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OP534061.1__UYE92576.1__H1_156__00156
Bact-VirOP534061.1__UYE92576.1__H1_156__00156
Identity
- Accession:
- OP534061 ↗
- Kingdom:
- phage
Quality
75.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-57
Domain cluster:
representative
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4hbzA00 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.67 | 49.0 | 3.50e-01 | 79.6% | 80.2% |
| 3ga8A00 | 3.10.20.860 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.65 | 51.0 | 4.84e-01 | 90.7% | 79.1% |
| 2r44A03 | 1.10.8.80 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Magnesium chelatase subunit I, C-Terminal domain | 0.62 | 48.0 | 3.71e-01 | 85.2% | 55.1% |
| 2i4lB02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.60 | 45.0 | 3.64e-01 | 81.5% | 57.4% |
| 3ohsX02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.58 | 48.0 | 3.21e-01 | 90.7% | 91.9% |
| 4y97D00 | 1.10.3200.20 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af0941 › DNA Polymerase alpha, zinc finger | 0.57 | 40.0 | 2.84e-01 | 75.9% | 37.1% |
| 2ayaA00 | 3.30.300.150 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › DNA polymerase III, tau subunit, domain V | 0.56 | 40.0 | 3.05e-01 | 75.9% | 46.9% |
| 4eadA02 | 3.40.1030.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pyrimidine Nucleoside Phosphorylase; Chain A, domain 2 › Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain | 0.56 | 45.0 | 3.05e-01 | 92.6% | 70.3% |
| 4g1iA03 | 3.30.70.1770 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 43.0 | 3.94e-01 | 92.6% | 65.2% |
| 3wxmB02 | 3.30.420.60 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 | 0.55 | 43.0 | 3.36e-01 | 87.0% | 44.3% |
| 4pv6A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.55 | 43.0 | 3.08e-01 | 85.2% | 56.5% |
| 3n4pC00 | 3.30.420.320 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › DNA-packaging terminase, C-terminal nuclease domain | 0.54 | 45.0 | 3.06e-01 | 92.6% | 82.1% |
| 2dznF00 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.54 | 48.0 | 4.44e-01 | 100.0% | 81.2% |
| 3frmA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.54 | 43.0 | 2.76e-01 | 88.9% | 18.7% |
| 4ia6B01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.53 | 38.0 | 2.49e-01 | 81.5% | 18.2% |
| 4e2aA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.53 | 42.0 | 2.94e-01 | 87.0% | 64.1% |
| 1c16A01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.52 | 44.0 | 3.21e-01 | 96.3% | 55.8% |
| 3aj3A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.52 | 47.0 | 2.95e-01 | 100.0% | 85.0% |
| 1xmtA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.51 | 38.0 | 3.20e-01 | 81.5% | 61.1% |
| 1f32A01 | 3.30.1120.50 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › Pepsin inhibitor-3 | 0.51 | 42.0 | 3.94e-01 | 90.7% | 86.6% |
| 2ocaA03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 45.0 | 2.98e-01 | 98.1% | 79.8% |
ECOD (38)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4992532 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.86 | 68.0 | 6.55e-01 | 85.2% | 80.0% |
| 4968137 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.81 | 66.0 | 6.56e-01 | 90.7% | 87.3% |
| 4993925 | 375.1.1.338 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF7479 | 0.81 | 57.0 | 5.86e-01 | 74.1% | 80.0% |
| 4947479 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.80 | 57.0 | 5.93e-01 | 75.9% | 82.0% |
| 4968450 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.78 | 60.0 | 6.06e-01 | 87.0% | 85.5% |
| 4661366 | 375.1.1.271 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › YokU | 0.77 | 67.0 | 6.07e-01 | 100.0% | 81.3% |
| 4992806 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.76 | 60.0 | 6.01e-01 | 87.0% | 85.5% |
| 5061538 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.75 | 57.0 | 5.71e-01 | 85.2% | 81.8% |
| 5030510 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.75 | 53.0 | 5.45e-01 | 77.8% | 82.0% |
