100.0% | 72.8% |
| 4221376 | 2484.1.1.174 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH | 0.58 | 46.0 | 4.05e-01 | 88.9% | 80.0% |
| 3685667 | 4210.1.1.1 ↗ | a+b two layers › WGR domain › WGR domain › WGR domain › WGR | 0.58 | 51.0 | 4.51e-01 | 100.0% | 71.7% |
| 3924939 | 4210.1.1.1 ↗ | a+b two layers › WGR domain › WGR domain › WGR domain › WGR | 0.58 | 48.0 | 4.34e-01 | 100.0% | 66.1% |
| 4955671 | 7089.1.1.0 ↗ | a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD | 0.57 | 47.0 | 4.82e-01 | 90.1% | 90.0% |
| 3592741 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.57 | 48.0 | 4.74e-01 | 98.8% | 90.6% |
| 3866573 | 12.3.1.42 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › DUF2152 | 0.57 | 42.0 | 2.88e-01 | 77.8% | 55.6% |
| 3615641 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.57 | 43.0 | 4.31e-01 | 87.7% | 80.0% |
| 3449739 | 207.1.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1 | 0.57 | 38.0 | 2.45e-01 | 70.4% | 16.9% |
| 3791220 | 4210.1.1.1 ↗ | a+b two layers › WGR domain › WGR domain › WGR domain › WGR | 0.57 | 50.0 | 4.36e-01 | 100.0% | 72.6% |
| 3228242 | 4210.1.1.1 ↗ | a+b two layers › WGR domain › WGR domain › WGR domain › WGR | 0.56 | 49.0 | 4.62e-01 | 100.0% | 86.0% |
| 2410020 | 881.1.1.4 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › DcrB | 0.56 | 43.0 | 3.55e-01 | 86.4% | 45.3% |
| 4557706 | 2484.1.1.174 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH | 0.56 | 42.0 | 3.56e-01 | 82.7% | 71.7% |
| 3245971 | 11.10.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like | 0.55 | 43.0 | 3.50e-01 | 85.2% | 68.4% |
| 3506982 | 7525.1.1.2 ↗ | a/b three-layered sandwiches › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › His_Phos_2 | 0.55 | 43.0 | 2.92e-01 | 88.9% | 97.1% |
| 3924597 | 330.16.1.0 ↗ | a+b two layers › dsRBD-like › ODA16 N-terminal domain › ODA16 N-terminal domain | 0.55 | 39.0 | 4.08e-01 | 95.1% | 87.1% |
| 3272624 | 4210.1.1.1 ↗ | a+b two layers › WGR domain › WGR domain › WGR domain › WGR | 0.54 | 47.0 | 4.10e-01 | 100.0% | 70.0% |
| 3874674 | 214.1.1.7 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2_1 | 0.54 | 40.0 | 3.48e-01 | 100.0% | 50.4% |
| 5022885 | 5.1.4.43 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › FG-GAP_3 | 0.54 | 47.0 | 2.98e-01 | 100.0% | 68.8% |
| 3501861 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.54 | 44.0 | 4.08e-01 | 96.3% | 69.5% |
| 3676182 | 5.1.2.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_32N | 0.54 | 47.0 | 3.11e-01 | 100.0% | 51.0% |
| 4206673 | 2484.1.1.174 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH | 0.54 | 44.0 | 3.88e-01 | 92.6% | 75.2% |
| 4528700 | 7503.1.1.0 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain | 0.53 | 42.0 | 3.65e-01 | 87.7% | 94.6% |
| 3750853 | 330.1.1.18 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DSRM_DHX29 | 0.52 | 42.0 | 3.81e-01 | 93.8% | 66.7% |
| 3783352 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.52 | 41.0 | 2.70e-01 | 90.1% | 56.1% |
| 3974494 | 330.1.1.34 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DUF6348 | 0.52 | 41.0 | 3.97e-01 | 91.4% | 87.4% |
| 4953273 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.51 | 37.0 | 3.18e-01 | 85.2% | 45.0% |
| 3936392 | 101.1.12.3 ↗ | alpha arrays › HTH › HTH › HTH motif inserted in other structures › SAS-6_N | 0.51 | 43.0 | 3.55e-01 | 95.1% | 60.6% |
| 3364063 | 295.1.1.3 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA | 0.51 | 43.0 | 3.70e-01 | 97.5% | 87.1% |
| 3514912 | 284.1.3.0 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain | 0.51 | 38.0 | 3.98e-01 | 96.3% | 89.3% |
| 4967986 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.51 | 43.0 | 3.45e-01 | 93.8% | 72.1% |
| 3684521 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.51 | 45.0 | 3.10e-01 | 100.0% | 78.3% |
| 3698019 | 11.8.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Osmotin-like › Osmotin-like | 0.51 | 42.0 | 3.49e-01 | 91.4% | 56.6% |
| 3980078 | 274.1.1.24 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits › T2SSppdC | 0.50 | 29.0 | 3.10e-01 | 77.8% | 62.9% |