| 5081200 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.73 | 57.0 | 5.57e-01 | 87.0% | 78.3% |
| 5005640 | 3604.1.1.1 ↗ | a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Ni_insertion | 0.72 | 53.0 | 5.02e-01 | 79.6% | 66.2% |
| 380878 | 375.1.1.55 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › MqsA_antitoxin | 0.67 | 52.0 | 4.87e-01 | 90.7% | 75.7% |
| 4147215 | 327.4.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › YhbC-like, N-terminal domain › YhbC-like, N-terminal domain › RimP_N | 0.66 | 47.0 | 3.89e-01 | 75.9% | 72.6% |
| 4943615 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.64 | 49.0 | 3.98e-01 | 81.5% | 56.8% |
| 4369577 | 3604.1.1.1 ↗ | a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Ni_insertion | 0.62 | 44.0 | 4.34e-01 | 81.5% | 70.0% |
| 5014662 | 327.6.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Fe-S cluster assembly (FSCA) domain-like › Fe-S cluster assembly (FSCA) domain-like › FeS_assembly_P | 0.61 | 43.0 | 3.63e-01 | 74.1% | 77.8% |
| 4179711 | 244.1.1.10 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › MCRA | 0.61 | 46.0 | 2.71e-01 | 81.5% | 87.4% |
| 4591781 | 2004.1.1.1117 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF2478 | 0.61 | 50.0 | 3.61e-01 | 96.3% | 30.6% |
| 4024609 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.61 | 52.0 | 3.42e-01 | 98.1% | 70.8% |
| 4025907 | 304.48.1.4 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Guanylate_cyc | 0.61 | 49.0 | 3.19e-01 | 100.0% | 60.7% |
| 4308725 | 304.48.1.4 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Guanylate_cyc | 0.60 | 48.0 | 3.37e-01 | 100.0% | 67.9% |
| 3603126 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.60 | 47.0 | 3.16e-01 | 87.0% | 100.0% |
| 4283958 | 2003.1.2.23 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › MCRA | 0.59 | 45.0 | 2.58e-01 | 81.5% | 82.3% |
| 3971309 | 213.1.1.3 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Autoind_synth | 0.58 | 44.0 | 2.93e-01 | 79.6% | 22.0% |
| 5014447 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.58 | 51.0 | 3.32e-01 | 98.1% | 29.6% |
| 4928575 | 2002.3.1.2 ↗ | a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Polysacc_deac_1 | 0.58 | 46.0 | 3.08e-01 | 90.7% | 93.7% |
| 3798608 | 2492.1.1.4 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.57 | 47.0 | 2.84e-01 | 88.9% | 18.5% |
| 5037858 | 2484.2.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Methylated DNA-protein cysteine methyltransferase domain › Methylated DNA-protein cysteine methyltransferase domain | 0.57 | 44.0 | 4.14e-01 | 88.9% | 85.7% |
| 3590848 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.53 | 43.0 | 2.89e-01 | 98.1% | 25.3% |
| 5015261 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.52 | 40.0 | 2.61e-01 | 81.5% | 27.1% |
| 3940687 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.52 | 40.0 | 3.42e-01 | 90.7% | 49.0% |
| 4950145 | 9.1.1.4 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › META | 0.52 | 42.0 | 3.23e-01 | 90.7% | 86.3% |
| 3929484 | 2008.6.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Acetyl-CoA carboxylase AC4 and AC5 domains › Acetyl-CoA carboxylase AC4 and AC5 domains | 0.51 | 40.0 | 2.64e-01 | 87.0% | 37.0% |
| 4171356 | 2495.1.1.0 ↗ | a/b three-layered sandwiches › Cell-division inhibitor MinC, N-terminal domain › Cell-division inhibitor MinC, N-terminal domain › Cell-division inhibitor MinC, N-terminal domain | 0.51 | 39.0 | 3.16e-01 | 85.2% | 78.2% |
| 4940747 | 275.1.1.0 ↗ | a+b two layers › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase | 0.51 | 39.0 | 3.53e-01 | 88.9% | 61.3% |
| 4078886 | 314.1.1.2 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2b | 0.51 | 45.0 | 2.72e-01 | 100.0% | 82.4% |
| 3277758 | 213.1.1.35 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_CG | 0.51 | 39.0 | 3.26e-01 | 92.6% | 46.9% |
| 5013995 | 148.1.3.17 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid | 0.50 | 43.0 | 3.73e-01 | 96.3% | 94.1% |